mRNA_H-elongata_contig5100.12360.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5100.12360.1
Unique NamemRNA_H-elongata_contig5100.12360.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 6.080e-46
Identity = 132/313 (42.17%), Postives = 159/313 (50.80%), Query Frame = 1
Query:   22 QRCGSTLIICPHKIRSQWEREIRQRTKPRALKVVAYPGVRDILAVGGKASSKRQARMGRR--------------KRKNSSNANAFRVAGRAVEGTPLQQQPPGITQSGGEDWGGRDEQEENNSEGLSGLREDVSANAVVG--------------------------------AGSSSTPGPHDGEHVNEEEAGWRV-GKARDVDHESA--FALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            +RCGSTLIICPHKIRSQWEREIR RTK  ALKV  Y GVR+IL++G KA                          R +  +A     A   V G   +++    T + G D G R  +++      +  R+D+    V G                                A +S T     G+      +   V G   D D  S   FALLSP+ LASYD+VLTTF+VLRAEVHHA+SKFA  G+ G+                   RVIPSPLPALKWWRVV+DEAHMVESTTQETAKMALKIP THR+
Sbjct:  583 KRCGSTLIICPHKIRSQWEREIRARTKAGALKVAVYNGVREILSMGEKAKRASXXXXXXXXXXXXXXXXXXXTDSRNSDHDATNTSAANNTVSG---KRRDTSTTPAAGADQGSRTNRDQPQD---TLPRDDLDQQPVPGDXXXXXXXXXXXXXXXXXXXXXXXXXXHPVAQAAASGT-----GQEATAASSATDVSGGGSDTDSSSGDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESKFA--GALGDGGSAVAVGRPSLRRKKRY-RVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPTTHRW 881          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 6.180e-42
Identity = 127/332 (38.25%), Postives = 153/332 (46.08%), Query Frame = 1
Query:   28 CGSTLIICPHKIRSQWEREIRQRTKPRALKVVAYPGVRDILAVGGKASSKRQARMGRRKRKNSSNANAFRVAGRAVEGTPLQQQPPGITQSGGEDWGGRDEQEENNSEG-----LSGLREDVSA------------------NAVVGAGSSSTPGPHDGEH----------------------------------------VNEEEAGWRVGKA-------RDVDHESAFALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            CGSTLIICPHKIRSQW REIR RTK  ALKV  Y GVR+IL++G KA      R   ++R             R++ G+       G         G RD  ++ N  G     ++G R +                     +A+   G    P P D                                            +    G R G +               FALLSP+ LASYD+VLTTF+VLRAEVHHA+S+FA  G+ G+                   RVIPSPLPALKWWRVV+DEAHMVESTTQETAKMALKIPATHR+
Sbjct:  385 CGSTLIICPHKIRSQWAREIRARTKAGALKVAVYNGVREILSLGEKAKLASSTRRNSKRR-------------RSINGSTTPATTAGT--------GSRDSDDDANDTGTANNTVNGKRREAXXXXXXXXXXXXXXXXXQPQDALFRDGPDQQPVPGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAASNATEGSRSGGSDAXXXXXXXXXXSDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFA--GALGDGGSAVAVGRPSLRRKKRY-RVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRW 692          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A836C7R9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R9_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.560e-21
Identity = 92/281 (32.74%), Postives = 126/281 (44.84%), Query Frame = 1
Query:   28 CGSTLIICPHKIRSQWEREIRQRTKPRALKVVAYPGVRDILAVGGKASSKRQARMGRRKRKNSSNANAFRVAGRAVEGTPLQQQPPGITQSGGEDWGGRDEQEENNSEGLSGLREDVSAN-------------AVVGAGSSSTPGPHDGEHVNEEEAGWRVGKARDVDHESA------FALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            CG+TLI+CP  I  QW +E+++ T P A+KVV YPG+ +++  G    S RQ                          +P        T  G  D    + + E  +         + A                  AG+++    H G  V +       G  +      A      +ALL P  LAS D+VLTT+DVLRAEVHHA +          XXXXXXXXX          +V+PSPL AL WWRV +DEA MVE+T  + A+MA  +PA +R+
Sbjct:  779 CGATLIVCPATILHQWRQELKRHTAPGAVKVVEYPGISEVVRRG----SMRQR-------------------------SPRPPPAAAATHDGASDAADTETEAETRTADAXXXXXXLKATNDXXXXXXXXXXXXXXAAGAAADGSAHTGSDVKQPSTEAVEGSPKAAKRALAKPVAAPYALLDPATLASCDVVLTTYDVLRAEVHHAVAXXXXXXXXXXXXXXXXXXXRTMRRARAY-KVVPSPLTALLWWRVAMDEAQMVETTVSDAAQMATLLPAVNRW 1029          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A7S4PJ83_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PJ83_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 8.900e-15
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1
Query:  520 PEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            P  LASYDIVLT++DVLR E+H   +    +G                       +V PSPLP + WWR+ +DEA M+ES+T  +AKMAL++PA +R+
Sbjct:  117 PPSLASYDIVLTSYDVLRTEIHFEGNPRPLRGKK-------------------KYQVFPSPLPQILWWRICLDEAQMIESSTANSAKMALRLPAVNRW 195          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: UPI0014026C16 (E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014026C16)

HSP 1 Score: 81.3 bits (199), Expect = 1.320e-13
Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 1
Query:  514 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQG--SAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            + P KLA  D+V+TT+DVLR+E+ + D  + N+G  SAG                      +PSPL A+ WWRV +DEA MVE TT + A+MAL++ + +R+
Sbjct:  876 VQPRKLAQQDVVITTYDVLRSELSYVDLPYCNRGVGSAGGVDSLLSSEGGRRFRQGKRYMALPSPLVAVHWWRVCLDEAQMVERTTAKAAEMALRLSSVNRW 977          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A8C4WVF7_EPTBU (SNF2 histone linker PHD RING helicase n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WVF7_EPTBU)

HSP 1 Score: 79.3 bits (194), Expect = 5.420e-13
Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query:  514 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            ++P  LASYDIVLTT+ VLR+E+ +AD     + SAG+                     IPSPL A++WWR+ +DEA MVE TT + A+MAL++ A + +
Sbjct:  161 IAPAVLASYDIVLTTYHVLRSELDYADIPLGGRSSAGKGVTQESRLRLTKRYM-----AIPSPLVAVEWWRLCLDEAQMVECTTAKAAEMALRLSAVNHW 255          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: A0A0B6Z6J5_9EUPU (SNF2-rel_dom domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Z6J5_9EUPU)

HSP 1 Score: 72.4 bits (176), Expect = 2.870e-12
Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  499 SAFALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            S    + P+ LA  DIV+TT+DVLR EV + +    N  S                         PSP+ A++WWR+ +DEA MVE  T +TA+MALK+ A +R+
Sbjct:   27 SKLGYIQPQTLAQQDIVITTYDVLRKEVDYVNLPHTNSESGRRFRHPKRFL------------ATPSPMVAVEWWRICLDEAQMVECVTTKTAEMALKLKAVNRW 119          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: UPI000C6E503C (E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E503C)

HSP 1 Score: 77.0 bits (188), Expect = 3.530e-12
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query:  514 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            + P  LA YDIVLTT+ VLR E+++ D   +N  S                        IPSPL +++WWR+ +DEA MVESTT +TA+MA ++ + HR+
Sbjct:  660 IPPPVLADYDIVLTTYSVLRRELNYVDLPHSNDDSGRRFRNPKRFM------------TIPSPLLSIEWWRICLDEAQMVESTTTKTAEMAQRLTSVHRW 747          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: UPI0018D8F32C (E3 ubiquitin-protein ligase SHPRH-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8F32C)

HSP 1 Score: 75.9 bits (185), Expect = 8.770e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:  514 LSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            L P+ LA +DIV+TT+D LR E+++ D    N  +                        +PSPLPA++WWRV +DEA MVE  T + A+MAL++ A +R+
Sbjct:  944 LQPQMLAEHDIVITTYDTLRTELNYVDLPHTNSDNGRRLRHAKRYM------------AVPSPLPAVEWWRVCLDEAQMVECPTAKVAEMALRLTAVNRW 1031          
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Match: T1JC89_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JC89_STRMM)

HSP 1 Score: 75.5 bits (184), Expect = 1.150e-11
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  505 FALLSPEKLASYDIVLTTFDVLRAEVHHADSKFANQGSAGEXXXXXXXXXXXXXXXXXXXRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMALKIPATHRY 813
            F  + P KLA YDIV+TT+++LR E+H+ D   +N  +                        + SPL A++WWR+ +DEA MVE+ +  TA MAL++ A +R+
Sbjct:  547 FGFIQPPKLADYDIVITTYEILRRELHYVDLPHSNSETGRRFRKPKRFMP------------VSSPLTAVEWWRICLDEAQMVETVSTRTADMALRLHAVNRW 637          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5100.12360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHS8_ECTSI6.080e-4642.17SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JYY0_9PHAE6.180e-4238.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7R9_9STRA4.560e-2132.74SNF2 family N-terminal domain-containing protein n... [more]
A0A7S4PJ83_9EUKA8.900e-1541.84Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
UPI0014026C161.320e-1340.20E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Pet... [more]
A0A8C4WVF7_EPTBU5.420e-1342.00SNF2 histone linker PHD RING helicase n=1 Tax=Epta... [more]
A0A0B6Z6J5_9EUPU2.870e-1237.14SNF2-rel_dom domain-containing protein (Fragment) ... [more]
UPI000C6E503C3.530e-1240.00E3 ubiquitin-protein ligase SHPRH-like n=1 Tax=Cen... [more]
UPI0018D8F32C8.770e-1238.00E3 ubiquitin-protein ligase SHPRH-like isoform X1 ... [more]
T1JC89_STRMM1.150e-1135.92Uncharacterized protein n=1 Tax=Strigamia maritima... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5100contigH-elongata_contig5100:1178..3531 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.8
Seed ortholog evalue4.3e-43
Seed eggNOG ortholog2880.D7FHS8
KEGG koko:K15710
EggNOG free text desc.ATP binding
EggNOG OGsCOG0553@1,KOG0298@2759
EC2.3.2.27
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Exons4
Model size813
Cds size813
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5100.12360.1prot_H-elongata_contig5100.12360.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5100 1178..3531 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930836.324158-CDS-H-elongata_contig5100:1177..13101622930836.324158-CDS-H-elongata_contig5100:1177..1310Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 1178..1310 -
1691679591.222676-CDS-H-elongata_contig5100:1177..13101691679591.222676-CDS-H-elongata_contig5100:1177..1310Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 1178..1310 -
1622930836.3411725-CDS-H-elongata_contig5100:2076..23681622930836.3411725-CDS-H-elongata_contig5100:2076..2368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 2077..2368 -
1691679591.2328908-CDS-H-elongata_contig5100:2076..23681691679591.2328908-CDS-H-elongata_contig5100:2076..2368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 2077..2368 -
1622930836.359748-CDS-H-elongata_contig5100:2612..28831622930836.359748-CDS-H-elongata_contig5100:2612..2883Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 2613..2883 -
1691679591.2455277-CDS-H-elongata_contig5100:2612..28831691679591.2455277-CDS-H-elongata_contig5100:2612..2883Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 2613..2883 -
1622930836.3770363-CDS-H-elongata_contig5100:3414..35311622930836.3770363-CDS-H-elongata_contig5100:3414..3531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 3415..3531 -
1691679591.2668204-CDS-H-elongata_contig5100:3414..35311691679591.2668204-CDS-H-elongata_contig5100:3414..3531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5100 3415..3531 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5100.12360.1

>prot_H-elongata_contig5100.12360.1 ID=prot_H-elongata_contig5100.12360.1|Name=mRNA_H-elongata_contig5100.12360.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bp
MVYVCGRQRCGSTLIICPHKIRSQWEREIRQRTKPRALKVVAYPGVRDIL
AVGGKASSKRQARMGRRKRKNSSNANAFRVAGRAVEGTPLQQQPPGITQS
GGEDWGGRDEQEENNSEGLSGLREDVSANAVVGAGSSSTPGPHDGEHVNE
EEAGWRVGKARDVDHESAFALLSPEKLASYDIVLTTFDVLRAEVHHADSK
FANQGSAGEGDGDGSRASVPRLRKRKRYRVIPSPLPALKWWRVVIDEAHM
VESTTQETAKMALKIPATHRY
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mRNA from alignment at H-elongata_contig5100:1178..3531-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5100.12360.1 ID=mRNA_H-elongata_contig5100.12360.1|Name=mRNA_H-elongata_contig5100.12360.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2354bp|location=Sequence derived from alignment at H-elongata_contig5100:1178..3531- (Himanthalia elongata Himel1 dioecious)
ATGGTTTACGTGTGCGGTCGTCAGCGGTGCGGCTCCACCTTGATCATCTG CCCACACAAGATACGATCTCAGTGGGAGCGCGAAATTCGACAAAGGACAA AGCCGAGAGCGCTCAAGGTAGGGGAGCGGAGGGGTTATGCGGGGCCGGAG AAGGGGCGCTCGCCTGCTCTCGCGTGCAGCTTTGTTGCTGTTTGAACGTC GTGTGCTAATGCCGCAGCAAGAGGTTTGGCGGGGAGTGGGGGGCGGGGAG GCGTGTACAATAACGTGCAGCTTTGCGATTATTTGGACGTCGCGTATTGC CGTTGACCCGATACGTGTACGTAAGACGTTACTTGTATATGATAAACTAC TCAGCGTGAGTGCGAGCATAGCTTGAGGCAGGTTTCTGTTCCCATATCGT CGTGTGTTTGGAGTTTTTACTTCAACATAAGACATTCGTAATATATTTTC TGGTTCACAACCCCACTAATTTTAAGCGGAATGTAGGAATGTATTTATTG TACAGGATACAAAGGAATACGCCATTTTGAGTGGAGTAGAAGTCGCGCCG CGACACGCTGTTCTCGTGGTATTTTCGGTCTGTGGTGGTACAGGCGGCGT GGTATGTCCGACTATTCCGTGCGCTCGCGCACGCACTGATGACCACAGGT TGTCGCTTATCCGGGCGTGCGGGATATCCTAGCGGTTGGTGGGAAGGCTT CATCTAAACGACAAGCCAGAATGGGTCGGCGCAAGAGGAAAAACAGCAGT AATGCAAATGCTTTTCGGGTTGCTGGTCGTGCTGTAGAGGGGACGCCACT GCAACAGCAGCCCCCAGGCATCACACAGTCCGGTGGTGAAGACTGGGGAG GGAGAGACGAACAAGAAGAAAATAATTCCGAGGGACTGTCGGGTTTGCGG GAAGATGTCTCCGCGAACGGTAGGCTTTATCCTTTTTTTTAACTACGTAT GTATTTGGTCCCTTCCCCCCTTAAATTATCACACAATTGTGTACCGAGGT AAACTCGCTCAGGAGAAAACTTCCTATCAGACGTTTTACCTGTGTACGAG CAGTTACGTTATTTTAGCGTTACACAAGTACGCAATCAAAACGGAACCGC TGTTGTAGTGTGCGAAAGGCAACGCCGTCGTGTGAGACTCTATGGAGCAC TAAGCAGCGGCAGCCGTGGTTGGTGCAGGATCTTCGTCAACTCCGGGACC CCACGACGGCGAGCATGTAAACGAGGAGGAGGCAGGGTGGAGGGTCGGCA AAGCGAGGGACGTCGACCACGAGAGTGCGTTCGCCTTGCTCTCTCCGGAA AAGCTGGCGTCCTACGACATCGTCCTCACCACGTTCGACGTGCTTCGGGC GGAGGTTCACCACGCAGACAGCAAGTTCGCGAATCAGGGCAGTGCCGGCG AAGGAGACGGCGACGGCTCCCGTGCGTCTGTACCCAGGCTCCGCAAGCGT AAAAGGTTTTATGTACTGTCTCTTTTTGAATGTCGTTTTGTCTCTGTATT TTTGAATGTGTGTTTGTGTGCGTTCATATGTGTCCCCTTGGGTGGTGTTC GGCCCCATTCGGTGCCTTCGACGAGTGGATCTCCCTACGAAGGTGGCGTG TTTCAATAAGCATGAACTCCTTCGTGGTGTTTTTTGCATTTGTTTTTTTG GCGAGAGGAGTATCTCGTGTAAGCTGAGCTTGCCTCGGTGGTACATAAGC CACGTTTTTAGCTCGGCCATCGGACACGACGTTTCATGTTCTTCGGTGGC GTGCAGTGTCTGACGGGTTGCAAAAGTGGCGAGTTATTTTGCCCAGCCAT ATGAGAGTGATCATGCCGCTTACCTATCGCCTTACGTACTGAAAGTACTA GACGCAGGGACGACCAGAGGATCGCCCGCAAAAATAACTACGTGTTCACT GAACAGTTTAAAAGAAAAGGACGCCGTGTTGTGCATCTTCCAACCGTGTT CACCACCAACCCGTCGACGCCTCTGTATAGTTTAAGAACTACTCTGCGTG GTTACTTTGCCTTTCTGTCTCTGTTTGTCTCTGCCTGTCTATCTTATCTC TCTCGTGTCAGTATGTCTATATTTCTCTGTTTTTTTTTCCTTCGTATCTC TCTGTCTCTTTATTATTTTTTATTTTTTTTCTGCCTCACTTTGTCTCTCT TGATCTGTTTCTCCACGCTTTTGATCCTTTTTTTGCCCGTGGTCTGTGCT GTTGATGATGAAATCTGGCAGGTATCGCGTCATACCATCCCCTCTCCCGG CACTGAAATGGTGGAGGGTGGTCATCGACGAGGCTCACATGGTAGAGAGC ACCACCCAAGAAACGGCGAAGATGGCTCTAAAGATCCCCGCCACGCACAG GTAT
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Coding sequence (CDS) from alignment at H-elongata_contig5100:1178..3531-

>mRNA_H-elongata_contig5100.12360.1 ID=mRNA_H-elongata_contig5100.12360.1|Name=mRNA_H-elongata_contig5100.12360.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1626bp|location=Sequence derived from alignment at H-elongata_contig5100:1178..3531- (Himanthalia elongata Himel1 dioecious)
ATGGTTTACGTGTGCGGTCGTCAGCGGTGCGGCTCCACCTTGATCATCTG
CCCACACAAGATACGATCTCAGTGGGAGCGCGAAATTCGACAAAGGACAA
AGCCGAGAGCGCTCAAGATGGTTTACGTGTGCGGTCGTCAGCGGTGCGGC
TCCACCTTGATCATCTGCCCACACAAGATACGATCTCAGTGGGAGCGCGA
AATTCGACAAAGGACAAAGCCGAGAGCGCTCAAGGTTGTCGCTTATCCGG
GCGTGCGGGATATCCTAGCGGTTGGTGGGAAGGCTTCATCTAAACGACAA
GCCAGAATGGGTCGGCGCAAGAGGAAAAACAGCAGTAATGCAAATGCTTT
TCGGGTTGCTGGTCGTGCTGTAGAGGGGACGCCACTGCAACAGCAGCCCC
CAGGCATCACACAGTCCGGTGGTGAAGACTGGGGAGGGAGAGACGAACAA
GAAGAAAATAATTCCGAGGGACTGTCGGGTTTGCGGGAAGATGTCTCCGC
GAACGGTTGTCGCTTATCCGGGCGTGCGGGATATCCTAGCGGTTGGTGGG
AAGGCTTCATCTAAACGACAAGCCAGAATGGGTCGGCGCAAGAGGAAAAA
CAGCAGTAATGCAAATGCTTTTCGGGTTGCTGGTCGTGCTGTAGAGGGGA
CGCCACTGCAACAGCAGCCCCCAGGCATCACACAGTCCGGTGGTGAAGAC
TGGGGAGGGAGAGACGAACAAGAAGAAAATAATTCCGAGGGACTGTCGGG
TTTGCGGGAAGATGTCTCCGCGAACGCCGTGGTTGGTGCAGGATCTTCGT
CAACTCCGGGACCCCACGACGGCGAGCATGTAAACGAGGAGGAGGCAGGG
TGGAGGGTCGGCAAAGCGAGGGACGTCGACCACGAGAGTGCGTTCGCCTT
GCTCTCTCCGGAAAAGCTGGCGTCCTACGACATCGTCCTCACCACGTTCG
ACGTGCTTCGGGCGGAGGTTCACCACGCAGACAGCAAGTTCGCGAATCAG
GGCAGTGCCGGCGAAGGAGACGGCGACGGCTCCCGTGCGTCTGTACCCAG
GCTCCGCAAGCGTAAAAGCCGTGGTTGGTGCAGGATCTTCGTCAACTCCG
GGACCCCACGACGGCGAGCATGTAAACGAGGAGGAGGCAGGGTGGAGGGT
CGGCAAAGCGAGGGACGTCGACCACGAGAGTGCGTTCGCCTTGCTCTCTC
CGGAAAAGCTGGCGTCCTACGACATCGTCCTCACCACGTTCGACGTGCTT
CGGGCGGAGGTTCACCACGCAGACAGCAAGTTCGCGAATCAGGGCAGTGC
CGGCGAAGGAGACGGCGACGGCTCCCGTGCGTCTGTACCCAGGCTCCGCA
AGCGTAAAAGGTATCGCGTCATACCATCCCCTCTCCCGGCACTGAAATGG
TGGAGGGTGGTCATCGACGAGGCTCACATGGTAGAGAGCACCACCCAAGA
AACGGCGAAGATGGCTCTAAAGATCCCCGCCACGCACAGGTATGTATCGC
GTCATACCATCCCCTCTCCCGGCACTGAAATGGTGGAGGGTGGTCATCGA
CGAGGCTCACATGGTAGAGAGCACCACCCAAGAAACGGCGAAGATGGCTC
TAAAGATCCCCGCCACGCACAGGTAT
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