prot_H-elongata_contig47373.11852.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5J7P7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P7_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.550e-14 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEMKDPCS---PIKVLGE 120
K ++ Q DV AY+ A +K E+Y+ PE ++ +++ A+YGL +G W + L G+EQ V+PCV + ++ +IVIYVDD+LVA A GER+E+ + P+K LGE
Sbjct: 248 KGKKLAQWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWWFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGEREELFASLNKKFPVKDLGE 371
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5K3C5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C5_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.970e-14 Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEMKDPCS---PIKVLGEV 121
K ++ DV AY+ A +K E+Y+ PE ++ +++ A+YGL +G W + L G+EQ V+PCV + ++ +IVIYVDD+LVA A GER+E+ + P+K+ G V
Sbjct: 562 KGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGEREELFASLNKKFPVKIWGSV 686
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 4.170e-14 Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEMKDPCS---PIKVLGE 120
K ++ DV AY+ A +K E+Y+ PE ++ +++ A+YGL G W + L G+EQ V+PCV + ++ +IVIYVDD+LVA A GER+E+ + P+K LGE
Sbjct: 604 KGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGEREELFASLNKKFPVKDLGE 727
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5KAM7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM7_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 5.500e-14 Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEM---KDPCSPIKVLGE 120
K ++ DV AY+ A +K ELY+ P ++ +++A+YGL +G W + L G+EQY V+PCV + ++ +IVIYVDD+LVA A G R+E+ + SP+K LGE
Sbjct: 330 KGKKLAHWDVKQAYIHAKLKDELYLRFPGGCGSMSGKVVNVESALYGLKQSGREWGFEAADALIEDGYEQYRVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGGREELFASLNKKSPVKDLGE 453
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5JRB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB0_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 7.410e-14 Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEM---KDPCSPIKVLGE 120
K ++ DV AY+ A +K E+Y+ PE ++ ++++A+YGL +G W + L G+EQ V+PCV + ++ +IVIYVDD+LVA A GER+E+ + P+K LGE
Sbjct: 212 KGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVEHALYGLKQSGREWGFEAADALIENGYEQCGVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGEREELFASPNKKFPMKDLGE 335
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5JC05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC05_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 7.430e-14 Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQE 107
K ++ DV AY+ A +K E+Y+ PE ++ +++ A+YGL +G W + L G+EQ V+PCV + ++ +IVIYVDD+LVA A GER+E
Sbjct: 37 KGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGEREE 144
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 7.740e-14 Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEMKDPCS---PIKVLGE 120
K ++ DV AY+ A +K E+Y+ PE ++ +++ A+YGL +G W + L G+EQ V+PCV + ++ +IV+YVDD+LVA A GER+E+ + P+K LGE
Sbjct: 463 KGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVMYVDDILVA--ADEGEREELFASLNKKFPVKDLGE 586
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 8.580e-14 Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEMKDPCS---PIKVLGE 120
K ++ DV AY+ A ++ E+Y+ PE ++ +++ A+YGL +G W + L G+EQ V+PCV + ++ +IVIYVDD+LVA A G+R+E+ + P+K LGE
Sbjct: 37 KGKKLAHWDVKQAYIHAKLREEIYLSFPEGCSSMSGKVVKIERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGDREELFASLNKKFPVKDLGE 160
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5JXE8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE8_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 1.320e-13 Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEMKDPCS---PIKVLGE 120
K ++ DV AY+ A ++ E+Y+ PE R ++ +++ A+YG +G W + L G+EQ V+PCV + ++ +IVIYVDD+LVA A GER+E+ + P+K LGE
Sbjct: 120 KGKKLAHWDVKQAYIHAKLEEEIYLRFPEGCRGMSGKVVKVERALYGPKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA--ADEGEREELFASLNKKVPVKDLGE 243
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 1.400e-13 Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 0
Query: 2 KDWEILQLDVGMAYLEADVKYELYIELPEDYRDFCDQMGRLQNAIYGLVHAGLLWSKRFSAKLAARGFEQYLVNPCVTAR----KIRRIIVIYVDDLLVANEAKRGERQEMKDPCS---PIKVLGE 120
K ++ DV AY+ A +K E+Y+ PE ++ +++ A+YGL +G W + L G+EQ V+PCV + ++ +IVIYVDD++VA A GER+E+ + P+K +GE
Sbjct: 317 KGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIVA--ADEGEREELFASLNKKFPVKDVGE 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47373.11852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig47373.11852.1 ID=prot_H-elongata_contig47373.11852.1|Name=mRNA_H-elongata_contig47373.11852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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