prot_H-elongata_contig116576.1300.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116576.1300.1
Unique Nameprot_H-elongata_contig116576.1300.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 129 bits (325), Expect = 7.120e-32
Identity = 61/155 (39.35%), Postives = 98/155 (63.23%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQVGLLKKAMCGLVHAGLLW 155
            + EAQAS EWP+W++A+  E D     G W++ + PK++  +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++EE+Y+  PE + D   ++  L+K + GL  +G  W
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 128 bits (321), Expect = 2.460e-31
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAG 152
            + EA  S+EWP+WK AIA+EM      G + +VE PK   ++G++ VF+ K + +G IE YK RLVAQGF QV GI ++E+ +P    ASIR++L++ A   WE  Q+DV  AYL  D+EEE+Y+  P    +  K+  V  LK+ + GL  +G
Sbjct:  925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSG 1078          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA)

HSP 1 Score: 118 bits (296), Expect = 5.480e-30
Identity = 58/145 (40.00%), Postives = 92/145 (63.45%), Query Frame = 0
Query:   13 WKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYR--DSRKQVGLLKKAMCGLVHAGLLW 155
            W +A+  EM+       W++V++P++K  +G R +F  K   DG IE+YK RLVA+G+ Q  GI Y E+ +P     ++R+VL++ A  GW+  QLDV  A+L  ++EEEVY+E+P+ ++  + R +V LLKKA+ GL  +   W
Sbjct:    6 WTQAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 122 bits (307), Expect = 1.400e-29
Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQ--VGLLKKAMCGLVHAG 152
            + EA  S+EWP+WK AI +EM      G + +VE PK   ++G++ VF+ K + +  IE YK RLVAQGF QV GI ++E+ +P    ASI ++L++ A   WE  Q+DV  AYL  D+EEE+Y++ P    +  K+  V  LK+ + GL  +G
Sbjct:  115 LNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSG 268          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI)

HSP 1 Score: 122 bits (307), Expect = 1.830e-29
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   13 WKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRK-QVGLLKKAMCGLVHAGLLW 155
            W+ A+A+E++       W+VV+ P EK  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y E  SP     S+R  L+++ A  WE  Q+DV+ A+L  D+EEEVY++LPE ++ + K +V  L+K++ GL  A   W
Sbjct:  565 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 708          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI)

HSP 1 Score: 122 bits (305), Expect = 2.280e-29
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   13 WKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRK-QVGLLKKAMCGLVHAGLLW 155
            W+ A+A+E++       W+VV+ P EK  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y E+ SP     S+R  L++  A  WE  Q+DV+ A+L  D+EEEVY++LPE ++ + K +V  L+K++ GL  A   W
Sbjct:   96 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 239          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 122 bits (306), Expect = 2.570e-29
Identity = 61/153 (39.87%), Postives = 99/153 (64.71%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQVGLLKKAMCGLVHAGLLW 155
            +A +  +  +W++A   E++     GV++ V RP+++ ++G++ VFK K   DG++EKYK RLVAQGF QV+GI Y+E+ +P     SIR++L++ A   WE  Q+DV  A+L  ++EEE+Y+++P  ++ S   V  LKKA+ GL  A   W
Sbjct: 1000 DAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREW 1152          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 121 bits (304), Expect = 4.770e-29
Identity = 64/155 (41.29%), Postives = 99/155 (63.87%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELP--EAYRDSRKQVGLLKKAMCGLVHAGLLW 155
            EA  S +WPQW++AI +EM        + +VE P+   V+G++ VF+ K + +G+IE YK RLVAQGF Q+ GI ++++ +P    ASIR++L++ A   W+  Q+DV  AYL AD+EEE++++ P  +A R     V LL+ A+ GL  +G  W
Sbjct:  965 EAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQW 1119          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY)

HSP 1 Score: 121 bits (303), Expect = 6.320e-29
Identity = 58/152 (38.16%), Postives = 93/152 (61.18%), Query Frame = 0
Query:    4 AQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQVGLLKKAMCGLVHAGLLW 155
            AQAS EW +W++A+  E D     G W++ + PK +  +G + VF+RK +K+ ++ KYK RLVAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++EE+Y+  PE + D   ++  L+K + GL  +G  W
Sbjct:  718 AQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKW 869          
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI)

HSP 1 Score: 121 bits (303), Expect = 6.450e-29
Identity = 61/144 (42.36%), Postives = 92/144 (63.89%), Query Frame = 0
Query:   13 WKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRK-QVGLLKKAMCGLVHAGLLW 155
            W+ A+A+E++       W+VV+ P EK  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y E  SP     S+R  L++  A  WE  Q+DV+ A+L  D+EEEVY++LPE ++ + K +V  L+K++ GL  A   W
Sbjct:  819 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116576.1300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GYH9_9APHY7.120e-3239.35Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401GN13_9APHY2.460e-3143.51Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A151RGT1_CAJCA5.480e-3040.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GP19_9APHY1.400e-2941.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438E4T4_VITVI1.830e-2942.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A438GNV2_VITVI2.280e-2942.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C2WN23_AMAMK2.570e-2939.87Integrase catalytic domain-containing protein (Fra... [more]
A0A401GQU1_9APHY4.770e-2941.29Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A401H727_9APHY6.320e-2938.16Integrase catalytic domain-containing protein n=1 ... [more]
A5BCC7_VITVI6.450e-2942.36Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..155
e-value: 6.8E-32
score: 111.0
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 7..147
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116576contigH-elongata_contig116576:289..756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116576.1300.1mRNA_H-elongata_contig116576.1300.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116576 271..1353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116576.1300.1 ID=prot_H-elongata_contig116576.1300.1|Name=mRNA_H-elongata_contig116576.1300.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASSEWPQWKRAIAREMDGQTVRGVWQVVERPKEKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASIRMVLSMIAA
LGWEARQLDVDMAYLEADVEEEVYVELPEAYRDSRKQVGLLKKAMCGLVH
AGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like