mRNA_H-elongata_contig127421.2031.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 193 bits (490), Expect = 6.950e-50 Identity = 103/267 (38.58%), Postives = 155/267 (58.05%), Query Frame = 1
Query: 7 RLDPEPTAMGEAQASSEWPQWKRVIAREMDGKLA*GVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG 807
++D P ++ EA+AS EW +WK+ + EM G + + P G+ +G + VF +K D+DG I +YK LVAQG+ Q+ G+ Y E+ +P S+R L + A E Q+DV YL E+EEEIY+ PE Y D +V L+K +YGL +G W ++F +L + GF + +AD CV++RI G + + I V++DDLL+ S T D + +L + F +KDLGE + I RDR GT++ Q QYI+ + RFG
Sbjct: 874 KIDNFPRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTI-ITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFG 1139
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 190 bits (482), Expect = 7.490e-49 Identity = 145/486 (29.84%), Postives = 229/486 (47.12%), Query Frame = 1
Query: 64 QWKRVIAREMDGKLA*GVWQVVER-PNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*RRPASF-------------------RPWQPANG---------RRG*RNAPDFLPRNRWGPNVGRGDG--QGRHFIRCAPTGEIQQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIGIRRAG*DSKRVAFPTT-------GQGVHD------------PPIDVA-IKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
QW I +EMDG G + +E+ P G+ + T+ VF K D+ G I +K LVA+GF QV G Y SSS P+ +SI++ + G R D+ Y A+++EE+YV + + +V +++A+YGL +G W + L G+++ +AD CVFR+I+ G VV +IV+Y+DD++ V + + + ++ L P+KDLGE ++Y C I RD GT T Q YI + +RFG AS +P + A G R A + + RN P + Q ++ I G+ + A RD RR G G G V + A + V+ T+ G+GV + P A IK+ +N+GAI + +N FSS R++H+D++ H +R++ + G + VEY+ EQ+AD+LTK+
Sbjct: 750 QWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEE-EGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVG---GTV---VSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKA 1228
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 190 bits (482), Expect = 8.490e-49 Identity = 145/486 (29.84%), Postives = 229/486 (47.12%), Query Frame = 1
Query: 64 QWKRVIAREMDGKLA*GVWQVVER-PNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*RRPASF-------------------RPWQPANG---------RRG*RNAPDFLPRNRWGPNVGRGDG--QGRHFIRCAPTGEIQQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIGIRRAG*DSKRVAFPTT-------GQGVHD------------PPIDVA-IKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
QW I +EMDG G + +E+ P G+ + T+ VF K D+ G I +K LVA+GF QV G Y SSS P+ +SI++ + G R D+ Y A+++EE+YV + + +V +++A+YGL +G W + L G+++ +AD CVFR+I+ G VV +IV+Y+DD++ V + + + ++ L P+KDLGE ++Y C I RD GT T Q YI + +RFG AS +P + A G R A + + RN P + Q ++ I G+ + A RD RR G G G V + A + V+ T+ G+GV + P A IK+ +N+GAI + +N FSS R++H+D++ H +R++ + G + VEY+ EQ+AD+LTK+
Sbjct: 1303 QWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEE-EGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVG---GTV---VSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKA 1781
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 187 bits (476), Expect = 4.610e-48 Identity = 143/483 (29.61%), Postives = 230/483 (47.62%), Query Frame = 1
Query: 67 WKRVIAREMDGKLA*GVWQVVE-RPNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*----RRPASFRPWQPANGRRG*RNAPDFLPRNR-----WGPNVGRGD------GQGRH-----------------FIRCAPTGEIQQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIGIRR---AG*DSKRVAFPTTGQGVHDPPIDVA-------------IKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
W++ + E +G L G + V+ P G+ + ++ F K +K+G+I+ +K LVA+GF Q+ + Y SSSP PS ASI+++L + G DV Y A ++EE++++LP D ++ ++A+YGL +G W L GF++ +AD CVFR+++ VVV++IV+Y+DD+LV + + D ++ L FP K+LGE ++ C I RD AGTL Q YI +M ERF R PA+ P +R ++ R W R D RH +++ I Q G+ A+++ S + RR G G G VV G + S + G+GV + A IK+ +N+GAI + +N SS RT+H+D+++H +R + G + V++V EQ+AD+LTK+
Sbjct: 752 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPAT--PGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGL-GLAVYVDASYADTEDRRSVSGLATTVG--GTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKA 1228
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 187 bits (476), Expect = 5.070e-48 Identity = 143/483 (29.61%), Postives = 230/483 (47.62%), Query Frame = 1
Query: 67 WKRVIAREMDGKLA*GVWQVVE-RPNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*----RRPASFRPWQPANGRRG*RNAPDFLPRNR-----WGPNVGRGD------GQGRH-----------------FIRCAPTGEIQQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIGIRR---AG*DSKRVAFPTTGQGVHDPPIDVA-------------IKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
W++ + E +G L G + V+ P G+ + ++ F K +K+G+I+ +K LVA+GF Q+ + Y SSSP PS ASI+++L + G DV Y A ++EE++++LP D ++ ++A+YGL +G W L GF++ +AD CVFR+++ VVV++IV+Y+DD+LV + + D ++ L FP K+LGE ++ C I RD AGTL Q YI +M ERF R PA+ P +R ++ R W R D RH +++ I Q G+ A+++ S + RR G G G VV G + S + G+GV + A IK+ +N+GAI + +N SS RT+H+D+++H +R + G + V++V EQ+AD+LTK+
Sbjct: 1131 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPAT--PGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGL-GLAVYVDASYADTEDRRSVSGLATTVG--GTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKA 1607
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 187 bits (476), Expect = 5.140e-48 Identity = 143/483 (29.61%), Postives = 230/483 (47.62%), Query Frame = 1
Query: 67 WKRVIAREMDGKLA*GVWQVVE-RPNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*----RRPASFRPWQPANGRRG*RNAPDFLPRNR-----WGPNVGRGD------GQGRH-----------------FIRCAPTGEIQQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIGIRR---AG*DSKRVAFPTTGQGVHDPPIDVA-------------IKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
W++ + E +G L G + V+ P G+ + ++ F K +K+G+I+ +K LVA+GF Q+ + Y SSSP PS ASI+++L + G DV Y A ++EE++++LP D ++ ++A+YGL +G W L GF++ +AD CVFR+++ VVV++IV+Y+DD+LV + + D ++ L FP K+LGE ++ C I RD AGTL Q YI +M ERF R PA+ P +R ++ R W R D RH +++ I Q G+ A+++ S + RR G G G VV G + S + G+GV + A IK+ +N+GAI + +N SS RT+H+D+++H +R + G + V++V EQ+AD+LTK+
Sbjct: 1151 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPAT--PGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGL-GLAVYVDASYADTEDRRSVSGLATTVG--GTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKA 1627
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 187 bits (476), Expect = 5.210e-48 Identity = 143/483 (29.61%), Postives = 230/483 (47.62%), Query Frame = 1
Query: 67 WKRVIAREMDGKLA*GVWQVVE-RPNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*----RRPASFRPWQPANGRRG*RNAPDFLPRNR-----WGPNVGRGD------GQGRH-----------------FIRCAPTGEIQQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIGIRR---AG*DSKRVAFPTTGQGVHDPPIDVA-------------IKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
W++ + E +G L G + V+ P G+ + ++ F K +K+G+I+ +K LVA+GF Q+ + Y SSSP PS ASI+++L + G DV Y A ++EE++++LP D ++ ++A+YGL +G W L GF++ +AD CVFR+++ VVV++IV+Y+DD+LV + + D ++ L FP K+LGE ++ C I RD AGTL Q YI +M ERF R PA+ P +R ++ R W R D RH +++ I Q G+ A+++ S + RR G G G VV G + S + G+GV + A IK+ +N+GAI + +N SS RT+H+D+++H +R + G + V++V EQ+AD+LTK+
Sbjct: 1294 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPAT--PGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGL-GLAVYVDASYADTEDRRSVSGLATTVG--GTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKA 1770
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE) HSP 1 Score: 183 bits (464), Expect = 7.360e-48 Identity = 133/437 (30.43%), Postives = 211/437 (48.28%), Query Frame = 1
Query: 79 IAREMDGKLA*GVWQVVE-RPNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*RRPASFRPWQPANGRRG*RNAPDFLPRNRWGPNVGRGDGQGRHFIRCAPTGEIQQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIGIRRA-----G*DSKRVAFPTTGQGVHDPPID-VAIKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
+ E++G L G + V+ P G+ + + F K + +G+I K+K LVA+GF ++ + Y SSSP PS ASI+++L + G DV Y A ++EEI++ LP D ++ ++A+YGL +G W L GF++ +AD CVFR+++ VVV++IV+Y+DD+LV + + D ++ L FP K+LGE ++ RC I RD AGTL Q YI M +RF + + PA+ P GP R D +G + P + G TE + G R HL G G R +V + A G K F P +I++ + +GAI + +N S RT+H+D++ H +R + G + V++V EQ+ D++TK+
Sbjct: 181 MREELEGHLGTGTFSFVDDAPEGRRPVSPKWCFSWKTNNEGKIHKFKARLVARGFSKIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVAESDE-DCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQSTSRI----PAS------------PGVDLGPK--RDDEKGGEW----PVXAL----GCHTEDPRLPERDEGPRHHLPTGIGVRACRS-----IVSLSSTEAECIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDKQGAIALVQNPLSPGRTKHIDVRFHFIRGLFRSGDISVKFVPTTEQHTDLVTKA 585
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU) HSP 1 Score: 184 bits (466), Expect = 1.020e-46 Identity = 153/511 (29.94%), Postives = 236/511 (46.18%), Query Frame = 1
Query: 10 LDPEPTAMGEAQASSEWPQWKRVIAREMDGKLA*GVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*R--RPASF------------------RPWQPANG---------RRG*RNAPDFLPRNRWGPNVGRGDGQGRHF--IRCAPTGEIQQQPGTDTESAAIFMAHSGSR----DHLRRGTGGRGNEKGNGGGVV-----RIGIRRAG*DSKRVAFPTTGQGV------------------HDPPIDVAIKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
LD EP EA + + WK A E+ ++ VE+P G+ V+G + VFK K DG IEKYK LVA+GF QV+GI Y ++ +P ASIR VL + A + Q+DV +L +++EEIY+ P + V L+K++YGL A W KK E E GF+RS AD +F ++ +GV+++ I +Y+DD+L+ + D L F + DLG A + L I RDR TL+ Q QYI+ + ER G RP S +P+Q A G R A L ++ P R F +R + + +P ++ + A + + + + RR T G+ +GG V + I ++ +++ VA + + P V + +N+ A+ +AKN RT+H+ ++HH +RD IE G + EYV +Q AD+LTK+
Sbjct: 985 LDGEPLTYEEAMSRPDADMWKAACAEELFAFAKAELYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVILI-IALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKPYQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFL-HGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASISRSSPGSKVTPLLLVDNQSAMALAKNSTFHDRTKHIAVRHHFIRDEIERGTLEAEYVPTDDQVADVLTKA 1493
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.970e-46 Identity = 144/510 (28.24%), Postives = 236/510 (46.27%), Query Frame = 1
Query: 10 LDPEPTAMGEAQASSEWPQWKRVIAREMDGKLA*GVWQVVER-PNGKTVLGTRVVFKRKIDKDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTPSQASIRMVLDMIAALG*EARQLDVDMTYLEAEVEEEIYVELPEAYRDSRKQVRILKKAMYGLVHAGLLW*KKFGIELEAKGFQRSQADRCVFRRILHGVVVVVIVVYIDDLLVVSATKGDKDQAARDLCSCFPIKDLGEASYYLRCHITRDRNAGTLTFDQHQYIQAMAERFG*RRPASFRPWQPANGRRG*R-----------------------------NAPDFLPRNRWGPNVGRGDGQGRHFIRCAPTGEI----QQQPGTDTESAAIFMAHSGSRDHLRRGTGGRGNEKGNGGGVVRIG---IRRAG*DSKRVAFPTT-------GQGVHDPPI-------------DVAIKIR*ENEGAIKMAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 1368
++PEP + EA S W + ++ E++G + G + + + P G V+ R VFK K D+ G+I K K LVA+GF+Q G+ Y E+ SPT + ASIR+V+ + E LD++ + +++++ E+ ++LP ++ L K++YGL A + K+ +L GF++S +D CV R ++ V+ +I +++DD+L + TK + L P K+LGE ++L C +RDR AGT+ Q YI+++ ERF R +S P PAN R NA + R+ P + T + +Q D + A S+ RR G +V + + K V+ T+ G GV + I + +NEGAI +A+N SS R++H+D++HH +R++ E GV+ V +V KEQ+ADILTK+
Sbjct: 209 VEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILY-AGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSI-PASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGA---------LVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKA 707 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig127421.2031.1 >prot_H-elongata_contig127421.2031.1 ID=prot_H-elongata_contig127421.2031.1|Name=mRNA_H-elongata_contig127421.2031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKSVback to top mRNA from alignment at H-elongata_contig127421:374..1854+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig127421.2031.1 ID=mRNA_H-elongata_contig127421.2031.1|Name=mRNA_H-elongata_contig127421.2031.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1481bp|location=Sequence derived from alignment at H-elongata_contig127421:374..1854+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig127421:374..1854+ >mRNA_H-elongata_contig127421.2031.1 ID=mRNA_H-elongata_contig127421.2031.1|Name=mRNA_H-elongata_contig127421.2031.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=294bp|location=Sequence derived from alignment at H-elongata_contig127421:374..1854+ (Himanthalia elongata Himel1 dioecious)back to top |