prot_H-akashiwo_Contig941.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig941.5.1
Unique Nameprot_H-akashiwo_Contig941.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length34
Homology
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 2.200e-10
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNK 32
            LDISTAFLN DIDGDVYV+QPPGFVD +HP+K
Sbjct:  224 LDISTAFLNSDIDGDVYVKQPPGFVDKDHPHK 255          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 2.210e-10
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNK 32
            LDISTAFLN DIDGDVYV+QPPGFVD +HP+K
Sbjct:  295 LDISTAFLNSDIDGDVYVKQPPGFVDKDHPHK 326          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 7.380e-9
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNK 32
            LDISTAFLNG +  DVYVRQPP +VDP+HPNK
Sbjct:   36 LDISTAFLNGAMTDDVYVRQPPSYVDPQHPNK 67          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A803QDY6_CANSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QDY6_CANSA)

HSP 1 Score: 56.2 bits (134), Expect = 3.290e-8
Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNK 32
            LD++ AFLNGD+  ++Y+ QPPGFVDPEHPNK
Sbjct:  128 LDVNNAFLNGDLQEEIYMVQPPGFVDPEHPNK 159          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: Q7XZY2_ORYSJ (Putative gag/pol polyprotein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XZY2_ORYSJ)

HSP 1 Score: 54.3 bits (129), Expect = 1.570e-7
Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNK 32
            +D+ +AFLNGD++ DVYV QPPGFVD EHP+K
Sbjct:  378 MDVKSAFLNGDLEEDVYVVQPPGFVDEEHPDK 409          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A2I0V9Y1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0V9Y1_9ASPA)

HSP 1 Score: 54.3 bits (129), Expect = 1.580e-7
Identity = 21/30 (70.00%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHP 30
            LD+S AFL+GD+  DVY+RQPPGF+DP+HP
Sbjct:   21 LDVSNAFLHGDLPDDVYMRQPPGFIDPKHP 50          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A699NIQ8_TANCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699NIQ8_TANCI)

HSP 1 Score: 52.8 bits (125), Expect = 2.230e-7
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNKF 33
            +D+ TAFLNG +  +VYV QP GFVDP+HP KF
Sbjct:  106 MDVKTAFLNGPLKDEVYVAQPDGFVDPDHPKKF 138          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A699R5A0_TANCI (Gag-Pol polyprotein (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699R5A0_TANCI)

HSP 1 Score: 50.4 bits (119), Expect = 2.350e-7
Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNK 32
            +D+ TAFLNG ++ +VYV QP GFVDP+HP K
Sbjct:    1 MDVKTAFLNGPLNEEVYVAQPDGFVDPDHPEK 32          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A7H4LHK8_WHEAT (Genome assembly, chromosome: II n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A7H4LHK8_WHEAT)

HSP 1 Score: 52.8 bits (125), Expect = 3.830e-7
Identity = 20/33 (60.61%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNKF 33
            +D+ +AFLNG ++ +VYV QPPGF DP+HP+KF
Sbjct:    1 MDVKSAFLNGKLEEEVYVAQPPGFEDPKHPDKF 33          
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Match: A0A6L2JNN6_TANCI (Uncharacterized protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JNN6_TANCI)

HSP 1 Score: 53.1 bits (126), Expect = 3.960e-7
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    1 LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNK 32
            +D+ +AFL G IDG+VYV QPPGFVDP+ PNK
Sbjct: 4135 MDVKSAFLYGTIDGEVYVSQPPGFVDPKFPNK 4166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig941.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y3B6_HETAK2.200e-1084.38Hypothetical protein (Fragment) n=6 Tax=Heterosigm... [more]
A0A7S3Y3C5_HETAK2.210e-1084.38Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y6S2_HETAK7.380e-978.13Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A803QDY6_CANSA3.290e-868.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q7XZY2_ORYSJ1.570e-768.75Putative gag/pol polyprotein n=2 Tax=Oryza sativa ... [more]
A0A2I0V9Y1_9ASPA1.580e-770.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A699NIQ8_TANCI2.230e-763.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A699R5A0_TANCI2.350e-762.50Gag-Pol polyprotein (Fragment) n=1 Tax=Tanacetum c... [more]
A0A7H4LHK8_WHEAT3.830e-760.61Genome assembly, chromosome: II n=1 Tax=Triticum a... [more]
A0A6L2JNN6_TANCI3.960e-768.75Uncharacterized protein n=1 Tax=Tanacetum cinerari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..32
e-value: 9.1E-8
score: 32.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig941contigH-akashiwo_Contig941:149288..149389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig941.5.1mRNA_H-akashiwo_Contig941.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig941 149288..149515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig941.5.1 ID=prot_H-akashiwo_Contig941.5.1|Name=mRNA_H-akashiwo_Contig941.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=34bp
LDISTAFLNGDIDGDVYVRQPPGFVDPEHPNKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2