mRNA_H-elongata_contig51511.12414.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51511.12414.1
Unique NamemRNA_H-elongata_contig51511.12414.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: D7FJE9_ECTSI (PTIF2, plastid translation intiation factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE9_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 2.540e-92
Identity = 146/179 (81.56%), Postives = 165/179 (92.18%), Query Frame = 1
Query:    1 SEMISEDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYALE 537
            SEMISEDEYF+A+CK+LPSGVG ITKSDVAIA VSNAFVVGFNVGADQEA+REARA GIDIGYYSVVYNVMDDI+ +LDELVSPTPDG YTGRA+VK+IFNIGKVGNIAGS+VEDGV+NKG +VL+KR GRI+HEG LKTLKN+K D  +MV GTECGIQVEGFEDFQE D++ECY ++
Sbjct:  839 SEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAVVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 1017          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A835ZAQ9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ9_9STRA)

HSP 1 Score: 236 bits (601), Expect = 8.560e-72
Identity = 115/178 (64.61%), Postives = 144/178 (80.90%), Query Frame = 1
Query:    4 EMISEDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYALE 537
            E++SEDEYF+  CK+L +GVG +TKSD+AIA VSNA+VV FNV A+ +A  +AR   I+IGYY+VVY+V+D +++RLD + SPTPDGVY GRA VK+IF+IGKVGNIAGS V DG V +G++V + R GR++HEG LK LKNVKADV+ MVAGTECGIQV  FEDFQE D +ECY  E
Sbjct:  403 ELVSEDEYFKVTCKVLTAGVGEVTKSDIAIAGVSNAYVVCFNVAANHQAVEDARRGDIEIGYYNVVYDVLDQVQERLDRIRSPTPDGVYIGRAQVKVIFSIGKVGNIAGSEVLDGEVRRGSNVRIMRMGRVVHEGALKVLKNVKADVEAMVAGTECGIQVSDFEDFQEGDFIECYIDE 580          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A7S3Y8J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J2_HETAK)

HSP 1 Score: 197 bits (501), Expect = 3.820e-56
Identity = 98/177 (55.37%), Postives = 131/177 (74.01%), Query Frame = 1
Query:    4 EMISEDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYAL 534
            ++ + DE      K+L +  G +TKSDVA+A+VS+A VV FNV A+ +A  EAR  GIDI Y S+VY+V+DD++ R+ E++SPTPDG Y G+A VK +F+IGKVG IAGS V DG V  GA+V + R  R+IHEG + TLKN+KAD  +MVAGTECGI +E FEDF+E D++ECY +
Sbjct:  546 QLKARDEIGEVTVKVLAAAAGEVTKSDVALASVSDALVVAFNVAANFQAQEEARERGIDITYASIVYDVLDDLEARIQEVLSPTPDGEYAGKARVKQVFDIGKVGRIAGSEVLDGRVINGANVRVLRGPRVIHEGVMGTLKNLKADADEMVAGTECGIGLEAFEDFEEGDVIECYVV 722          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A7S2Y1F3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F3_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.370e-53
Identity = 90/172 (52.33%), Postives = 131/172 (76.16%), Query Frame = 1
Query:   19 DEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYAL 534
            D++     K+L +  G I + D+A+A+VSNA V+GFNV A+ +A  +AR   I++ Y +VVY ++D++++R+ E++SPTP+G Y G+A +  +FNIGKVGNIAGS V DG V KG++V + R GR+IHE T+KTLKNVK DV++MVAGTECGIQ++GFE+F+  DI+E Y +
Sbjct:  547 DDFGEVTVKVLSATPGEINQGDIALASVSNALVIGFNVAANYQAQEDARKNEIEVMYATVVYEILDEMEERMQEVLSPTPEGEYIGKAEILQVFNIGKVGNIAGSNVLDGRVKKGSNVRVMRAGRVIHETTMKTLKNVKVDVEEMVAGTECGIQLQGFEEFEVGDIIESYIV 718          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A7S2SSV4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSV4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 7.740e-53
Identity = 86/177 (48.59%), Postives = 131/177 (74.01%), Query Frame = 1
Query:    4 EMISEDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYAL 534
            E+++EDE  + + K+L S VG +TKSDVAIA VS A+++ FNV A+ +A  +AR  G++IGYYS+VY+++++++ R+ E++SPTPDG   G+A VKM+F+IGKVG IAG  V DG + K  +V + R  RI++EG L TLK+VK DV ++ AG++CG+  E +E  +E D++ECY +
Sbjct:  173 ELVAEDEITQVKVKVLQSSVGEVTKSDVAIAGVSKAWILAFNVAANFQAQEDAREKGLEIGYYSIVYDILEEMESRMQEVLSPTPDGELVGKAEVKMVFDIGKVGKIAGCGVVDGDILKAGNVRVLRGPRIVYEGQLTTLKHVKEDVTKISAGSDCGMAFEEWEGMEEGDVVECYKI 349          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: W7T2T0_9STRA (Translation initiation factor if-2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2T0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.050e-50
Identity = 83/174 (47.70%), Postives = 126/174 (72.41%), Query Frame = 1
Query:   16 EDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYALE 537
            ED+      K+L SGVG +T++DVA+A VS A ++ FNV AD  A  EAR  G++I Y++V+Y+++D ++ ++ E++SPTP+G Y G A VKM+F IGKVG +AG  V DG + +G +V + R   I+++G L+TL+NVK+DVQ+M AG ECG+  + +EDF+ DDI+ECY ++
Sbjct:  519 EDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVD 692          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A7S2B294_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B294_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.200e-49
Identity = 91/173 (52.60%), Postives = 126/173 (72.83%), Query Frame = 1
Query:   16 EDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYAL 534
            ++E  R + K+L SGVG +T+SD+AIA VSNA+ + FNV    +A  +AR   ++IGYYSVVY+V+D+++ R+ E++SPTP+G YTG+A VK IF+IGKVG IAG  V DG V K A+  + R  RI+HEG LKTLK+VK DVQ M AG+ECG+  + +E+  E DI+E Y +
Sbjct:  608 KNEIARVKVKVLLSGVGDVTQSDLAIADVSNAWTIAFNVATIYQAQEDARNKNLEIGYYSVVYDVLDEMEVRMKEVLSPTPEGDYTGKAEVKAIFDIGKVGKIAGCAVLDGEVLKSANFRVLRGPRIVHEGRLKTLKHVKEDVQSMSAGSECGVNFQDWEEMMEGDIIESYVM 780          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A7S2PSJ2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSJ2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.410e-46
Identity = 82/179 (45.81%), Postives = 123/179 (68.72%), Query Frame = 1
Query:    1 SEMISEDEYFRARCKILPSGVGAITKSDVAIAAVS-NAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYAL 534
            +E+  E+E      K+L S  G ITKSD+A+A+V+ +  V+ FN GA+  A  +ARA+G+ I YYSVVY+ ++ ++ R+ E++SPTP+G Y G AIV+ +FNIG  GNIAGS   DG++ KG++V + R  +I+ E  +KTL+N KA+V  +  G ECGI +  +EDF+ DDI+E Y +
Sbjct:  172 TELRLENEEAEVGIKVLISEAGDITKSDIAVASVTPDTTVIAFNTGANAAAQDDARALGVPIEYYSVVYDAIESVECRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCRDGIIKKGSNVRVMRGDKILIESKVKTLRNFKAEVDAITTGDECGIGLLDYEDFEPDDIIESYVV 350          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A2M8CVQ4_9PROT (Translation initiation factor IF-2 n=1 Tax=Alphaproteobacteria bacterium CG_4_9_14_3_um_filter_47_13 TaxID=1973899 RepID=A0A2M8CVQ4_9PROT)

HSP 1 Score: 167 bits (423), Expect = 7.930e-45
Identity = 84/173 (48.55%), Postives = 116/173 (67.05%), Query Frame = 1
Query:   16 EDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYAL 534
            EDE      K+L SG G IT+SDV +A  S A ++GFNV A+ +A   A   GI+I YY+V+YN++DD+K  L  +++PT    Y G+A++K +F I K+GNIAG  V  G V +GA V L R   +IHEGTLKTLK  K +V+++  GTECG+  EG+ED +E DI+ECY +
Sbjct:  655 EDENEDVTIKVLHSGAGGITESDVTLANASGAIIIGFNVRANTQARALAEHEGIEIRYYNVIYNIIDDVKNILSGMLAPTKREQYLGQALIKQVFKITKIGNIAGCVVSIGSVKRGAKVRLLREDVVIHEGTLKTLKRHKDEVKEVKEGTECGMAFEGYEDIKEGDIIECYEI 827          
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Match: A0A4Q3FK89_9HYPH (Translation initiation factor IF-2 (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4Q3FK89_9HYPH)

HSP 1 Score: 156 bits (394), Expect = 3.800e-44
Identity = 76/167 (45.51%), Postives = 110/167 (65.87%), Query Frame = 1
Query:   37 RCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASREARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNIGKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMVAGTECGIQVEGFEDFQEDDILECYALE 537
            R ++L SGVGAIT+SDV +A  S A V+GFNV A +EA   A   G++I YY+++YN+MDD+K  +  L++PT      G A +  IF++ KVG IAG  V DG + +GA+V L R   ++HEG L  LK  K D +++VAG ECG+  E ++D +  D++ECY +E
Sbjct:   97 RARVLSSGVGAITESDVTLAQASGAVVLGFNVRAHKEAREAADRAGVEIRYYNIIYNLMDDVKDAMSGLLAPTLRETMLGNATILEIFSVSKVGKIAGCRVTDGTIERGANVRLIRDNVVVHEGKLSQLKRFKDDAKEVVAGQECGMSFENYQDMRAGDVIECYRVE 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51511.12414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJE9_ECTSI2.540e-9281.56PTIF2, plastid translation intiation factor 2 n=2 ... [more]
A0A835ZAQ9_9STRA8.560e-7264.61P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3Y8J2_HETAK3.820e-5655.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y1F3_9STRA1.370e-5352.33Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S2SSV4_9STRA7.740e-5348.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7T2T0_9STRA1.050e-5047.70Translation initiation factor if-2 n=3 Tax=Monodop... [more]
A0A7S2B294_9STRA2.200e-4952.60Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2PSJ2_9STRA6.410e-4645.81Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A2M8CVQ4_9PROT7.930e-4548.55Translation initiation factor IF-2 n=1 Tax=Alphapr... [more]
A0A4Q3FK89_9HYPH3.800e-4445.51Translation initiation factor IF-2 (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51511contigH-elongata_contig51511:719..3080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.3
Seed ortholog evalue1.2e-78
Seed eggNOG ortholog2880.D7FJE9
KEGG koko:K02519
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG0532@1,KOG1145@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPTIF2, plastid translation intiation factor 2
Ec32 orthologEc-14_006090.1
Exons4
Model size540
Cds size534
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51511.12414.1prot_H-elongata_contig51511.12414.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51511 725..3080 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.4590254-UTR-H-elongata_contig51511:718..7241622930842.4590254-UTR-H-elongata_contig51511:718..724Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51511 719..724 +
1691679593.734431-UTR-H-elongata_contig51511:718..7241691679593.734431-UTR-H-elongata_contig51511:718..724Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51511 719..724 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.4743915-CDS-H-elongata_contig51511:724..9481622930842.4743915-CDS-H-elongata_contig51511:724..948Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 725..948 +
1691679593.746318-CDS-H-elongata_contig51511:724..9481691679593.746318-CDS-H-elongata_contig51511:724..948Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 725..948 +
1622930842.4902112-CDS-H-elongata_contig51511:1467..15491622930842.4902112-CDS-H-elongata_contig51511:1467..1549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 1468..1549 +
1691679593.7612278-CDS-H-elongata_contig51511:1467..15491691679593.7612278-CDS-H-elongata_contig51511:1467..1549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 1468..1549 +
1622930842.509145-CDS-H-elongata_contig51511:2073..22411622930842.509145-CDS-H-elongata_contig51511:2073..2241Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 2074..2241 +
1691679593.7753794-CDS-H-elongata_contig51511:2073..22411691679593.7753794-CDS-H-elongata_contig51511:2073..2241Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 2074..2241 +
1622930842.5275667-CDS-H-elongata_contig51511:3020..30801622930842.5275667-CDS-H-elongata_contig51511:3020..3080Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 3021..3080 +
1691679593.7939012-CDS-H-elongata_contig51511:3020..30801691679593.7939012-CDS-H-elongata_contig51511:3020..3080Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51511 3021..3080 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51511.12414.1

>prot_H-elongata_contig51511.12414.1 ID=prot_H-elongata_contig51511.12414.1|Name=mRNA_H-elongata_contig51511.12414.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MISEDEYFRARCKILPSGVGAITKSDVAIAAVSNAFVVGFNVGADQEASR
EARAIGIDIGYYSVVYNVMDDIKKRLDELVSPTPDGVYTGRAIVKMIFNI
GKVGNIAGSTVEDGVVNKGASVLLKRRGRIIHEGTLKTLKNVKADVQQMV
AGTECGIQVEGFEDFQEDDILECYALE*
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mRNA from alignment at H-elongata_contig51511:719..3080+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51511.12414.1 ID=mRNA_H-elongata_contig51511.12414.1|Name=mRNA_H-elongata_contig51511.12414.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2362bp|location=Sequence derived from alignment at H-elongata_contig51511:719..3080+ (Himanthalia elongata Himel1 dioecious)
AGTGAGATGATCTCGGAGGACGAGTACTTCCGGGCGAGGTGCAAGATCCT TCCGTCGGGAGTCGGGGCGATCACGAAGAGCGACGTGGCCATCGCCGCCG TCAGCAACGCGTTCGTGGTGGGGTTCAACGTTGGCGCGGACCAGGAGGCG TCGAGGGAGGCCAGGGCGATCGGGATCGACATCGGCTACTACAGCGTCGT CTATAATGTGATGGACGACATCAAGAAGAGGTAGATGAGAGAGGGAGAGA GAGAGAGAGAGGCAGACAAAGAGAGAGGAATAACCCGCGTGAGCGTTATA TATATGTGTTGGTGCGTGTATCGACTAGAATCTGAATTGTTTTTTAGTTT TTGGGGCAGTGTCATTGAACGGTTAAGTTATGTTGAGCGGTTTTGAGGCA TCGATGGCTTACACAGCTAGTAAGTATATTTTGTGCGTGCGGCAAGCTGC GCGCAGAGGTATTCTGCGTTTTGAATCTCGGTAAAAAGGTTGTGCGGGGA AAAGCGCGATAATTCGAGTAAGCAAGAGAGGGAGTGATCTATAATTTGCG ACCGAAACGATGTGGCTGCGAGGGAGAGAAGAAATAGGGTTCAGGCAACT GTCGAAGGGGAAAAGGACCACGAACGCGTTTGATAACCTCGGGCTTCGGT TGTAACACCGCCCCCCGCCCATAGCCAAATCGTAATTCCCCTTTCTCTGA TCGCTGATCGCCGTTCTTCTTTTTACTTTTATGGTGTGTGGCACGCAAGG CTCGACGAGCTGGTGTCTCCGACTCCCGACGGGGTCTACACGGGCCGGGC GATCGTCAAGATGATCTTCAACATCGGCAAGGTCAGCGAGAAGACAACAA GAAATGGCGGTGGCGTGTAGCGTCGCGGATCGACTGCAGTTCGTTCCGTA CCATCACCACGTTCCCCTTCCCTACCCCTCCCTTACGCGATTTGCTTTCC GAAACATGCCTGTTTACAACGGAAATCCCCCTCTTGCGAATAGTTTCGAC CCAGCGATCGAAAGAAACGATTGTTAGCACAACTCTGTATTTAGCGGTTT TTACTGTATTTTTGTACTTAACGGAATTCAAGAATTGATGGAGCATTTGG CGGCGCAAGATCGGATCGATGCACGTGCTGTGCTTGAGATCCCCCCCCCC GCCCCACCCATACAAACACAACACACACCTCCTCTTCCCCCCCAAATAAC ACAAAACAAAGGAGGAAAAAAACACAGAACANNNNNNNNNNTTGGCGGCG CAAGATCGGATCGATGCACGTGCTGTGCTTGAGATCCCCCCCCCCTCCCC CCCCCAAATATAACGCCCTCCTTCTCTCTCTTCCCCCCAAACTAAAACAA AACAGGTGGGGAACATCGCAGGGAGCACCGTCGAGGACGGGGTCGTGAAC AAGGGGGCCAGCGTGCTACTGAAACGGCGGGGACGCATCATTCACGAGGG CACGCTGAAGACGCTCAAGAACGTCAAGGCGGACGTGCAGCAGATGGTCG CGGGGACGGAGTGCGGTATTCAGGTGCTTGTGTGTGTGTGTTTGTTTATT AAATTGCACATAACCGCTCTCCATGCTCTTAGGTATTCCAAGCTACACGA TTGGTCCTCCCAATGGGGAATCAATCATTTTGCTACAAAAAACATCTGAT CAGACGTGGCAAAAGGTGACATATCTAGAGTAGCTAAATCCTCAGTCCTC AGTGTATGTGCGTAGGCGTATTCATTACATTTCCCGTAACCGCGCAATCC GGCAAAAGGTGACATACTCAATGTTGCGTTATGTGTGCGCGCGTGCGTTT ATGTGCAATTTAATAAACATTGTTGTAAGAGCCCAAGACATCCGTCGCTG AAAAAATTAAGGCGTTCGTTGAAGTGATAATATTTTACTCAACGCTTCAG TTGCAAAATCGTTTTTGTTGTGTGTGGGTTTGGTGGTTGTTTGGCAATTT GGATTGGATCTGCCGGCCCCGCCCCGCCGCCGTGTTTTTTTAACAAGGAA AACAACAGCAGAATGCAGATCAACGAGTCGATCGAAGTAATCACTACGGT TGTAAAATATTATTAATATTATTAGACGATTTGTACAAGTCGGCGTATTC CTCTCTTGCTGTAGTCGTTATGTGTTTTCGTTTGGCCTACGCGGCTGCTG CTCGTACAGTAGCTCAAAACAATGGTTGTTTGCCCCCTTTCCTCCCGTTG AACAGGCCAACAATGGTCAAAAGCGCGATGCACGTTTCTCGTCCGCAGCG ACGCTCGCGGCAATTGACGTCACTTCTCGTATTGCGTGTACCGCTCGGAC AGGTGGAGGGCTTCGAAGACTTCCAAGAGGACGACATCCTCGAGTGCTAC GCGCTTGAGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig51511:719..3080+

>mRNA_H-elongata_contig51511.12414.1 ID=mRNA_H-elongata_contig51511.12414.1|Name=mRNA_H-elongata_contig51511.12414.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1068bp|location=Sequence derived from alignment at H-elongata_contig51511:719..3080+ (Himanthalia elongata Himel1 dioecious)
ATGATCTCGGAGGACGAGTACTTCCGGGCGAGGTGCAAGATCCTTCCGTC
GGGAGTCGGGGCGATCACGAAGAGCGACGTGGCCATCGCCGCCGTCAGCA
ACGCGTTCGTGGTGGGGTTCAACGTTGGCGCGGACCAGGAGGCGTCGAGG
GAGGCCAGGGCGATCGGGATCGACATCGGCTACTACAGCGTCGTCTATAA
TGTGATGGACGACATCAAGAAGAGATGATCTCGGAGGACGAGTACTTCCG
GGCGAGGTGCAAGATCCTTCCGTCGGGAGTCGGGGCGATCACGAAGAGCG
ACGTGGCCATCGCCGCCGTCAGCAACGCGTTCGTGGTGGGGTTCAACGTT
GGCGCGGACCAGGAGGCGTCGAGGGAGGCCAGGGCGATCGGGATCGACAT
CGGCTACTACAGCGTCGTCTATAATGTGATGGACGACATCAAGAAGAGGC
TCGACGAGCTGGTGTCTCCGACTCCCGACGGGGTCTACACGGGCCGGGCG
ATCGTCAAGATGATCTTCAACATCGGCAAGGCTCGACGAGCTGGTGTCTC
CGACTCCCGACGGGGTCTACACGGGCCGGGCGATCGTCAAGATGATCTTC
AACATCGGCAAGGTGGGGAACATCGCAGGGAGCACCGTCGAGGACGGGGT
CGTGAACAAGGGGGCCAGCGTGCTACTGAAACGGCGGGGACGCATCATTC
ACGAGGGCACGCTGAAGACGCTCAAGAACGTCAAGGCGGACGTGCAGCAG
ATGGTCGCGGGGACGGAGTGCGGTATTCAGGTGGGGAACATCGCAGGGAG
CACCGTCGAGGACGGGGTCGTGAACAAGGGGGCCAGCGTGCTACTGAAAC
GGCGGGGACGCATCATTCACGAGGGCACGCTGAAGACGCTCAAGAACGTC
AAGGCGGACGTGCAGCAGATGGTCGCGGGGACGGAGTGCGGTATTCAGGT
GGAGGGCTTCGAAGACTTCCAAGAGGACGACATCCTCGAGTGCTACGCGC
TTGAGTAGGTGGAGGGCTTCGAAGACTTCCAAGAGGACGACATCCTCGAG
TGCTACGCGCTTGAGTAG
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