prot_H-elongata_contig139989.2786.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: A0A6H5L429_9PHAE (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L429_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 3.760e-17 Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
MPIILLHDAEGGI+TVELKNGEV RG+LDEAEDSMNLVLK
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLK 40
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: D7FT20_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT20_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 1.460e-16 Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
MPIILLHDAEGGI+TVELKNGEV RG+LDEAEDSMNLVLK
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLK 40
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: W7TBA5_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBA5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 6.230e-15 Identity = 31/40 (77.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
+PIILLHDAEGGI+TVE + GE+YRGLLDEAED+MNL+L+
Sbjct: 11 IPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILR 50
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: I2CSB6_NANGC (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSB6_NANGC) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-14 Identity = 31/40 (77.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
+PIILLHDAEGGI+TVE + GE+YRGLLDEAED+MNL+L+
Sbjct: 11 IPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILR 50
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: A0A4D9CW68_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW68_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.760e-14 Identity = 31/40 (77.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
+PIILLHDAEGGI+TVE + GE+YRGLLDEAED+MNL+L+
Sbjct: 11 IPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILR 50
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: A0A835YVP5_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP5_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.000e-14 Identity = 29/40 (72.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
MP+ILLHDAEG + TVE+K+GEVYRG+LDEAED+MN+++K
Sbjct: 11 MPVILLHDAEGAVCTVEVKSGEVYRGILDEAEDNMNILMK 50
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: A0A6U1QDM6_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QDM6_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.750e-14 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVL 39
+PII+LHDAEG IVTVELKNGE YRGLLDEAED+MN +L
Sbjct: 11 IPIIMLHDAEGCIVTVELKNGETYRGLLDEAEDNMNCIL 49
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: A0A067C915_SAPPC (Small nuclear ribonucleoprotein Sm D3 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C915_SAPPC) HSP 1 Score: 65.5 bits (158), Expect = 1.850e-12 Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
+P ILLHD EG IVTVELKNG++YRG LDE ED+MN VLK
Sbjct: 11 IPTILLHDGEGTIVTVELKNGDLYRGFLDETEDNMNCVLK 50
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: F0YRV7_AURAN (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRV7_AURAN) HSP 1 Score: 63.2 bits (152), Expect = 4.930e-12 Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
+P+IL+HD EG IVT+E KNG+ YRG LDE ED+MN VLK
Sbjct: 11 VPLILMHDGEGTIVTIECKNGDTYRGFLDETEDNMNCVLK 50
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Match: F0YMQ0_AURAN (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMQ0_AURAN) HSP 1 Score: 63.2 bits (152), Expect = 1.040e-11 Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVYRGLLDEAEDSMNLVLK 40
+P+IL+HD EG IVT+E KNG+ YRG LDE ED+MN VLK
Sbjct: 5 VPLILMHDGEGTIVTIECKNGDTYRGFLDETEDNMNCVLK 44 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139989.2786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig139989.2786.1 ID=prot_H-elongata_contig139989.2786.1|Name=mRNA_H-elongata_contig139989.2786.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bpback to top |