mRNA_H-elongata_contig6504.14092.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 1.690e-141 Identity = 224/411 (54.50%), Postives = 291/411 (70.80%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVP-VRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYAHRLAHLAIADAP 1373
RGISLM T LK+L +I+STRLN AFE+ LFS++QAGFR REECV Q+ACLLEI +RRK YL+F+DLKKAYD VPQEAL AKL FYGVRG L FIR LY+ S+I VR G +++ L RGVRQGCPLSPVLFNIFIN ++DGA+ GVP V Q IP L+FADDLV +S +R + M ++ W ENEM GI KC +M + R L++ PD+W++AGE +P+V YT L L F L V ++ ++A G++LV +TP+L R IPVP+KVA+VRGV++PRLLFGAEV+GM +IT ++V +N+ +RMV GM+ +T+ + A+WRE+ PPICA AAARRAR +QK KL+TW+ ++ +P+KH+ TW TG WMN Y+HRLA D P
Sbjct: 583 RGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLP 993
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A2R5FKX6_9STRA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FKX6_9STRA) HSP 1 Score: 260 bits (665), Expect = 2.970e-76 Identity = 142/365 (38.90%), Postives = 211/365 (57.81%), Query Frame = 3
Query: 270 ECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*--TVTEP-ADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRM--QGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKC-RKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYAHRL 1346
EC Q A LLE+ +RR++ LLFID+KKAYD VP AL KL GVRG L F++ LY+ S+++VR G + P A L RG+RQGCPLSP LFN+FIN + DG + GV R +G IP L+FADDLV+ GI ++ W +NE++VG KC + + + ++ + G VP+V YT L L +L +++R+A+ +RL ++ FLR + +P+ + A+ R V+IP + +GAE++ NK+ T + +N +++ G+ R + A+W E G PP+CA A +RAR L K R+LRTW+ +VE +K + TW+T W+NT+ HRL
Sbjct: 1 ECAAQVAALLEVCKRRRIEKRDIVLLFIDVKKAYDSVPHGALFFKLAKAGVRGPILAFVKALYAGSKMRVRTGYDPAILSPVAHLRRGLRQGCPLSPTLFNVFINDIFDGHEDLGVLARYHWRGTDGLRIPGLLFADDLVSFIEDAAGIRPAVERLETWLNDNELQVGHHKCGFLKMGRVPG-FEEAVAAAPLQGAAVPIVESYTYLGLEIRPDLSRQGTIADRLAKARRLAGSMHSFLRRQDVPIQFRTAVARTVLIPAITYGAEIFAFNKSFTRGAQQFINTQLKLIAGVARGQAVSNVALWHEFGVPPLCATANGQRARLLSKGGRELRTWLAKMVERGYKARRTTWITNARRWLNTHTHRL 364
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 264 bits (675), Expect = 3.890e-75 Identity = 152/417 (36.45%), Postives = 233/417 (55.88%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*T---VTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPV-----RMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSV--LQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAI-TESMEVLLNQVWRMVGGMNRNST-ILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYAHRLAHLA 1358
RGIS+M +KLL +++ RL + L + Q GF EEC Q A + +I RR+ +GLPTY FIDL+KAYD +P E L +KL+ G+ G L F++ LY S +QV+ G +++P + RG+RQGCP SP+LFNIFIN + DG + G V + +P +FADD V L+ S + M + W ++ M G++KC +M + + V L++ D+WQ+ GE VPVVSEY L +L + I+ +RV + +R V+ L L R IP+ ++ ++++ ++P L +G EV+GM+ ++ +LNQ R + G+ + + T + RE+G PI AMAAA R RA K L T + LV +P + + TW +G W++ +A A LA
Sbjct: 478 RGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASAELA 894
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 265 bits (676), Expect = 1.840e-74 Identity = 161/405 (39.75%), Postives = 229/405 (56.54%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKA--GLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTE---PADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRMQGGVKSH-IPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQT-PDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLL-NQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTY 1334
RGISL+ LKLL I++ RL + K QAGFR REEC+ L E+ RRR++M LP+YL FIDLKKAYD VP AL KL+ GVRG+ L FI+ LY S + R PA L RG+RQGCP+SP+LFN+FIN ++D GV V G +S + L+FADDLV LS +++ +T+W + EM+ G+ KC +M ++ P S L DQW + G+PVP+V EY L +L + + RV K+ + +++PFL R IP+ ++ + +V P L+GAE++G+ + T + L N + R+ G T + RE+ PP+ A+AAARR RA K L+TWV L + P + + KTW+TG W+ +
Sbjct: 775 RGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHV--PGLPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAG-------TYTGTLARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRF 1170
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A0R0LX01_9MICR (RNA-directed DNA polymerase, Non LTR Retrotransposon n=1 Tax=Pseudoloma neurophilia TaxID=146866 RepID=A0A0R0LX01_9MICR) HSP 1 Score: 244 bits (623), Expect = 5.000e-71 Identity = 148/416 (35.58%), Postives = 224/416 (53.85%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYAHRLAHLAIADAPEGIKEA 1391
RGISL++T K+LT I++ R+ E+ L QAGFRR EECV + L EI RRR+L G TY F+D KAYD VP L+ KL YG G+ L + +Y R VR+G ++ D GVRQGCP SP+LFN++IN ++DG SGV + GG+ IP L+FADD V L+ S ++ ++ W +M + + KC ++V V Q ++G + ++S+YT L L T +L + I+++R + +L PFL R +P ++ +VR V++P +G E+YGM+ A ++ ++++ R + G + N A + E+ P + A RARA+ K RT + L+ PFK + TW+TG W+ T H AP G++EA
Sbjct: 8 RGISLISTCCKILTKIVANRVASISEENSLLRNEQAGFRRLEECVAYATSLYEIARRRRLKGDATYAAFLDFSKAYDRVPHRGLLCKLRTYGFHGKLLRVLEAMYENPRASVRIGNDRSDSFDYAIGVRQGCPASPILFNLYINDLLDGL--SGVEI---GGLT--IPGLLFADDAVILAESPQALQEDLNRIDEWCGRWKMSLNVSKCGVVVFGPEDGV------QLSVSGSEIAMLSQYTYLGLPMTADLDLEAIVADRKEKATSAYHSLRPFLLRRHVPAVIRAQIVRAVLVPIATYGCELYGMSSARLHPLQRVIDRAIRDILGCSSN--YCRKAAYEELRIPSMALRGAKLRARAITKWSSSRTTIGSLLCSPFKDRSATWMTGTQRWLKTLLH-------TTAPTGVREA 401
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A0F9ZBM3_9MICR (Endonuclease-reverse transcriptase n=2 Tax=Nosema ceranae TaxID=40302 RepID=A0A0F9ZBM3_9MICR) HSP 1 Score: 248 bits (633), Expect = 1.130e-69 Identity = 146/414 (35.27%), Postives = 230/414 (55.56%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVV----------------NKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYA 1337
RGI+L+ + K++ I + R++ E GL +K QAGFR EEC Q A L E+ +RR + TYL FID KAYD VPQ AL+ KL+ G+ G L +++LY R+ VRVG + + + GVRQGCP SP+LF++FIN ++ G D +P GV + L+FADD V ++ S + + R +T W+ ++EM V KC +M + NK V QQ P+ ++I G VP VSEY L +RFT +L + +++ ++G++ + + L + +PV +K+ ++ + L +GAEV+GM+ + ++ ++N+ R+V G RN+ + I E+G + +AA +RARA+ K +TW+ L F+ + TWVTG W+ YA
Sbjct: 331 RGIALLPSLTKVVAKIAANRISQIAETHGLLAKEQAGFRTLEECTAQVATLYEVVKRRSIRNQSTYLAFIDYAKAYDKVPQGALLRKLESIGIGGHLLQVVKSLYEDPRMCVRVGSSTSPVVNYHCGVRQGCPASPILFDLFINDLLQGMDGVAIP-----GVSEAVSGLLFADDAVVMAESESALRRNLDLLTSWSEKHEMSVNASKCGIMKIRATEDVIAGGPNFLQPNKKARVEQQEPEPFEIMGNVVPEVSEYIYLGIRFTPDLCLNSMMQHVESKGRKAIGAMYYLLSKKDMPVYVKILSIKVKLQSILTYGAEVWGMSTLRCKGIQRIMNEACRLVVGGGRNAAM--DRIRSELGIQSVANIAAVKRARAVAKWPGCKTWIATLSTSQFRSREWTWVTGNIKWLKRYA 737
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 242 bits (617), Expect = 1.450e-66 Identity = 139/397 (35.01%), Postives = 223/397 (56.17%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTY 1334
RGISL+ T K+L+ I++ RL+ K + K QAGFR REECV Q+ L E+ RRRK+ GL T++ FID KAYD VP +AL+ K+ G+ G+ I LY ++ VRVG +++ + GVRQGCP SP+LF+IFIN ++DG VP G+ + IP L+FADD V L+ S ++ ++T W+++ EM++ +KC +M +N +L + I G+P+ V+EY L + F + + L G++ ++ FL R IP M++A+VR V++P L +G E++GM+ +++ + + R+V G+ R++ + I E+ I + R R K +TW+ L+ +P K++ TWV+G W +
Sbjct: 1162 RGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIKGVKVP-----GIDTEIPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQR--IRNELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRF 1545
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG) HSP 1 Score: 240 bits (612), Expect = 2.290e-66 Identity = 138/397 (34.76%), Postives = 218/397 (54.91%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTY 1334
RGISL+ T K+L+ I++ RL K + +K QAGFR REECV Q+ L E+ RRRK+ GL T++ FID KAYD VP EAL+ K+ G+ G+ I LY ++ VRVG +++ D GVRQGCP SP+LF+I+IN ++DG +P G++ IP L+FADD V L+ S ++ ++T W+ + EM++ KC +M +N +L + I G+P+ V EY L + F + L ++ ++ FL + +P M+ A++R V+IP L +G E++GM+ +++ + + R+V G+ R++ + EM I A+ R R K +TW+ L+ +PFK++ TWV+G W +
Sbjct: 476 RGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP-----GIEECIPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSRLR--SEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRF 859
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1R1X253_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X253_9FUNG) HSP 1 Score: 228 bits (582), Expect = 1.530e-63 Identity = 132/397 (33.25%), Postives = 216/397 (54.41%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTY 1334
+GISLM + +K++T I S RL K L K QAGFR REECV+Q+ L E RRRK+ LPT++ FID KA+D VP +AL+ KL + G I LY +IQ+R G ++E + GVRQGCP SP+LF++FIN +++ +P ++G ++ L+FADD V L+ S ++ +++ W+ + EM+V KC + + + +++ + + G VP V EY L + F + + + ++ ++ + FL + IP+ ++ ++R V++P +G E++GM++A ++ +L+ R+V G + + I I E+ P+ A R RA K K RTW+ L+E P K K TWV+G W+ +
Sbjct: 170 KGISLMPSIIKIVTKIASHRLAEMDLKHNLLIKEQAGFRTREECVSQATVLYEAVRRRKIKSLPTWIGFIDFAKAFDRVPHQALLYKLKKLNIGGHLHKVISALYKNPKIQIRFGNALSETVEYECGVRQGCPASPMLFDLFINDILEAIKGVYIP-ELEGNIRG----LLFADDAVVLAESPAELQIAFEKISQWSKKWEMKVNASKCGAIGIGQSTNMI------FTVQGGIVPQVEEYKYLGIMFNKRWNHVSAIKNNTDNARKALNGMYYFLARKKIPIALRTIIIRSVLLPIATYGGEIFGMSQARNNKIQSILDTATRLVLGAGKTAAITR--IREELRITPVNTKTAISRERAYYKWHKSRTWISDLIEFPMKSKLATWVSGTQRWIKRF 553
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 231 bits (590), Expect = 2.440e-63 Identity = 133/397 (33.50%), Postives = 221/397 (55.67%), Query Frame = 3
Query: 144 RGISLMATSLKLLTVILSTRLNGAFEKAGLFSKAQAGFRRREECVNQSACLLEITRRRKLMGLPTYLLFIDLKKAYDMVPQEALMAKLDFYGVRGRALGFIRTLYS*SRIQVRVG*TVTEPADLLRGVRQGCPLSPVLFNIFINGVMDGADRSGVPVRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTY 1334
RGISL+ T K+++ I+S RL K + +K QAGFR REECV Q+ L E+ RRRK+ GL T++ FID KAYD VP +AL+ K+ G+RG+ I LY ++ VRVG +++ + GVRQGCP SP+LF+IFIN ++ G +P G+ + I L+FADD V L+ S ++ +++ W+ + EM++ +KC +M +N +L + + G+ + V+EY L + F + L G++ ++ FL + IP M+VA++R V+IP L +G E++GM+ + +++ + + R+V G+ +++ + E+ I + R R K +TW+ L+++PFK++ TWV+G W +
Sbjct: 538 RGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIKGVKIP-----GIDTEIAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQRLR--NELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRF 921 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6504.14092.1 >prot_H-elongata_contig6504.14092.1 ID=prot_H-elongata_contig6504.14092.1|Name=mRNA_H-elongata_contig6504.14092.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp MDGADRSGVPVRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWback to top mRNA from alignment at H-elongata_contig6504:1857..3247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6504.14092.1 ID=mRNA_H-elongata_contig6504.14092.1|Name=mRNA_H-elongata_contig6504.14092.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1391bp|location=Sequence derived from alignment at H-elongata_contig6504:1857..3247+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6504:1857..3247+ >mRNA_H-elongata_contig6504.14092.1 ID=mRNA_H-elongata_contig6504.14092.1|Name=mRNA_H-elongata_contig6504.14092.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1620bp|location=Sequence derived from alignment at H-elongata_contig6504:1857..3247+ (Himanthalia elongata Himel1 dioecious)back to top |