mRNA_H-elongata_contig115542.1228.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A2P6SMQ0_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SMQ0_ROSCH) HSP 1 Score: 237 bits (604), Expect = 3.060e-68 Identity = 131/334 (39.22%), Postives = 202/334 (60.48%), Query Frame = 1
Query: 4 WKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQ--VSLGKKAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTSI--IPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
W +A+ E+D GVW++V+ + +G + VFK K D G IE++K RLV +GF Q +GI++ E+ SP + S R++++++A E Q+DV A+L ++EEEI++ E + ++ K+ V KK++YGL A W KKF +++ GF + D CV+ +++ G + +++YVDD+L+AS+ + K L S F +K+LGEASY LG I RDR G+L Q YI + +RFG+ + +P G K L+K+ P+T+ E EM IPY +VG+LM+A TRPD+SFA L++F NPG HW A +KVL+YL
Sbjct: 263 WTQAMIAELDSMYKNGVWELVKPKENHKPIGCKWVFKTKRDVSGNIERHKARLVAKGFTQKEGIYFTETFSPVSTKDSFRIIMALVAHYDMELHQMDVKTAFLNGELEEEIFMVQPEGFIEAGKENMVCRLKKSIYGLKQASRQWYKKFDSVVSSFGFTENLVDECVYLKVV-GNNFIFLILYVDDILLASSNVKLLKDTKAFLSSNFDMKELGEASYVLGIEIKRDRKQGLLGLSQQNYISKILKRFGMETCANGEVPMSKGDK-LTKNQCPKTENEKTEMESIPYARLVGSLMYAQVCTRPDLSFAVGMLSRFQSNPGHEHWTAGKKVLRYL 594
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH) HSP 1 Score: 231 bits (590), Expect = 3.220e-68 Identity = 127/334 (38.02%), Postives = 197/334 (58.98%), Query Frame = 1
Query: 1 QWKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQ--VSLGKKAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTS-IIPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
+W A+ E+ VW++VE P+G +G + VFK K D +G IE+YK RLV +GF Q +GI Y+E+ SP + S+R++++++A E Q+DV A+L ++EEE+++ E + K+ V KK++YGL A W KF + + GF+ + D C++ ++ G + +++YVDD+L+AS+ + L F +KD+GEASY +G I RDR+ G+L Q YI+ + ERFG+ K S I + G S PQ + E + M +IPY VG+L++A T TRPDISFA L ++ NPG HW+A +KV++YL
Sbjct: 31 KWIDAMNDELKSMDQNKVWELVELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSPSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYL 363
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A438CL20_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CL20_VITVI) HSP 1 Score: 241 bits (614), Expect = 3.760e-68 Identity = 135/334 (40.42%), Postives = 199/334 (59.58%), Query Frame = 1
Query: 4 WKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGK--KAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGV--TKTSIIPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
WK A+ EM+ GVW +VE P G +G + VFK K D G+IE+YK RLVV+G+ Q +GI ++E+ SP + S R++++++A E Q+DV A+L D++EE+Y+E + + K+ + K K++YGL A W KF + GF+ + D C++ R+ G + +V+YVDD+L+AS + L + F +KDLGEASY LG I RDR G+L Q YI+ + +RF + K++ P V G K SK+ PQ D E EEM+ IPY +VG+LM+A TRPDI+F L ++ NPG HW+A +KVL+YL
Sbjct: 788 WKEAMDDEMNSMYMNGVWDLVELPHGCKPVGCKWVFKTKRDSSGKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLELHQMDVKTAFLNGDLDEEVYMEQPIGFVEVGKEDLVCKLNKSIYGLKQASRQWYLKFDKIITQNGFKENTVDRCIYLRV-SGSSYIFLVLYVDDILLASNDPDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIERILKRFNMHNCKSTKAPIVKGDK-FSKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYL 1119
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY) HSP 1 Score: 237 bits (604), Expect = 4.360e-68 Identity = 134/334 (40.12%), Postives = 199/334 (59.58%), Query Frame = 1
Query: 1 QWKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQ--VSLGKKAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTSIIPS-VVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
+W A+ E+ VW +V+ P G +G + VFK K D G+IE+YK RLV +GF Q +G+ Y+E+ SP ++ S R+V++++A E Q+DV A+L D+ E++Y+ + ++ S K+ V KK++YGL A W KF + + GF+ + D C++ +I G ++ +V+YVDD+L+AS ++ R L F +KDLGEAS+ LG I RDR+ GIL Q YI + ERF ++ + + VV G LSK PQ D E EM++IPY VG+LM+A TRPDI+FA L +F +PG HWRA +KVL+YL
Sbjct: 292 KWIDAMVDELKSMDNNNVWDLVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYLKI-SGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYL 624
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR) HSP 1 Score: 227 bits (579), Expect = 1.010e-67 Identity = 123/334 (36.83%), Postives = 195/334 (58.38%), Query Frame = 1
Query: 1 QWKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQ--VSLGKKAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTS-IIPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
+W A+ E++ VW++VE G +G + V+K K+D +G +E++K RLV +G+ Q +GI Y+E+ SP + S+R+V++++A E Q+DV A+L ++ E++Y+ E ++ K+ V KK+ YGL A W KF + GF +Q D C + + + G ++V+YVDD+L+AS + ++ R L S F +KDLGEASY +G I RDR +G L Q YI + R+ + S ++ VV G P+T+ E E+MR IPY +VG++M+A TRPDI++ A L ++ NPG HW+A +KVL+YL
Sbjct: 50 EWHNAMIDELESMDKNNVWELVELLNGAKPVGCKWVYKTKLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYLK-MSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLRYL 382
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A251UJK4_HELAN (Putative zinc finger, CCHC-type n=7 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UJK4_HELAN) HSP 1 Score: 239 bits (610), Expect = 1.350e-67 Identity = 128/335 (38.21%), Postives = 201/335 (60.00%), Query Frame = 1
Query: 1 QWKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQ--VSLGKKAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVT--KTSIIPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
+W +A+ E++ VW +VE P G +G + VFK K+D +G +E+YK RLV +G+ Q +GI Y+E+ SP + S+R+V++++A E Q+DV A+L D++E++Y++ E ++ ++ V KK++YGL A W KF + +GF ++Q D C + + + G ++V+YVDD+L+AS + ++ R L F +KDLG+ASY +G I RDR+ GIL Q YI + R+ + K S+ P VV G P T+ E E+M QIPY +VG+LM+A TRPDI++ A L ++ NPG HW+A +KVL+YL
Sbjct: 809 EWNKAMIDELESMKKNDVWDLVELPNGVKPVGCKWVFKTKLDPNGNVERYKARLVAKGYTQKEGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLDEDVYMKQPEGFKPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKRQGFMKNQVDQCTYLK-MSGSDFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGDASYVIGIEIHRDRHKGILGLSQKAYIDRVLTRYNMQQCKPSVAP-VVKGDVFGSFQCPTTEVEKEQMSQIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYL 1141
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A438E9F8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E9F8_VITVI) HSP 1 Score: 229 bits (584), Expect = 2.420e-67 Identity = 132/334 (39.52%), Postives = 192/334 (57.49%), Query Frame = 1
Query: 4 WKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGK--KAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTSI--IPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
WK A+ EM+ GVW +VE P G +G + VFK K D GRIE+YK RLVV+G+ Q +GI ++E+ SP + S R++LS++A E Q+DV ++L D++E +Y+E + + K+ + K K++YGL A W KF + GF+++ D C++ R+ G + +V+YVDD+L+AS + L + F +KDLGEASY L I RDR G+L Q YI+ + +RF + S +P V K SK+ PQ D E EEMR IPY +VG+LM+A T PDI+F L ++ NP HW+A + VL YL
Sbjct: 32 WKEAMDDEMNSMYMNGVWDLVELPHGCKPVGCKWVFKTKRDSSGRIERYKTRLVVKGYSQREGIDFKETFSPVSIKDSFRVILSIVAHFDLELHQMDVKTSFLNGDLDENVYMEQPTGFTEVGKEHLVCKLNKSIYGLKQASRQWYLKFDRIITQNGFKKNTVDRCIYLRV-SGSSYIFLVLYVDDILLASNDSDLLIETKHMLSTHFDMKDLGEASYVLSIKIFRDRANGVLKLSQRTYIKKILKRFNMHNCSSTKVPIVKDDK-FSKAQCPQNDDEREEMRTIPYLSLVGSLMYAQVCTHPDIAFVVGMLGRYLSNPRIEHWKAAKNVLMYL 363
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A2N9EM55_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EM55_FAGSY) HSP 1 Score: 238 bits (608), Expect = 2.610e-67 Identity = 131/333 (39.34%), Postives = 197/333 (59.16%), Query Frame = 1
Query: 4 WKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAY--RDSRKQVSLGKKAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTS-IIPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
W A+ EM+ + GVW +VE P G +G + VFK K D G IE+YK RLV +GF Q +GI Y E+ SP + S+R++L+++A E +Q+DV A+L D+EEE+Y++ E + D + V KK++YGL A W KF +++ GF + D C+++++ G + +V+YVDD+L+A+ K + + L F +KD+GEASY +G I RDR GIL Q YI + ERF + S + +V G + + P+ D E E+M+ IPY VG+LM+A TRPDI+FA L ++ +PG HWRA +KV++YL
Sbjct: 701 WYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRVILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFLSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKVLERFRMNDCSPSVAPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYL 1032
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A2N9HDZ1_FAGSY (RNase H type-1 domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HDZ1_FAGSY) HSP 1 Score: 239 bits (609), Expect = 2.700e-67 Identity = 136/334 (40.72%), Postives = 199/334 (59.58%), Query Frame = 1
Query: 1 QWKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQ--VSLGKKAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTSIIPS-VVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
+W A+ E+ VW +V+ P G +G + VFK K D G+IE+YK RLV +GF Q +GI Y+E+ SP ++ S R+V++++A +E Q+DV A+L D+ E++Y+ ++ S K+ V KK++YGL A W KF + + GF+ + D C++ +I G ++ +V+YVDD+L+AS ++ R L F +KDLGEAS+ LG I RDR+ GIL Q YI + ERF ++ S + VV G LSK PQ D E EM++IPY VG+LM+A TRPDI+FA L +F +PG HWRA +KVL+YL
Sbjct: 494 KWIDAMVDELKSMDNNNVWDLVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGIDYKETFSPVSSKDSFRIVMALVAHFDFELHQMDVKTAFLNGDLTEDVYMLQPNGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYLKI-SGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCSAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYL 826
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A2K3LA50_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LA50_TRIPR) HSP 1 Score: 235 bits (600), Expect = 3.260e-67 Identity = 127/333 (38.14%), Postives = 193/333 (57.96%), Query Frame = 1
Query: 4 WKRAIAREMDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGK--KAMYGLVHAGLLW*KKFGIELAAKGFQRSQADPCVFRRILHGVVVVVIVVYVDDLLVASATKRDEKQAVRDLCSCFPIKDLGEASYYLGCHITRDRNTGILTFDQHQYIQTMAERFGVTKTS-IIPSVVGGKALSKSDSPQTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAVQKVLQYL 993
W A+ EM+ ++ VW +V P G +G + VFK K D G IE+YK RLV +GF Q +GI Y E+ SP + S R++++++A +E Q+DV A+L +EEE+Y++ E + S + + K +++YGL A W KF + + GF+ + D C+++++ G + +V+YVDD+L+A+ K + + L F +KD+GEASY +G I RDRN GIL Q YI + ERF + S + +V G S PQ D E E M+ IPY VG+LM+A TRPDI++A L ++ NPG HW+A +KV++YL
Sbjct: 448 WHDAMKEEMNSMVSNKVWDLVTLPNGVKAIGCKWVFKTKRDSQGNIERYKARLVAKGFTQREGIDYTETFSPVSKKDSFRVIMALVAHFNFELHQMDVKTAFLNGSLEEEVYMKQPEGFYSSEGENLVCKLNRSIYGLKQASRQWYLKFHEVITSFGFEENVMDQCIYQKV-SGSHICFLVLYVDDILLATNDKGMLYEVKQFLSRNFDMKDMGEASYVIGIKIHRDRNRGILGLSQEAYINKVLERFNMKNCSPSVAPIVKGDRFELSQCPQNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAYAVGVLGRYQSNPGVDHWKAAKKVMRYL 779 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115542.1228.1 >prot_H-elongata_contig115542.1228.1 ID=prot_H-elongata_contig115542.1228.1|Name=mRNA_H-elongata_contig115542.1228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp MDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFback to top mRNA from alignment at H-elongata_contig115542:1087..2079+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115542.1228.1 ID=mRNA_H-elongata_contig115542.1228.1|Name=mRNA_H-elongata_contig115542.1228.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=993bp|location=Sequence derived from alignment at H-elongata_contig115542:1087..2079+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115542:1087..2079+ >mRNA_H-elongata_contig115542.1228.1 ID=mRNA_H-elongata_contig115542.1228.1|Name=mRNA_H-elongata_contig115542.1228.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig115542:1087..2079+ (Himanthalia elongata Himel1 dioecious)back to top |