prot_H-elongata_contig19232.5322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19232.5322.1
Unique Nameprot_H-elongata_contig19232.5322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
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BLAST of mRNA_H-elongata_contig19232.5322.1 vs. uniprot
Match: D7G5P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P3_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.000e-18
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0 
Query:    3 SPADIILSHQEFGLRRWKEYAALKHGNNRRFSGSHHGREILLEIASTIRAQEVRKLQRELKKISTLTKELLNALRSEQADNA 84
            S A   LS Q +GL RWKEYA L+HG N+RF  S HGREIL+E ASTIR +EV  L RELK++  L +EL +AL +EQ + +
Sbjct:  265 SNAGASLSPQTYGLHRWKEYAVLRHGGNKRFVNSQHGREILVETASTIRTKEVADLNRELKEMRALVQELHSALHAEQVEKS 346
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BLAST of mRNA_H-elongata_contig19232.5322.1 vs. uniprot
Match: A0A6H5KE49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE49_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.900e-9
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    3 SPADIILSHQEFGLRRWKEYAALK--------HGNNRRFSGSHHGREILLEIASTIRAQEVR 56
            S A   +S Q +GL RWKEYA L+        HG N+RF  S HGREIL E ASTIR +EVR
Sbjct:  200 SNAGASVSPQTYGLHRWKEYAVLRQGTPWLVRHGGNKRFVNSQHGREILFETASTIRTKEVR 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19232.5322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5P3_ECTSI3.000e-1856.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE49_9PHAE1.900e-954.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19232contigH-elongata_contig19232:1465..2242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19232.5322.1mRNA_H-elongata_contig19232.5322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19232 1465..2242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19232.5322.1 ID=prot_H-elongata_contig19232.5322.1|Name=mRNA_H-elongata_contig19232.5322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
GESPADIILSHQEFGLRRWKEYAALKHGNNRRFSGSHHGREILLEIASTI
RAQEVRKLQRELKKISTLTKELLNALRSEQADNA
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