prot_H-elongata_contig5100.12360.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI) HSP 1 Score: 175 bits (443), Expect = 6.080e-46 Identity = 132/313 (42.17%), Postives = 159/313 (50.80%), Query Frame = 0
Query: 8 QRCGSTLIICPHKIRSQWEREIRQRTKPRALKVVAYPGVRDILAVGGKASSKRQARMGRR--------------KRKNSSNANAFRVAGRAVEGTPLQQQPPGITQSGGEDWGGRDEQEENNSEGLSGLREDVSANAVVG--------------------------------AGSSSTPGPHDGEHVNEEEAGWRV-GKARDVDHESA--FALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
+RCGSTLIICPHKIRSQWEREIR RTK ALKV Y GVR+IL++G KA R + +A A V G +++ T + G D G R +++ + R+D+ V G A +S T G+ + V G D D S FALLSP+ LASYD+VLTTF+VLRAEVHHA+SKFA G+ G+ RVIPSPLPALKWWRVV+DEAHMVESTTQETAKMALKIP THR+
Sbjct: 583 KRCGSTLIICPHKIRSQWEREIRARTKAGALKVAVYNGVREILSMGEKAKRASXXXXXXXXXXXXXXXXXXXTDSRNSDHDATNTSAANNTVSG---KRRDTSTTPAAGADQGSRTNRDQPQD---TLPRDDLDQQPVPGDXXXXXXXXXXXXXXXXXXXXXXXXXXHPVAQAAASGT-----GQEATAASSATDVSGGGSDTDSSSGDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESKFA--GALGDGGSAVAVGRPSLRRKKRY-RVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPTTHRW 881
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE) HSP 1 Score: 163 bits (413), Expect = 6.180e-42 Identity = 127/332 (38.25%), Postives = 153/332 (46.08%), Query Frame = 0
Query: 10 CGSTLIICPHKIRSQWEREIRQRTKPRALKVVAYPGVRDILAVGGKASSKRQARMGRRKRKNSSNANAFRVAGRAVEGTPLQQQPPGITQSGGEDWGGRDEQEENNSEG-----LSGLREDVSA------------------NAVVGAGSSSTPGPHDGEH----------------------------------------VNEEEAGWRVGKA-------RDVDHESAFALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
CGSTLIICPHKIRSQW REIR RTK ALKV Y GVR+IL++G KA R ++R R++ G+ G G RD ++ N G ++G R + +A+ G P P D + G R G + FALLSP+ LASYD+VLTTF+VLRAEVHHA+S+FA G+ G+ RVIPSPLPALKWWRVV+DEAHMVESTTQETAKMALKIPATHR+
Sbjct: 385 CGSTLIICPHKIRSQWAREIRARTKAGALKVAVYNGVREILSLGEKAKLASSTRRNSKRR-------------RSINGSTTPATTAGT--------GSRDSDDDANDTGTANNTVNGKRREAXXXXXXXXXXXXXXXXXQPQDALFRDGPDQQPVPGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAASNATEGSRSGGSDAXXXXXXXXXXSDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFA--GALGDGGSAVAVGRPSLRRKKRY-RVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRW 692
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A836C7R9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R9_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.560e-21 Identity = 92/281 (32.74%), Postives = 126/281 (44.84%), Query Frame = 0
Query: 10 CGSTLIICPHKIRSQWEREIRQRTKPRALKVVAYPGVRDILAVGGKASSKRQARMGRRKRKNSSNANAFRVAGRAVEGTPLQQQPPGITQSGGEDWGGRDEQEENNSEGLSGLREDVSAN-------------AVVGAGSSSTPGPHDGEHVNEEEAGWRVGKARDVDHESA------FALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
CG+TLI+CP I QW +E+++ T P A+KVV YPG+ +++ G S RQ +P T G D + + E + + A AG+++ H G V + G + A +ALL P LAS D+VLTT+DVLRAEVHHA + XXXXXXXXX +V+PSPL AL WWRV +DEA MVE+T + A+MA +PA +R+
Sbjct: 779 CGATLIVCPATILHQWRQELKRHTAPGAVKVVEYPGISEVVRRG----SMRQR-------------------------SPRPPPAAAATHDGASDAADTETEAETRTADAXXXXXXLKATNDXXXXXXXXXXXXXXAAGAAADGSAHTGSDVKQPSTEAVEGSPKAAKRALAKPVAAPYALLDPATLASCDVVLTTYDVLRAEVHHAVAXXXXXXXXXXXXXXXXXXXRTMRRARAY-KVVPSPLTALLWWRVAMDEAQMVETTVSDAAQMATLLPAVNRW 1029
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A7S4PJ83_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PJ83_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 8.900e-15 Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0
Query: 174 PEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
P LASYDIVLT++DVLR E+H + +G +V PSPLP + WWR+ +DEA M+ES+T +AKMAL++PA +R+
Sbjct: 117 PPSLASYDIVLTSYDVLRTEIHFEGNPRPLRGKK-------------------KYQVFPSPLPQILWWRICLDEAQMIESSTANSAKMALRLPAVNRW 195
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: UPI0014026C16 (E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014026C16) HSP 1 Score: 81.3 bits (199), Expect = 1.320e-13 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 0
Query: 172 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQG--SAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
+ P KLA D+V+TT+DVLR+E+ + D + N+G SAG +PSPL A+ WWRV +DEA MVE TT + A+MAL++ + +R+
Sbjct: 876 VQPRKLAQQDVVITTYDVLRSELSYVDLPYCNRGVGSAGGVDSLLSSEGGRRFRQGKRYMALPSPLVAVHWWRVCLDEAQMVERTTAKAAEMALRLSSVNRW 977
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A8C4WVF7_EPTBU (SNF2 histone linker PHD RING helicase n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WVF7_EPTBU) HSP 1 Score: 79.3 bits (194), Expect = 5.420e-13 Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query: 172 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
++P LASYDIVLTT+ VLR+E+ +AD + SAG+ IPSPL A++WWR+ +DEA MVE TT + A+MAL++ A + +
Sbjct: 161 IAPAVLASYDIVLTTYHVLRSELDYADIPLGGRSSAGKGVTQESRLRLTKRYM-----AIPSPLVAVEWWRLCLDEAQMVECTTAKAAEMALRLSAVNHW 255
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A0B6Z6J5_9EUPU (SNF2-rel_dom domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Z6J5_9EUPU) HSP 1 Score: 72.4 bits (176), Expect = 2.870e-12 Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 0
Query: 167 SAFALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
S + P+ LA DIV+TT+DVLR EV + + N S PSP+ A++WWR+ +DEA MVE T +TA+MALK+ A +R+
Sbjct: 27 SKLGYIQPQTLAQQDIVITTYDVLRKEVDYVNLPHTNSESGRRFRHPKRFL------------ATPSPMVAVEWWRICLDEAQMVECVTTKTAEMALKLKAVNRW 119
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: UPI000C6E503C (E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E503C) HSP 1 Score: 77.0 bits (188), Expect = 3.530e-12 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query: 172 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
+ P LA YDIVLTT+ VLR E+++ D +N S IPSPL +++WWR+ +DEA MVESTT +TA+MA ++ + HR+
Sbjct: 660 IPPPVLADYDIVLTTYSVLRRELNYVDLPHSNDDSGRRFRNPKRFM------------TIPSPLLSIEWWRICLDEAQMVESTTTKTAEMAQRLTSVHRW 747
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: UPI0018D8F32C (E3 ubiquitin-protein ligase SHPRH-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8F32C) HSP 1 Score: 75.9 bits (185), Expect = 8.770e-12 Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query: 172 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
L P+ LA +DIV+TT+D LR E+++ D N + +PSPLPA++WWRV +DEA MVE T + A+MAL++ A +R+
Sbjct: 944 LQPQMLAEHDIVITTYDTLRTELNYVDLPHTNSDNGRRLRHAKRYM------------AVPSPLPAVEWWRVCLDEAQMVECPTAKVAEMALRLTAVNRW 1031
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: T1JC89_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JC89_STRMM) HSP 1 Score: 75.5 bits (184), Expect = 1.150e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0
Query: 169 FALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 271
F + P KLA YDIV+TT+++LR E+H+ D +N + + SPL A++WWR+ +DEA MVE+ + TA MAL++ A +R+
Sbjct: 547 FGFIQPPKLADYDIVITTYEILRRELHYVDLPHSNSETGRRFRKPKRFMP------------VSSPLTAVEWWRICLDEAQMVETVSTRTADMALRLHAVNRW 637 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig5100.12360.1 ID=prot_H-elongata_contig5100.12360.1|Name=mRNA_H-elongata_contig5100.12360.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bpback to top |