mRNA_H-paniculata_contig172.4011.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig172.4011.1
Unique NamemRNA_H-paniculata_contig172.4011.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.360e-23
Identity = 69/206 (33.50%), Postives = 111/206 (53.88%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV     +C +  MV+WKA   +       +W   T E G              Y    T     + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT+V  + QHAD LTKA+ +   SF  HR  +MN+
Sbjct:  172 DIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISK--ESFALHRDFVMNL 375          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 6.360e-23
Identity = 69/206 (33.50%), Postives = 109/206 (52.91%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV     +C +  MV+WKA   +       +W   T E G              Y    T     + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT V    QHAD LTKA+ +   SF  HR  +MN+
Sbjct:  117 DIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISK--ESFALHRDFVMNL 320          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 6.060e-22
Identity = 68/206 (33.01%), Postives = 109/206 (52.91%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV     +C +  MV+WKA   +       +W   T E G              Y    T     + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT+V    QHAD LTKA+ +   S   HR  +MN+
Sbjct:  234 DIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISK--ESLGLHRDFVMNL 437          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 7.190e-22
Identity = 69/206 (33.50%), Postives = 110/206 (53.40%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV     +C +  MV+WKA   +       +W   T E G              Y          + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT+V  E QHAD LTKA+ +   SF  HR  +MN+
Sbjct: 1268 DIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISK--ESFALHRDFVMNL 1471          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.670e-21
Identity = 69/206 (33.50%), Postives = 109/206 (52.91%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV     +C +  MV+WKA   +       +W   T E G              Y    T     + G+ + GGG  +  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + ++N G I++ +N  +   ++HIDV HH I + V+   + IT+V  E QHAD LTKA+ +   SF  HR  +MN+
Sbjct: 1227 DIANAVRAVARYCASPKMVHWKAAVGILGYVRRTSWMGITFERGVVTGMGMQVFVDADYASKATDRRSVSGGLVMCGGGCATWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFENNQGAIQIAHNPTTKSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISK--ESFALHRDLVMNL 1430          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5KBS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS9_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.370e-21
Identity = 74/223 (33.18%), Postives = 116/223 (52.02%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPR--AWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNVV*KNINVRKNTISGV 956
            DI++AV     +C +  MV+WKA   L   G  R  +W   T E G              Y          + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++K +LFLRQ   F++P      I + +DN G I++  N  ++  ++HIDV HH I + V    + IT+V  E QHAD LTKA+ +   SF  HR  +MN+  + +  R +T  G+
Sbjct:   61 DIANAVRAVARYCASPQMVHWKAA--LGILGYVRWTSWMGITFERGVVTGMSLQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKGVLFLRQGWRFMLPDAGMPCIPVFEDNQGAIQIAQNPITNSNSKHIDVRHHFIRELVMRKEISITHVTSEFQHADFLTKAISK--ESFALHRYFVMNLHRRTVQYRTDTQRGL 279          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 3.450e-21
Identity = 68/206 (33.01%), Postives = 108/206 (52.43%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKA-VKILHTCGGPRAWGLPTAETGTAG-SRCGYTQPRTALHVR-----TPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV     +C +  +V+W A + IL        +G+        G S  GY     A         + G+   GGG +S  SRTQ+   + T+EA Y+AL E+VK +LFLRQ   F++P +    I + +DN G I++  N  S+  ++HIDV HH + + V+   + + +V    Q AD LTK+L +   +F+ HR  +MN+
Sbjct:   12 DIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSK--DAFESHRDFVMNL 215          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5KQN5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN5_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 8.780e-21
Identity = 68/206 (33.01%), Postives = 108/206 (52.43%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI+ AV     +C +  MV+WKA   +       +W   T E G              Y          + G+ + GGG ++  SRTQ+   + T+E+ Y+A+++++KE+LFLRQ   F++P      I + +DN G I++  N  ++  ++HIDV HH I + V+   + IT+V  E QHAD LTKA+ +   SF  HR  +MN+
Sbjct:  624 DIAKAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLYTTESEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAYNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISK--ESFALHRDFVMNM 827          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JGZ8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ8_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.290e-20
Identity = 66/206 (32.04%), Postives = 107/206 (51.94%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKAVKILHTCGGPRAWGLPTAETGTAGS-------RCGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV     +C +  MV+WKA   +       +W   T E G              Y    T     + G+ + GGG ++  SRTQ+   + T+EA YMA+++++KE+LFLRQ     +P      I + +D  G I++ +N  ++  ++HIDV HH+I + V+   +  T+V  + QHAD L KA+ +   SF  HR  +MN+
Sbjct:  214 DIANAVRAVARYCASPKMVHWKATLGVLGYVWTTSWMGITFERGVVTRMRMQVFVNADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYMAIADVLKEVLFLRQVWRCTLPDAGMPCIPVFEDTHGAIQIAHNPITNSNSKHIDVRHHLIRELVERKEISFTHVPTQFQHADFLAKAISK--DSFALHRDFVMNL 417          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5L8D6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D6_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.450e-20
Identity = 69/206 (33.50%), Postives = 110/206 (53.40%), Query Frame = 3
Query:  321 DISSAVCTAVIFCENLGMVYWKA-VKILHTCGGPRAWGLPTAETGTAG-SRCGYTQPRTALHVR-----TPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 911
            DI++AV T   +C +  +V W A + IL        +G+        G S  GY     A         + G+   GGG +S  SRTQ+   + T+EA Y+AL ++VKE+LFLRQ   F++P +    I I +DN G I++  N  S+  ++H+DV HH++ + V+   + + +V    Q AD LTK+L +   +F+ HR  +MN+
Sbjct:  225 DIANAVRTVARYCASPKLVPWNAAMDILGYARRTSQFGISFQRGTVEGLSLQGYADADFATKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQFWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHVDVRHHLVRELVERKEISVIHVPRRYQRADFLTKSLPK--DAFESHREFVMNL 428          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4G9_9PHAE1.360e-2333.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE6.360e-2333.50Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE6.060e-2233.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JHY5_9PHAE7.190e-2233.50Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JCK7_9PHAE1.670e-2133.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBS9_9PHAE2.370e-2133.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEZ8_9PHAE3.450e-2133.01Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQN5_9PHAE8.780e-2133.01Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JGZ8_9PHAE1.290e-2032.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L8D6_9PHAE1.450e-2033.50Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig172contigH-paniculata_contig172:12974..14683 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.0
Seed ortholog evalue3.1e-13
Seed eggNOG ortholog164328.Phyra85518
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1698
Cds size546
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig172.4011.1prot_H-paniculata_contig172.4011.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig172 13345..13890 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929357.0858011-UTR-H-paniculata_contig172:12973..133441622929357.0858011-UTR-H-paniculata_contig172:12973..13344Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig172 12974..13344 +
1691480828.65821-UTR-H-paniculata_contig172:12973..133441691480828.65821-UTR-H-paniculata_contig172:12973..13344Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig172 12974..13344 +
1622929357.1224205-UTR-H-paniculata_contig172:13890..143601622929357.1224205-UTR-H-paniculata_contig172:13890..14360Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig172 13891..14360 +
1691480828.6788075-UTR-H-paniculata_contig172:13890..143601691480828.6788075-UTR-H-paniculata_contig172:13890..14360Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig172 13891..14360 +
1622929357.1404688-UTR-H-paniculata_contig172:14372..146831622929357.1404688-UTR-H-paniculata_contig172:14372..14683Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig172 14373..14683 +
1691480828.687885-UTR-H-paniculata_contig172:14372..146831691480828.687885-UTR-H-paniculata_contig172:14372..14683Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig172 14373..14683 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929357.1050248-CDS-H-paniculata_contig172:13344..138901622929357.1050248-CDS-H-paniculata_contig172:13344..13890Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig172 13345..13890 +
1691480828.6694002-CDS-H-paniculata_contig172:13344..138901691480828.6694002-CDS-H-paniculata_contig172:13344..13890Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig172 13345..13890 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig172.4011.1

>prot_H-paniculata_contig172.4011.1 ID=prot_H-paniculata_contig172.4011.1|Name=mRNA_H-paniculata_contig172.4011.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp
MVYWKAVKILHTCGGPRAWGLPTAETGTAGSRCGYTQPRTALHVRTPGVR
LLGGGVISSRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKS
YLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVK
IEGQHADVLTKALEQALSSFKKHRSALMNVV*
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mRNA from alignment at H-paniculata_contig172:12974..14683+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig172.4011.1 ID=mRNA_H-paniculata_contig172.4011.1|Name=mRNA_H-paniculata_contig172.4011.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1710bp|location=Sequence derived from alignment at H-paniculata_contig172:12974..14683+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGGAGGTAATGGAGGTATTCGTGGGGGACCTGCGCACGAAGTACAAGA TCAAGGATCTTGGGGAGGCGTCCTATTACGTCGGCTGCCACATTACCCGT AACTGAGAGGAAAAGTTGAAGTTCGACCAGCACCTCTACGCGCAGACGAT CACGGACCGCTTCGAGATCAACAAGACTACCATGGTCCCGGCGACGGCAG CCGTGAAACCACTGTCGAAGGAGGACGGGCCGCAGACCGCGGAGGAGAGG GAGGAAATGCACGGAATCCCGTACCGCGAGGCAGTGGAGCGCTCATGTGG GCATCGACCATGACGCAGCCGACATCTCGAGTGCTGTCTGCACGGCGGTC ATATTCTGCGAGAACCTCGGCATGGTGTACTGGAAGGCTGTGAAGATCCT ACATACGTGCGGAGGACCCAGGGCATGGGGATTACCCACGGCGGAGACGG GAACGGCGGGATCGAGATGTGGGTATACGCAGCCTCGGACCGCGCTACAT GTCCGGACACCAGGCGTTCGACTTCTGGGCGGGGGCGTGATCAGCTCGCG GACCCAGGAGACTACCGCGGTAGATACTTCGGAGGCGATGTACATGGCAC TTTCGGAGATTGTTAAGGAGTTACTTTTTCTCCGCCAGGCGCAGGCGTTC ATCATGCCCACTCTAAAGAGCTACCTCATCGACATCATGCAGGACAACCC CGGGACCATCAAGATGACCAACAACAAGCACTCCAGCAAGAGAACAAGGC ACATCGACGTGAACCACCACATTATACACGATGCCGTGGACGCAGGAAGG GTACTCATAACGTATGTGAAGATTGAGGGCCAGCACGCTGATGTGCTCAC CAAAGCTTTGGAGCAAGCTTTAAGCTCGTTTAAAAAGCACAGGAGTGCTC TGATGAATGTTGTGTGAAAGAACATTAACGTACGAAAAAATACTATATCA GGGGTATCCCTACAAAAATGGGGGAGGACGAGTATTTAGTCTGCATGATA TTGGGGAGACTAATGAAGTATTTCGAAAAGGGGAGGAAAATTGTGAGGAG ATAAGTGATTATATTTTACTCTTGATAGAAACCATGAAAGTCGTGCTCTG CAGGGCAAATGGGGTGTTCGTGATTGATGCGCTACAGATGACCCGTTGGA CCAATAAACGTGATACACGTACAGACTTGTATTGTTCTGACGGGACAAGG GATAACGCGATATGCGGCGTAACCTAGTAGGATCTTTATTTGACAGGAAT TACGACGAGGGACTCTTTTCGTATTACGATTGTTCTAGGCGTCTACCAGC GGAGGAGGGTAAACACCACCAGCTCACTTTCAAATCAGGCCAAGTACAAG TACTCTTCTTTGCGTAATTGTAGCATGGCGAGAGACAGTGTACAGCGAGA TAATAAACGACAAACAATAGAATCCAACTACTTGTTTCTGAGATACGCCT GTGACTTGTGAGTCACAGGGGGAAGCTGTATCAGCGTTCATCGGAGGTTA TCGAACAGGCGCATAAAATAACAGTATATTGGTGAGATTCATATAAGCGT AAGATGCGCCTGGAGAAGGCAAGGTAGCTATTTAGAGAGATAGATGAACA TGTGCATGAACAATATGTCTGAGGTGTTTATGTCCAGGTTGAATATGTGC AAGAGCAAGATGTGATATGTATGGCGTACACAACTGTTTCGCTTTCGCGG GGTGCAGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig172:12974..14683+

>mRNA_H-paniculata_contig172.4011.1 ID=mRNA_H-paniculata_contig172.4011.1|Name=mRNA_H-paniculata_contig172.4011.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1092bp|location=Sequence derived from alignment at H-paniculata_contig172:12974..14683+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGTACTGGAAGGCTGTGAAGATCCTACATACGTGCGGAGGACCCAG
GGCATGGGGATTACCCACGGCGGAGACGGGAACGGCGGGATCGAGATGTG
GGTATACGCAGCCTCGGACCGCGCTACATGTCCGGACACCAGGCGTTCGA
CTTCTGGGCGGGGGCGTGATCAGCTCGCGGACCCAGGAGACTACCGCGGT
AGATACTTCGGAGGCGATGTACATGGCACTTTCGGAGATTGTTAAGGAGT
TACTTTTTCTCCGCCAGGCGCAGGCGTTCATCATGCCCACTCTAAAGAGC
TACCTCATCGACATCATGCAGGACAACCCCGGGACCATCAAGATGACCAA
CAACAAGCACTCCAGCAAGAGAACAAGGCACATCGACGTGAACCACCACA
TTATACACGATGCCGTGGACGCAGGAAGGGTACTCATAACGTATGTGAAG
ATTGAGGGCCAGCACGCTGATGTGCTCACCAAAGCTTTGGAGCAAGCTTT
AAGCTCGTTTAAAAAGCACAGGAGTGCTCTGATGAATGTTGTGTGAATGG
TGTACTGGAAGGCTGTGAAGATCCTACATACGTGCGGAGGACCCAGGGCA
TGGGGATTACCCACGGCGGAGACGGGAACGGCGGGATCGAGATGTGGGTA
TACGCAGCCTCGGACCGCGCTACATGTCCGGACACCAGGCGTTCGACTTC
TGGGCGGGGGCGTGATCAGCTCGCGGACCCAGGAGACTACCGCGGTAGAT
ACTTCGGAGGCGATGTACATGGCACTTTCGGAGATTGTTAAGGAGTTACT
TTTTCTCCGCCAGGCGCAGGCGTTCATCATGCCCACTCTAAAGAGCTACC
TCATCGACATCATGCAGGACAACCCCGGGACCATCAAGATGACCAACAAC
AAGCACTCCAGCAAGAGAACAAGGCACATCGACGTGAACCACCACATTAT
ACACGATGCCGTGGACGCAGGAAGGGTACTCATAACGTATGTGAAGATTG
AGGGCCAGCACGCTGATGTGCTCACCAAAGCTTTGGAGCAAGCTTTAAGC
TCGTTTAAAAAGCACAGGAGTGCTCTGATGAATGTTGTGTGA
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