mRNA_H-elongata_contig116576.1300.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 236 bits (603), Expect = 7.570e-69 Identity = 137/361 (37.95%), Postives = 205/361 (56.79%), Query Frame = 1
Query: 7 EPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVF-RRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVTKT-SIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITYG 1077
+P ++ EA S+EWP+WK AI +EM G + +VE PK ++G++ VF+ K + + IE YK RLVAQGF QV GI ++E+ +P ASI ++L++ A WE Q+DV AYL D+EEE+Y++ P + K+ V LK+ + GL +G + KK EL + RS+ D CVF R V++ VDD +A TK R++ + + DLGE + LG + DR+ TL+ QH YI + RF + S+ + G LS P T + E+M IPYRE++G+LM+AA TRP+I++A L++F NPG HW AA++ + L TR+ +T+G
Sbjct: 111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIA-GTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFG 470
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 240 bits (613), Expect = 2.030e-67 Identity = 129/356 (36.24%), Postives = 205/356 (57.58%), Query Frame = 1
Query: 7 EPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQVGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVFRRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVTKTSIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITY 1074
EP ++ EAQAS EWP+W++A+ E D G W++ + PK++ +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P SIR +L++ WE Q+DV AYL D++EE+Y+ PE + D ++ L+K + GL +G W +K EL ++R +ADPCV+ V +VDDLL+ T + + E+ RDL + DLGE +G I DR AG + Q YI+++ +R+ + + + + ++ +EE ++ Y +VG+LM+AA TRP+IS+A L+K++ P P HW AA++ L+ L TRDL ITY
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDE--NEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITY 1259
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 239 bits (610), Expect = 5.160e-67 Identity = 140/361 (38.78%), Postives = 206/361 (57.06%), Query Frame = 1
Query: 7 EPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVF-RRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVTKT-SIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITYG 1077
+P ++ EA S+EWP+WK AIA+EM G + +VE PK ++G++ VF+ K + +G IE YK RLVAQGF QV GI ++E+ +P ASIR++L++ A WE Q+DV AYL D+EEE+Y+ P + K+ V LK+ + GL +G + KK EL + RS+ D CVF R V++ VDD +A TK R++ + + DLGE + LG + DR+A TL+ Q YI + RF + S+ + G LS P T + E+M IPYRE +G+LM+AA TRP+I++A L++F NPG HW AA++ + L TR+ +T+G
Sbjct: 921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIA-GTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFG 1280
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A2P6SMQ0_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SMQ0_ROSCH) HSP 1 Score: 232 bits (591), Expect = 5.940e-66 Identity = 133/362 (36.74%), Postives = 209/362 (57.73%), Query Frame = 1
Query: 1 DPEPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVFRRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVTKTSI--IPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITY 1074
D +PT+ +A S++ W +A+ E+D GVW++V+ + +G + VFK K D G IE++K RLVA+GF Q +GI++ E+ SP + S R++++++A E Q+DV A+L ++EEE+++ PE + ++ K+ V LKK++ GL A W KKF + + F + D CV+ +++ G YVDD+L+A++ + + L S +K+LGEASY LG I DR G L Q YI + +RFG+ + +P G K L+K+ P+T+ E EM IPY +VG+LM+A TRP++SFA L++F NPG HW A +K L+ L RT+D + Y
Sbjct: 245 DNDPTSFKQATGSNDSDAWTQAMIAELDSMYKNGVWELVKPKENHKPIGCKWVFKTKRDVSGNIERHKARLVAKGFTQKEGIYFTETFSPVSTKDSFRIIMALVAHYDMELHQMDVKTAFLNGELEEEIFMVQPEGFIEAGKENMVCRLKKSIYGLKQASRQWYKKFDSVVSSFGFTENLVDECVYLKVV-GNNFIFLILYVDDILLASSNVKLLKDTKAFLSSNFDMKELGEASYVLGIEIKRDRKQGLLGLSQQNYISKILKRFGMETCANGEVPMSKGDK-LTKNQCPKTENEKTEMESIPYARLVGSLMYAQVCTRPDLSFAVGMLSRFQSNPGHEHWTAGKKVLRYLQRTKDYMLVY 604
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 226 bits (577), Expect = 9.090e-66 Identity = 137/366 (37.43%), Postives = 200/366 (54.64%), Query Frame = 1
Query: 7 EPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRD--SRKQVGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVFRRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIK----DLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVTKTSIIPFVVGGK-TLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITYGGE 1083
EP T+ EA+AS EWPQW+ AI E+ G W++ E+P V+G+ VFK K D G I KYK RLVAQGF Q+ G+ Y ++ +P +SIR++ ++ A WE Q+DV AYL D+EEE++++ P + ++V L K + GL AG W KK F RS D VF R + VDDL +A A DE ++ S L +K DLGE + LG I DR T++ Q YI T+ RF + + + +L+ SP T ++ ++M I YRE +G+LM+AA TRP++S+A L++F NPG HW AA++ ++ L T++ +TYGG+
Sbjct: 29 EPRTVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIA-ANSVDEMSHIK---SALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGD 390
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.530e-64 Identity = 133/368 (36.14%), Postives = 202/368 (54.89%), Query Frame = 1
Query: 10 PTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRD---------SRKQVGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVFRRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGV--TKTSIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITYGG 1080
P T EA + +WK+AIA E+ V W++V +P + +G R VF K ++ G++ +YK RLVA+G+ Q GI Y+E+ SP S+R +L+ A G E Q DVD A+L ++EEE+Y+ELPE R+ V +L +++ GL A +W + L++ F+ + ADPCV+ R G YVDD+L+A+ K + IKDLG A + +G I +D TL Q Y +++ ++FG K + P G + L+K+D PQT+E+ +M PYR +VG+LM+ A TRP+IS A L++F +NPG HW A K ++ L +T+D+GI Y G
Sbjct: 66 PKTYAEATTRHDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDG 431
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY) HSP 1 Score: 231 bits (589), Expect = 2.890e-64 Identity = 137/361 (37.95%), Postives = 203/361 (56.23%), Query Frame = 1
Query: 7 EPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVF-RRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVTKT-SIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITYG 1077
+P ++ EA S+EWP+W AIA+EM G + +VE PK ++G++ VF+ K + +G IE YK RLVAQGF QV GI ++E+ +P ASIR++L++ A WE Q+DV YL D+EEE+Y+ P + K+ V LK+ + GL +G + KK EL + RS+ D C+F R V++ VDD +A TK R++ + DLGE + LG + DR+A TL+ Q YI + RF + S+ + G LS P T + E+M IPYRE +G+LM+AA TRP+I++A L++F NPG HW AA++ + L TR+ +T+G
Sbjct: 744 DPASLNEAMQSTEWPKWTEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIFWLRNEEDVLILLIALSVDDSTIA-GTKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMKNPGRPHWEAAKRVFRYLAGTRERWLTFG 1103
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 230 bits (587), Expect = 6.180e-64 Identity = 139/362 (38.40%), Postives = 208/362 (57.46%), Query Frame = 1
Query: 16 TMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEA--DVEEEVYVELPE--AYRDSRKQVGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVFRRI-LHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVT--KTSIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITYGG 1080
T+ EA+ +WP+W AI E++ + G W++V+RP V+G++ V + K D G I+KYK RLVAQGF Q+ GI Y E+ +P +SIR++L++ A GW+ + D + AYL + D +E +Y+E P A +D + V L+KA+ GL G W + I L F R+++D VF I + + V +VDD + ++ + R + P+ DLGE S+ LG + DR A TL+ QH YI ++ RF T K S IP + L+KS P + ++ M +IPYRE +G+LM+AA TRP+ISFA LA+FS NPG THW A ++ + L T++L + YGG
Sbjct: 965 TLEEARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVFFAIDANNITVLAI--HVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIP-MDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGG 1323
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A445FBE9_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FBE9_GLYSO) HSP 1 Score: 230 bits (586), Expect = 8.600e-64 Identity = 137/360 (38.06%), Postives = 201/360 (55.83%), Query Frame = 1
Query: 7 EPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVFRRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVT--KTSIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITY 1074
+P T +A +S E W A+ EMD VW +VE P +G R VFK K D +G IE++K RLVA+GF Q +GI Y E+ SP + S+R++L+++A E Q+DV A+L D+EEEVY++ PE + S + V L K++ GL A W KF + + F+ + D C+++++ G + YVDD+L+AT K + + L +KD+GEASY +G I +R+ G L Q YI + ERF + S+ P V G K L+ S P+ D E E M IPY VG+LM+A TRP+I+FA L ++ NPG HW+AA+K ++ L T+D + Y
Sbjct: 1045 DPETFSQAMSSKESNLWYNAMRDEMDSMASNQVWDLVELPVGVKAIGCRWVFKTKKDSEGNIERHKARLVAKGFTQREGIDYRETFSPVSKKDSLRVILALVAHFDLELHQMDVKTAFLNGDLEEEVYMKQPEGFLSSVGEHLVCKLNKSIYGLKQASRQWYLKFHEVISSFSFEENVMDHCIYQKV-SGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKGDK-LALSQCPKNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGIDHWKAAKKVMRYLQGTKDYMLMY 1402
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A445FAJ6_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445FAJ6_GLYSO) HSP 1 Score: 230 bits (586), Expect = 9.220e-64 Identity = 137/360 (38.06%), Postives = 201/360 (55.83%), Query Frame = 1
Query: 7 EPTTMGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAGLLW*KKFGIELEAKVFQRSQADPCVFRRILHGVVVXXXXXYVDDLLVATATKRDEEQAVRDLCSCLPIKDLGEASYYLGYHITWDRNAGTLTFDQHQYIQTMAERFGVT--KTSIIPFVVGGKTLSKSDSPQTDEEVEEMCQIPYREIVGALMWAATMTRPNISFAAH*LAKFSDNPGPTHWRAAQKALQNLWRTRDLGITY 1074
+P T +A +S E W A+ EMD VW +VE P +G R VFK K D +G IE++K RLVA+GF Q +GI Y E+ SP + S+R++L+++A E Q+DV A+L D+EEEVY++ PE + S + V L K++ GL A W KF + + F+ + D C+++++ G + YVDD+L+AT K + + L +KD+GEASY +G I +R+ G L Q YI + ERF + S+ P V G K L+ S P+ D E E M IPY VG+LM+A TRP+I+FA L ++ NPG HW+AA+K ++ L T+D + Y
Sbjct: 1819 DPETFSQAMSSKESNLWYNAMRDEMDSMASNQVWDLVELPVGVKAIGCRWVFKTKKDSEGNIERHKARLVAKGFTQREGIDYRETFSPVSKKDSLRVILALVAHFDLELHQMDVKTAFLNGDLEEEVYMKQPEGFLSSVGEHLVCKLNKSIYGLKQASRQWYLKFHEVISSFSFEENVMDHCIYQKV-SGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKGDK-LALSQCPKNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGIDHWKAAKKVMRYLQGTKDYMLMY 2176 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig116576.1300.1 >prot_H-elongata_contig116576.1300.1 ID=prot_H-elongata_contig116576.1300.1|Name=mRNA_H-elongata_contig116576.1300.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp MGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRback to top mRNA from alignment at H-elongata_contig116576:271..1353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig116576.1300.1 ID=mRNA_H-elongata_contig116576.1300.1|Name=mRNA_H-elongata_contig116576.1300.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1083bp|location=Sequence derived from alignment at H-elongata_contig116576:271..1353+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig116576:271..1353+ >mRNA_H-elongata_contig116576.1300.1 ID=mRNA_H-elongata_contig116576.1300.1|Name=mRNA_H-elongata_contig116576.1300.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig116576:271..1353+ (Himanthalia elongata Himel1 dioecious)back to top |