prot_H-paniculata_contig172.4011.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig172.4011.1
Unique Nameprot_H-paniculata_contig172.4011.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length182
Homology
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.830e-23
Identity = 64/189 (33.86%), Postives = 102/189 (53.97%), Query Frame = 0
Query:    1 MVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            MV+WKA   +       +W   T E G              Y    T     + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT+V  + QHAD LTKA+ +   SF  HR  +MN+
Sbjct:  189 MVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISK--ESFALHRDFVMNL 375          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.760e-22
Identity = 52/136 (38.24%), Postives = 86/136 (63.24%), Query Frame = 0
Query:   48 GVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNVV 181
            G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN   I++ +N  ++  ++HIDV HH I + V+   + IT+V  E QH D LTKA+ +   SF  HR  +MN++
Sbjct:   36 GLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISK--ESFALHRDFVMNLL 169          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.880e-22
Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 0
Query:    1 MVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            MV+WKA   +       +W   T E G              Y    T     + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT V    QHAD LTKA+ +   SF  HR  +MN+
Sbjct:  134 MVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISK--ESFALHRDFVMNL 320          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.450e-22
Identity = 52/135 (38.52%), Postives = 83/135 (61.48%), Query Frame = 0
Query:   48 GVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            G+   GGG +S  SRTQ+   + T+EA Y+AL ++VKE+LFLRQ   F++P +    I + +DN G I++  N  S+  ++HIDV HH + + V+   + + +V    Q AD LTK+L +   +F+ HR  +MN+
Sbjct:   78 GIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPK--DAFESHRDFVMNL 210          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 2.490e-22
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 0
Query:   48 GVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            G+   GGG +S  SRTQ+   + T+EA Y+AL ++VKE++FLRQ   F++P +    I I +DN G I++  N  S+  ++HIDV HH + + V+   + + +V    Q AD LTK+L +   SF+ HR  +MN+
Sbjct:   94 GIVTCGGGSVSWFSRTQKCVTLSTTEAEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSK--DSFESHREFVMNL 226          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.280e-22
Identity = 54/135 (40.00%), Postives = 87/135 (64.44%), Query Frame = 0
Query:   48 GVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT+V  E QHAD LTKA+ +   SF  HR  +MN+
Sbjct: 1339 GLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISK--ESFALHRDFVMNL 1471          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JWJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ4_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 4.540e-22
Identity = 52/135 (38.52%), Postives = 83/135 (61.48%), Query Frame = 0
Query:   48 GVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            G+   GGG +S  SRTQ+   + T+EA Y+AL ++VKE+LFLRQ   F++P +    I + +DN G I++  N  S+  ++HIDV HH + + V+   + + +V    Q AD LTK+L +   +F+ HR  +MN+
Sbjct:  123 GIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSK--DAFESHRDFVMNL 255          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 7.640e-22
Identity = 52/135 (38.52%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   48 GVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            G+   GGG +S  SRTQ+   + T+EA Y+AL E+VK +LFLRQ   F++P +    I + +DN G I++  N  S+  ++HIDV HH + + V+   + + +V    Q AD LTK+L +   +F+ HR  +MN+
Sbjct:   83 GIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSK--DAFESHRDFVMNL 215          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.120e-21
Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 0
Query:    1 MVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            MV+WKA   +       +W   T E G              Y    T     + G+ + GGG  +  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + ++N G I++ +N  +   ++HIDV HH I + V+   + IT+V  E QHAD LTKA+ +   SF  HR  +MN+
Sbjct: 1244 MVHWKAAVGILGYVRRTSWMGITFERGVVTGMGMQVFVDADYASKATDRRSVSGGLVMCGGGCATWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFENNQGAIQIAHNPTTKSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISK--ESFALHRDLVMNL 1430          
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.330e-21
Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 0
Query:    1 MVYWKAVKILHTCGGPRAWGLPTAETGTAGSR-------CGYTQPRTALHVRTPGVRLLGGGVIS--SRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKSYLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVKIEGQHADVLTKALEQALSSFKKHRSALMNV 180
            MV+WKA   +       +W   T E G              Y    T     + G+ + GGG ++  SRTQ+   + T+EA Y+A+++++KE+LFLRQ   F++P      I + +DN G I++ +N  ++  ++HIDV HH I + V+   + IT+V    QHAD LTKA+ +   S   HR  +MN+
Sbjct:  251 MVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISK--ESLGLHRDFVMNL 437          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig172.4011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4G9_9PHAE2.830e-2333.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTT9_9PHAE1.760e-2238.24Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE1.880e-2233.86Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUW6_9PHAE2.450e-2238.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIJ7_9PHAE2.490e-2239.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY5_9PHAE3.280e-2240.00Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JWJ4_9PHAE4.540e-2238.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEZ8_9PHAE7.640e-2238.52Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK7_9PHAE1.120e-2133.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JEF2_9PHAE1.330e-2133.33Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig172contigH-paniculata_contig172:13345..13890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig172.4011.1mRNA_H-paniculata_contig172.4011.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig172 12974..14683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig172.4011.1 ID=prot_H-paniculata_contig172.4011.1|Name=mRNA_H-paniculata_contig172.4011.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp
MVYWKAVKILHTCGGPRAWGLPTAETGTAGSRCGYTQPRTALHVRTPGVR
LLGGGVISSRTQETTAVDTSEAMYMALSEIVKELLFLRQAQAFIMPTLKS
YLIDIMQDNPGTIKMTNNKHSSKRTRHIDVNHHIIHDAVDAGRVLITYVK
IEGQHADVLTKALEQALSSFKKHRSALMNVV*
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