prot_H-elongata_contig127421.2031.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig127421.2031.1
Unique Nameprot_H-elongata_contig127421.2031.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length49
Homology
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A2K3K827_TRIPR (Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K827_TRIPR)

HSP 1 Score: 55.8 bits (133), Expect = 5.880e-9
Identity = 23/48 (47.92%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 48
            ++KN     RT+H+DI+HH +RD++E GVV +E++  +EQ ADI TK+
Sbjct:   21 ISKNPIQHSRTKHIDIRHHFIRDLVEEGVVKLEHIATEEQLADIFTKA 68          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A834GWK5_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GWK5_RHOSS)

HSP 1 Score: 55.8 bits (133), Expect = 2.010e-8
Identity = 22/49 (44.90%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKSV 49
            M+KN     RT+H++++HH +RD+++ G + +E+V  KEQ ADI+TK+V
Sbjct:   84 MSKNSVFHGRTKHIELRHHFIRDLVQNGEIQLEFVNTKEQLADIMTKAV 132          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A1Y1MJE9_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MJE9_PHOPY)

HSP 1 Score: 57.0 bits (136), Expect = 3.490e-8
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    8 SRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 48
            +RRT+H+DIKHH +RD +E   +H++Y+   EQ ADILTKS
Sbjct:  930 TRRTKHIDIKHHYIRDCVESERIHIQYIPSNEQQADILTKS 970          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A834LDQ2_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LDQ2_RHOSS)

HSP 1 Score: 55.8 bits (133), Expect = 3.780e-8
Identity = 22/49 (44.90%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKSV 49
            M+KN     RT+H++++HH +RD+++ G + +E+V  KEQ ADI+TK+V
Sbjct:  126 MSKNSVFHGRTKHIELRHHFIRDLVQNGEIQLEFVNTKEQLADIITKAV 174          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A182GEQ3_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GEQ3_AEDAL)

HSP 1 Score: 53.1 bits (126), Expect = 3.780e-8
Identity = 23/48 (47.92%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 48
            MAKN   S+RT+H+D+KHH +RD++  G++ VE +  ++Q AD+ TKS
Sbjct:    1 MAKN-LESKRTKHIDVKHHFIRDLVASGMLIVESIGTRDQLADLFTKS 47          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A0A9YPH4_LYGHE (Copia protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YPH4_LYGHE)

HSP 1 Score: 56.6 bits (135), Expect = 4.610e-8
Identity = 24/47 (51.06%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTK 47
            +A+NR +S+R +H+DIKHH +R+ ++ GV+ + YV   EQ ADILTK
Sbjct:  280 LARNRENSKRIKHIDIKHHFIREKVDEGVIKLNYVSTSEQNADILTK 326          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.950e-8
Identity = 24/48 (50.00%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 48
            +A+N  SS R++H+D++HH +R++ E GV+ V +V  KEQ+ADILTK+
Sbjct:  193 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKA 240          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 6.450e-8
Identity = 24/48 (50.00%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 48
            +A+N  SS R++H+D++HH +R++ E GV+ V +V  KEQ+ADILTK+
Sbjct:  320 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKA 367          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 6.520e-8
Identity = 24/48 (50.00%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 48
            +A+N  SS R++H+D++HH +R++ E GV+ V +V  KEQ+ADILTK+
Sbjct:  660 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKA 707          
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 6.520e-8
Identity = 24/48 (50.00%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKS 48
            +A+N  SS R++H+D++HH +R++ E GV+ V +V  KEQ+ADILTK+
Sbjct:  487 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKA 534          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127421.2031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2K3K827_TRIPR5.880e-947.92Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium p... [more]
A0A834GWK5_RHOSS2.010e-844.90Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A1Y1MJE9_PHOPY3.490e-856.10Integrase catalytic domain-containing protein (Fra... [more]
A0A834LDQ2_RHOSS3.780e-844.90Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
A0A182GEQ3_AEDAL3.780e-847.92Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]
A0A0A9YPH4_LYGHE4.610e-851.06Copia protein n=1 Tax=Lygus hesperus TaxID=30085 R... [more]
A0A6H5KCG6_9PHAE4.950e-850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE7_9PHAE6.450e-850.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE6.520e-850.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JP36_9PHAE6.520e-850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig127421contigH-elongata_contig127421:1708..1854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig127421.2031.1mRNA_H-elongata_contig127421.2031.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig127421 374..1854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig127421.2031.1 ID=prot_H-elongata_contig127421.2031.1|Name=mRNA_H-elongata_contig127421.2031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
MAKNRFSSRRTRHVDIKHHLVRDVIEGGVVHVEYVRPKEQYADILTKSV
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