prot_H-elongata_contig137427.2637.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137427.2637.1 vs. uniprot
Match: A0A6H5L4T7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T7_9PHAE) HSP 1 Score: 143 bits (360), Expect = 6.350e-39 Identity = 79/133 (59.40%), Postives = 96/133 (72.18%), Query Frame = 0
Query: 1 GDATSPLLSANSNMTTLIEGGNNKKQTGRLQKAQGMAVKESASEVALRACFI-RVREIAHILGLPSSIQEDACLLLRKVEDKGLFKVKKDPRGKAMCAAVTYITCRTWNVSRSMKDVSKAVDVTLRDVNKACK 132
G A SPLLSA S M TLIEGG + K T +LQK QGMAVKESASE AL+ F +VRE + LGL ++QE ACLLLRK ED GLFKVKK RG A+C AVT +TCR W ++MK++S +V+L+ +NKA K
Sbjct: 67 GAAASPLLSAKSGMNTLIEGGQDSKLTAKLQKLQGMAVKESASERALKMDFFGKVREFGNRLGLTHAMQEHACLLLRKAEDSGLFKVKKAERGVAICVAVTLLTCRQWRRGQTMKEMSTMFNVSLKALNKAVK 199
BLAST of mRNA_H-elongata_contig137427.2637.1 vs. uniprot
Match: A0A662SI12_9ARCH (Transcription initiation factor IIB n=1 Tax=Candidatus Korarchaeota archaeon TaxID=2056630 RepID=A0A662SI12_9ARCH) HSP 1 Score: 64.7 bits (156), Expect = 7.740e-10 Identity = 38/116 (32.76%), Postives = 65/116 (56.03%), Query Frame = 0
Query: 15 TTLIEGGNNKKQTGRLQKAQGMAVKESASEVALRACFIRVREIAHILGLPSSIQEDACLLLRKVEDKGLFKVKKDPRGKAMCAAVTYITCRTWNVSRSMKDVSKAVDVTLRDVNKA 130
T++I GG +KK T +L++AQ + E ALR ++R A L LP ++ +DA +L RK KGL K + +M AAV Y CR + R++++V++ + ++V ++
Sbjct: 37 TSIISGGESKKITEKLKRAQRRVTSGVSREKALRIALKKLRRAAVKLNLPPAVYQDAAILYRKASAKGLVKGRSMD---SMLAAVVYAACRRTHTPRNLREVAEHFKMKEKEVGRS 149
BLAST of mRNA_H-elongata_contig137427.2637.1 vs. uniprot
Match: A0A7J2IYA4_9ARCH (Transcription initiation factor IIB n=2 Tax=Candidatus Pacearchaeota TaxID=1801617 RepID=A0A7J2IYA4_9ARCH) HSP 1 Score: 51.2 bits (121), Expect = 6.770e-5 Identity = 28/86 (32.56%), Postives = 48/86 (55.81%), Query Frame = 0
Query: 47 LRACFIRVREIAHILGLPSSIQEDACLLLRKVEDKGLFKVKKDPRGKAM---CAAVTYITCRTWNVSRSMKDVSKAVDVTLRDVNK 129
LR +R +A +L LP+ ++E+A L V +GL RG++M AA Y CR++N+ R++ ++S A DV +D+ +
Sbjct: 113 LRLAMAELRRVASVLDLPNFVKEEASRLYNLVLQRGLV------RGRSMEANVAACIYAACRSYNLPRTLDEISAASDVDRKDIGR 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137427.2637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig137427.2637.1 ID=prot_H-elongata_contig137427.2637.1|Name=mRNA_H-elongata_contig137427.2637.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bpback to top |