Homology
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI)
HSP 1 Score: 87.4 bits (215), Expect = 4.670e-20
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VVKKLTMKKAYEVTMETHK+GKATVTQAWKSK+E YCL+LQQCGLT
Sbjct: 135 VVKKLTMKKAYEVTMETHKSGKATVTQAWKSKSESYCLQLQQCGLT 180
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA)
HSP 1 Score: 82.8 bits (203), Expect = 3.110e-19
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VVKKLTMK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLT
Sbjct: 54 VVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLT 99
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA)
HSP 1 Score: 82.8 bits (203), Expect = 5.690e-19
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VVKKLTMK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLT
Sbjct: 101 VVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLT 146
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A7S2EBD0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBD0_TRICV)
HSP 1 Score: 58.2 bits (139), Expect = 6.850e-9
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VV L K+A+++ METH GKATVT+AW+ KAE YCL LQ+ GLT
Sbjct: 167 VVSTLDRKRAFDICMETHGIGKATVTKAWRQKAEQYCLNLQRQGLT 212
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A6U6HVZ7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6HVZ7_9STRA)
HSP 1 Score: 55.8 bits (133), Expect = 1.260e-8
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VV L K+A+++ METH GKAT+T+ W+ KAE YCL LQ+ GLT
Sbjct: 68 VVTTLDRKRAFDICMETHGIGKATITKVWRQKAEQYCLNLQRQGLT 113
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A7R9Z3E7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z3E7_9STRA)
HSP 1 Score: 56.2 bits (134), Expect = 1.370e-8
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VV L K+A+++ METH GKAT+T+ W+ KAE YCL LQ+ GLT
Sbjct: 86 VVSTLDRKRAFDICMETHGIGKATITKTWRQKAEQYCLNLQRQGLT 131
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A6U6I937_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6I937_9STRA)
HSP 1 Score: 55.8 bits (133), Expect = 3.070e-8
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VV L K+A+++ METH GKAT+T+ W+ KAE YCL LQ+ GLT
Sbjct: 122 VVTTLDRKRAFDICMETHGIGKATITKVWRQKAEQYCLNLQRQGLT 167
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A7R9ULH9_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULH9_DIALT)
HSP 1 Score: 54.3 bits (129), Expect = 9.110e-8
Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
VVK ++ KKAY++T+E H +G ATVT WK +A+ YC+ LQ+ GLT
Sbjct: 109 VVKTVSRKKAYKITIECHMSGIATVTTTWKQQAKSYCMGLQKMGLT 154
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A8J9TNB5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TNB5_PHATR)
HSP 1 Score: 49.3 bits (116), Expect = 1.870e-6
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 1 VVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
V+ L K A+E+ ++TH GKAT+T+ WK +AE +CL LQ+ GLT
Sbjct: 36 VIGTLDRKAAFEICVQTHGIGKATITKTWKKQAEQHCLGLQRQGLT 81
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Match:
A0A1E7FBP7_9STRA (ClpS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBP7_9STRA)
HSP 1 Score: 49.7 bits (117), Expect = 4.680e-6
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 13 LTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT 138
L K ++E+ +ETH GKATVT+ WK +AE +CL LQ+ GLT
Sbjct: 97 LDRKASFEICVETHGVGKATVTKTWKKQAEQFCLGLQRQGLT 138
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100029.68.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 13
0 1 Expect = 4.67e-20 / Id = 91.30 Expect = 3.11e-19 / Id = 89.13 Expect = 5.69e-19 / Id = 89.13 Expect = 6.85e-9 / Id = 60.87 Expect = 1.26e-8 / Id = 56.52 Expect = 1.37e-8 / Id = 56.52 Expect = 3.07e-8 / Id = 56.52 Expect = 9.11e-8 / Id = 54.35 Expect = 1.87e-6 / Id = 50.00 Expect = 4.68e-6 / Id = 54.76 Sequence D8LIY1_ECTSI A0A835ZHY3_9STRA A0A835ZBL6_9STRA A0A7S2EBD0_TRICV A0A6U6HVZ7_9STRA A0A7R9Z3E7_9STRA A0A6U6I937_9STRA A0A7R9ULH9_DIALT A0A8J9TNB5_PHATR A0A1E7FBP7_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100029.68.1
>prot_H-fluviatilis_contig100029.68.1 ID=prot_H-fluviatilis_contig100029.68.1|Name=mRNA_H-fluviatilis_contig100029.68.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=40bp
MKKAYEVTMETHKAGKATVTQAWKSKAEGYCLKLQQCGLT back to top mRNA from alignment at H-fluviatilis_contig100029:136..862+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig100029.68.1 ID=mRNA_H-fluviatilis_contig100029.68.1|Name=mRNA_H-fluviatilis_contig100029.68.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=727bp|location=Sequence derived from alignment at H-fluviatilis_contig100029:136..862+ (Heribaudiella fluviatilis SAG_13_90)GTGGTAAAGAAGCTGACC ATGAAGAAGGCGTACGAGGTAACTATGGAAAC
ACACAAAGCGGGGAAGGCTACCGTAACACAAGCGTGGAAAAGCAAG GTGA
TAGCTTACTCTGTTCATCTGCTCGAGCAGTGTTTCCTCGGCATTTTGCAC
GCGTTTGATGAGTGTCGTCGAATGTTGTGTCTTCAGCAAGCTTCCGCCGA
TCTTCGAAGCATCTATTTCGCGAGCTAGCGCCGATAGAGTTAGCCTCACC
GCTACAATGGAGCATGGGCTCAAATATGGTGAACTTGCACCAGCATGAAT
TTTATTCACTCGCCCATGTTGGGCGTTCAAGAGCGAAGCCACGAACACGT
TGTTTCGAACGGATCATCATGACTTCGTACAGTAACATGTGCAAGAACAG
ACCGAACAGGAAGCACTAAGGATCCCAGTGTAGCTGGTCGAGCGCCGTCA
TTCTCACCGTCCAATGTGTACCCTTGTGCAAAATGACAACATCAGGGGGC
AGCTTCCCACACACTGCAACACACCCCGTTGGAGCTGACGTTTAACATGA
AGTACGCTTACGCGCAGCGAGGTACAGCACTTTTGTGTTGTGTTGAGATC
AAGTTGGTAATCCGAGCGAAAGCGAAAATCGCTGCGTTTCTGACGTGTGT
TCTCTATGCCCACCCGAAACGAAAACGCAAAACAGGCGGAGGGATACTGC
CTAAAATTGCAACAGTGTGGTCTAACC back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100029:136..862+
>mRNA_H-fluviatilis_contig100029.68.1 ID=mRNA_H-fluviatilis_contig100029.68.1|Name=mRNA_H-fluviatilis_contig100029.68.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=240bp|location=Sequence derived from alignment at H-fluviatilis_contig100029:136..862+ (Heribaudiella fluviatilis SAG_13_90) back to top