mRNA_H-paniculata_contig14693.2800.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A6H5KZP7_9PHAE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP7_9PHAE) HSP 1 Score: 179 bits (454), Expect = 2.330e-55 Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 333 RDYGG+SRF G VETVKCFENNPLVRQRLT EDG GKVLVVDGGGSLRRALMGDQLAAG +QN WRG+IINGA+RDS+ I KL GCKALGT+P KSEKKVPG + V Sbjct: 42 RDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGAGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPV 150
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A836C6L7_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6L7_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.360e-42 Identity = 73/109 (66.97%), Postives = 86/109 (78.90%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 333 RDYGG+ RFSG + TV+C ENNPLVRQRLT E G G+VLVVDGGGS R AL+GD LAAGAVQN W G+I++G IRDSAAIA+L +G KA+GT P KS K PG + + V Sbjct: 32 RDYGGVRRFSGGIATVRCRENNPLVRQRLTKEAGGGRVLVVDGGGSTRCALLGDMLAAGAVQNGWAGVIVHGCIRDSAAIAQLPLGVKAIGTNPTKSGKADPGEADVPV 140
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A2K3D0A3_CHLRE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D0A3_CHLRE) HSP 1 Score: 136 bits (343), Expect = 1.460e-38 Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 333 RD+GG RFSG+V TV+C+ENNPLVR+ L E G G+VLVVDGG S+R AL+GD LA V+N W GII+NG IRDSA IAK+++G KALGT PLKS K+ PG+ + V Sbjct: 46 RDFGGKLRFSGQVSTVRCYENNPLVRKALE-EPGMGRVLVVDGGASMRCALLGDMLAESGVKNGWAGIIVNGCIRDSADIAKMALGVKALGTHPLKSSKRDPGLRDVLV 153
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A8J4C4G4_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4C4G4_9CHLO) HSP 1 Score: 136 bits (343), Expect = 3.320e-38 Identity = 69/109 (63.30%), Postives = 82/109 (75.23%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 333 RD+GG RFSG+ TVKC+ENNPLVR+ L E G G+VLVVDGGGSLR AL+GD LA V+N W GII+NG IRDSA IA++ +G KALGT PLKS K+ PG + V Sbjct: 75 RDFGGKLRFSGQATTVKCYENNPLVRKALE-EPGIGRVLVVDGGGSLRCALLGDMLAENGVKNGWSGIIVNGCIRDSADIARMPLGVKALGTHPLKSSKRDPGQRDVPV 182
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A090M175_OSTTA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M175_OSTTA) HSP 1 Score: 133 bits (335), Expect = 4.300e-37 Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 333 +DYGGL RF GEV TV CFENNPLVR L E G G+VLVVDGGGS R AL+GD LA A +N W G+I+NG +RDS IAK ++G KA+GT PLKS K+ PG+ + V Sbjct: 67 KDYGGLRRFRGEVSTVLCFENNPLVRLALE-EPGLGRVLVVDGGGSERCALLGDNLAETAARNGWSGVIVNGCVRDSEDIAKFNVGVKAIGTHPLKSSKRDPGLRDVPV 174
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: C1E3D9_MICCC (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E3D9_MICCC) HSP 1 Score: 133 bits (335), Expect = 9.190e-37 Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 333 RD+GG++RFSG TVKC+ENNPLVR+ L GE G G+VLVVDGGGS+R AL+GD LA AV N W GI+ING +RDS I K+ +G KA+ P+KS K+ PGM + V Sbjct: 94 RDFGGVTRFSGPASTVKCYENNPLVREAL-GEPGNGRVLVVDGGGSMRCALLGDNLAGMAVSNGWAGIVINGCLRDSEDIGKMRLGVKAIAPHPVKSSKRDPGMREVPV 201
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A150GI59_GONPE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Chlamydomonadales TaxID=3042 RepID=A0A150GI59_GONPE) HSP 1 Score: 131 bits (330), Expect = 1.210e-36 Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 333 RD+GG RFSG+ TVKC+ENNPL + E G G+VLVVDGGGSLR AL+GD LA V+N W GII+NG IRDSA IA++ +G KALGT PLKS K+ PG+ + V Sbjct: 45 RDFGGKLRFSGQASTVKCYENNPLALE----EPGRGRVLVVDGGGSLRCALLGDMLAENGVKNGWAGIIVNGCIRDSADIARMPLGVKALGTHPLKSSKRDPGLRDVPV 149
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A830HRQ6_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HRQ6_9CHLO) HSP 1 Score: 130 bits (327), Expect = 1.930e-36 Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHVLL 339 RDYGG +F G T+KCFENNPLVR+ LT EDG GKVLVVDGGGS+R AL+GD LAA N W G+I++G +RDS A+ + +IG KA T PLKS K+ G + V++ Sbjct: 22 RDYGGRVKFMGTATTIKCFENNPLVRKALTQEDGKGKVLVVDGGGSMRCALLGDMLAAEGASNGWEGVIVDGCVRDSRALKETNIGVKARDTHPLKSSKRDEGERDVDVVV 132
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: UPI000B20D92E (ribonuclease E activity regulator RraA n=1 Tax=Pedobacter lusitanus TaxID=1503925 RepID=UPI000B20D92E) HSP 1 Score: 129 bits (323), Expect = 2.850e-36 Identity = 65/100 (65.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKK 306 +D+G + F G++ TVKCFE NPLVRQ L +DGTGKVLVVDGGGS R ALMGD +A A+QN W GIII G IRDS A+++LSIG KAL +PLKS KK Sbjct: 25 KDFGAVKAFHGQIVTVKCFEANPLVRQTLE-KDGTGKVLVVDGGGSKRCALMGDNIAELAIQNNWSGIIIFGCIRDSVAVSRLSIGIKALDVVPLKSGKK 123
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: I0Z0K9_COCSC (4-hydroxy-4-methyl-2-oxoglutarate aldolase (Fragment) n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z0K9_COCSC) HSP 1 Score: 129 bits (323), Expect = 4.080e-36 Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 1 Query: 7 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMS 321 RDYGG RFSG+V T+KCFENNPLVR+ L E G G+VL VDGGGSLR AL+GD +A A +N W GI+ING IRDS I K+ +G KAL T PLKS K+ G++ Sbjct: 1 RDYGGNIRFSGQVTTIKCFENNPLVRKALE-EGGEGRVLAVDGGGSLRCALLGDNIAEMAYKNGWSGILINGCIRDSEDIGKMPLGVKALNTYPLKSSKRDHGLT 104 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14693.2800.1 >prot_H-paniculata_contig14693.2800.1 ID=prot_H-paniculata_contig14693.2800.1|Name=mRNA_H-paniculata_contig14693.2800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp DCRDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRback to top mRNA from alignment at H-paniculata_contig14693:2720..3542+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14693.2800.1 ID=mRNA_H-paniculata_contig14693.2800.1|Name=mRNA_H-paniculata_contig14693.2800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=823bp|location=Sequence derived from alignment at H-paniculata_contig14693:2720..3542+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14693:2720..3542+ >mRNA_H-paniculata_contig14693.2800.1 ID=mRNA_H-paniculata_contig14693.2800.1|Name=mRNA_H-paniculata_contig14693.2800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig14693:2720..3542+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |