Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 258 |
| Cds size | 255 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929027.8821476-CDS-H-fluviatilis_contig100984:21..168 | 1622929027.8821476-CDS-H-fluviatilis_contig100984:21..168 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100984 22..168 + |
| 1691135155.4364123-CDS-H-fluviatilis_contig100984:21..168 | 1691135155.4364123-CDS-H-fluviatilis_contig100984:21..168 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100984 22..168 + |
| 1622929027.8939195-CDS-H-fluviatilis_contig100984:236..344 | 1622929027.8939195-CDS-H-fluviatilis_contig100984:236..344 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100984 237..344 + |
| 1691135155.4474127-CDS-H-fluviatilis_contig100984:236..344 | 1691135155.4474127-CDS-H-fluviatilis_contig100984:236..344 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100984 237..344 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100984.267.1 >prot_H-fluviatilis_contig100984.267.1 ID=prot_H-fluviatilis_contig100984.267.1|Name=mRNA_H-fluviatilis_contig100984.267.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=85bp
CAHSVKESATPAAAVTAEQFLEASETGDLATLLRGLAQYPPVDINAVDKA
GCTALHTAVWRKDARMVSLLLAQPPPNAIRVDARH back to topmRNA from alignment at H-fluviatilis_contig100984:22..346+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig100984.267.1 ID=mRNA_H-fluviatilis_contig100984.267.1|Name=mRNA_H-fluviatilis_contig100984.267.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=325bp|location=Sequence derived from alignment at H-fluviatilis_contig100984:22..346+ (Heribaudiella fluviatilis SAG_13_90)
TGCGCACATAGTGTCAAAGAGAGCGCAACGCCAGCAGCTGCGGTGACGGC
GGAGCAATTTTTAGAAGCATCCGAGACAGGCGATTTGGCGACGCTGCTGC
GCGGGTTAGCACAATACCCACCTGTCGACATCAACGCTGTTGATAAGGTG
AATCTTTGGTGTTGCTGGTGTTTCTGTTTGCCGTGCGCGTGACGTGAGTG
GTTCGTCGTTGGCAGGCTGGCTGCACGGCGTTGCACACGGCAGTGTGGAG
AAAGGACGCGCGGATGGTTTCACTATTGCTGGCACAGCCACCGCCCAACG
CGATTCGTGTCGATGCACGCCACAG back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig100984:22..346+ >mRNA_H-fluviatilis_contig100984.267.1 ID=mRNA_H-fluviatilis_contig100984.267.1|Name=mRNA_H-fluviatilis_contig100984.267.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=510bp|location=Sequence derived from alignment at H-fluviatilis_contig100984:22..346+ (Heribaudiella fluviatilis SAG_13_90)
TGCGCACATAGTGTCAAAGAGAGCGCAACGCCAGCAGCTGCGGTGACGGC
GGAGCAATTTTTAGAAGCATCCGAGACAGGCGATTTGGCGACGCTGCTGC
GCGGGTTAGCACAATACCCACCTGTCGACATCAACGCTGTTGATAAGTGC
GCACATAGTGTCAAAGAGAGCGCAACGCCAGCAGCTGCGGTGACGGCGGA
GCAATTTTTAGAAGCATCCGAGACAGGCGATTTGGCGACGCTGCTGCGCG
GGTTAGCACAATACCCACCTGTCGACATCAACGCTGTTGATAAGGCTGGC
TGCACGGCGTTGCACACGGCAGTGTGGAGAAAGGACGCGCGGATGGTTTC
ACTATTGCTGGCACAGCCACCGCCCAACGCGATTCGTGTCGATGCACGCC
ACGCTGGCTGCACGGCGTTGCACACGGCAGTGTGGAGAAAGGACGCGCGG
ATGGTTTCACTATTGCTGGCACAGCCACCGCCCAACGCGATTCGTGTCGA
TGCACGCCAC back to top
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