prot_H-elongata_contig19232.5322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig19232.5322.1
Unique Name	prot_H-elongata_contig19232.5322.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	84

Homology

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BLAST of mRNA_H-elongata_contig19232.5322.1 vs. uniprot
Match: D7G5P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P3_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.000e-18
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0

Query:    3 SPADIILSHQEFGLRRWKEYAALKHGNNRRFSGSHHGREILLEIASTIRAQEVRKLQRELKKISTLTKELLNALRSEQADNA 84
            S A   LS Q +GL RWKEYA L+HG N+RF  S HGREIL+E ASTIR +EV  L RELK++  L +EL +AL +EQ + +
Sbjct:  265 SNAGASLSPQTYGLHRWKEYAVLRHGGNKRFVNSQHGREILVETASTIRTKEVADLNRELKEMRALVQELHSALHAEQVEKS 346

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BLAST of mRNA_H-elongata_contig19232.5322.1 vs. uniprot
Match: A0A6H5KE49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE49_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.900e-9
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 0

Query:    3 SPADIILSHQEFGLRRWKEYAALK--------HGNNRRFSGSHHGREILLEIASTIRAQEVR 56
            S A   +S Q +GL RWKEYA L+        HG N+RF  S HGREIL E ASTIR +EVR
Sbjct:  200 SNAGASVSPQTYGLHRWKEYAVLRQGTPWLVRHGGNKRFVNSQHGREILFETASTIRTKEVR 261

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig19232.5322.1 vs. uniprot

BLAST of mRNA_H-elongata_contig19232.5322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G5P3_ECTSI	3.000e-18	56.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KE49_9PHAE	1.900e-9	54.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig19232	contig	H-elongata_contig19232:1465..2242 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig19232.5322.1	mRNA_H-elongata_contig19232.5322.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig19232 1465..2242 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig19232.5322.1 ID=prot_H-elongata_contig19232.5322.1|Name=mRNA_H-elongata_contig19232.5322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
GESPADIILSHQEFGLRRWKEYAALKHGNNRRFSGSHHGREILLEIASTI
RAQEVRKLQRELKKISTLTKELLNALRSEQADNA