prot_H-paniculata_contig14693.2800.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig14693.2800.1
Unique Name	prot_H-paniculata_contig14693.2800.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	115

Homology

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A6H5KZP7_9PHAE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP7_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.330e-55
Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 111
            RDYGG+SRF G VETVKCFENNPLVRQRLT EDG GKVLVVDGGGSLRRALMGDQLAAG +QN WRG+IINGA+RDS+ I KL  GCKALGT+P KSEKKVPG   + V
Sbjct:   42 RDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGAGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPV 150

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A836C6L7_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6L7_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.360e-42
Identity = 73/109 (66.97%), Postives = 86/109 (78.90%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 111
            RDYGG+ RFSG + TV+C ENNPLVRQRLT E G G+VLVVDGGGS R AL+GD LAAGAVQN W G+I++G IRDSAAIA+L +G KA+GT P KS K  PG + + V
Sbjct:   32 RDYGGVRRFSGGIATVRCRENNPLVRQRLTKEAGGGRVLVVDGGGSTRCALLGDMLAAGAVQNGWAGVIVHGCIRDSAAIAQLPLGVKAIGTNPTKSGKADPGEADVPV 140

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A2K3D0A3_CHLRE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D0A3_CHLRE)

HSP 1 Score: 136 bits (343), Expect = 1.460e-38
Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 111
            RD+GG  RFSG+V TV+C+ENNPLVR+ L  E G G+VLVVDGG S+R AL+GD LA   V+N W GII+NG IRDSA IAK+++G KALGT PLKS K+ PG+  + V
Sbjct:   46 RDFGGKLRFSGQVSTVRCYENNPLVRKALE-EPGMGRVLVVDGGASMRCALLGDMLAESGVKNGWAGIIVNGCIRDSADIAKMALGVKALGTHPLKSSKRDPGLRDVLV 153

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A8J4C4G4_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4C4G4_9CHLO)

HSP 1 Score: 136 bits (343), Expect = 3.320e-38
Identity = 69/109 (63.30%), Postives = 82/109 (75.23%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 111
            RD+GG  RFSG+  TVKC+ENNPLVR+ L  E G G+VLVVDGGGSLR AL+GD LA   V+N W GII+NG IRDSA IA++ +G KALGT PLKS K+ PG   + V
Sbjct:   75 RDFGGKLRFSGQATTVKCYENNPLVRKALE-EPGIGRVLVVDGGGSLRCALLGDMLAENGVKNGWSGIIVNGCIRDSADIARMPLGVKALGTHPLKSSKRDPGQRDVPV 182

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A090M175_OSTTA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M175_OSTTA)

HSP 1 Score: 133 bits (335), Expect = 4.300e-37
Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 111
            +DYGGL RF GEV TV CFENNPLVR  L  E G G+VLVVDGGGS R AL+GD LA  A +N W G+I+NG +RDS  IAK ++G KA+GT PLKS K+ PG+  + V
Sbjct:   67 KDYGGLRRFRGEVSTVLCFENNPLVRLALE-EPGLGRVLVVDGGGSERCALLGDNLAETAARNGWSGVIVNGCVRDSEDIAKFNVGVKAIGTHPLKSSKRDPGLRDVPV 174

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: C1E3D9_MICCC (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E3D9_MICCC)

HSP 1 Score: 133 bits (335), Expect = 9.190e-37
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 111
            RD+GG++RFSG   TVKC+ENNPLVR+ L GE G G+VLVVDGGGS+R AL+GD LA  AV N W GI+ING +RDS  I K+ +G KA+   P+KS K+ PGM  + V
Sbjct:   94 RDFGGVTRFSGPASTVKCYENNPLVREAL-GEPGNGRVLVVDGGGSMRCALLGDNLAGMAVSNGWAGIVINGCLRDSEDIGKMRLGVKAIAPHPVKSSKRDPGMREVPV 201

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A150GI59_GONPE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Chlamydomonadales TaxID=3042 RepID=A0A150GI59_GONPE)

HSP 1 Score: 131 bits (330), Expect = 1.210e-36
Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHV 111
            RD+GG  RFSG+  TVKC+ENNPL  +    E G G+VLVVDGGGSLR AL+GD LA   V+N W GII+NG IRDSA IA++ +G KALGT PLKS K+ PG+  + V
Sbjct:   45 RDFGGKLRFSGQASTVKCYENNPLALE----EPGRGRVLVVDGGGSLRCALLGDMLAENGVKNGWAGIIVNGCIRDSADIARMPLGVKALGTHPLKSSKRDPGLRDVPV 149

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: A0A830HRQ6_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HRQ6_9CHLO)

HSP 1 Score: 130 bits (327), Expect = 1.930e-36
Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMSVIHVLL 113
            RDYGG  +F G   T+KCFENNPLVR+ LT EDG GKVLVVDGGGS+R AL+GD LAA    N W G+I++G +RDS A+ + +IG KA  T PLKS K+  G   + V++
Sbjct:   22 RDYGGRVKFMGTATTIKCFENNPLVRKALTQEDGKGKVLVVDGGGSMRCALLGDMLAAEGASNGWEGVIVDGCVRDSRALKETNIGVKARDTHPLKSSKRDEGERDVDVVV 132

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: UPI000B20D92E (ribonuclease E activity regulator RraA n=1 Tax=Pedobacter lusitanus TaxID=1503925 RepID=UPI000B20D92E)

HSP 1 Score: 129 bits (323), Expect = 2.850e-36
Identity = 65/100 (65.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKK 102
            +D+G +  F G++ TVKCFE NPLVRQ L  +DGTGKVLVVDGGGS R ALMGD +A  A+QN W GIII G IRDS A+++LSIG KAL  +PLKS KK
Sbjct:   25 KDFGAVKAFHGQIVTVKCFEANPLVRQTLE-KDGTGKVLVVDGGGSKRCALMGDNIAELAIQNNWSGIIIFGCIRDSVAVSRLSIGIKALDVVPLKSGKK 123

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BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Match: I0Z0K9_COCSC (4-hydroxy-4-methyl-2-oxoglutarate aldolase (Fragment) n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z0K9_COCSC)

HSP 1 Score: 129 bits (323), Expect = 4.080e-36
Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 0

Query:    3 RDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLRRALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSEKKVPGMS 107
            RDYGG  RFSG+V T+KCFENNPLVR+ L  E G G+VL VDGGGSLR AL+GD +A  A +N W GI+ING IRDS  I K+ +G KAL T PLKS K+  G++
Sbjct:    1 RDYGGNIRFSGQVTTIKCFENNPLVRKALE-EGGEGRVLAVDGGGSLRCALLGDNIAEMAYKNGWSGILINGCIRDSEDIGKMPLGVKALNTYPLKSSKRDHGLT 104

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig14693.2800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KZP7_9PHAE	2.330e-55	79.82	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A836C6L7_9STRA	3.360e-42	66.97	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A2K3D0A3_CHLRE	1.460e-38	62.39	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=4 Tax...	[more]
A0A8J4C4G4_9CHLO	3.320e-38	63.30	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax...	[more]
A0A090M175_OSTTA	4.300e-37	61.47	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=2 Tax...	[more]
C1E3D9_MICCC	9.190e-37	59.63	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A150GI59_GONPE	1.210e-36	60.55	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax...	[more]
A0A830HRQ6_9CHLO	1.930e-36	56.76	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
UPI000B20D92E	2.850e-36	65.00	ribonuclease E activity regulator RraA n=1 Tax=Ped...	[more]
I0Z0K9_COCSC	4.080e-36	61.90	4-hydroxy-4-methyl-2-oxoglutarate aldolase (Fragme...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010203	Regulator of ribonuclease activity A	TIGRFAM	TIGR01935	TIGR01935	coord: 3..111 e-value: 1.3E-40 score: 136.7
None	No IPR available	GENE3D	3.50.30.40		coord: 1..114 e-value: 3.9E-38 score: 132.7
None	No IPR available	PANTHER	PTHR33254	FAMILY NOT NAMED	coord: 3..107
None	No IPR available	PANTHER	PTHR33254:SF1		coord: 3..107
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	PFAM	PF03737	RraA-like	coord: 8..104 e-value: 6.7E-27 score: 94.5
IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	SUPERFAMILY	89562	RraA-like	coord: 3..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig14693	contig	H-paniculata_contig14693:2720..3542 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig14693.2800.1	mRNA_H-paniculata_contig14693.2800.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig14693 2720..3542 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig14693.2800.1 ID=prot_H-paniculata_contig14693.2800.1|Name=mRNA_H-paniculata_contig14693.2800.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
DCRDYGGLSRFSGEVETVKCFENNPLVRQRLTGEDGTGKVLVVDGGGSLR
RALMGDQLAAGAVQNKWRGIIINGAIRDSAAIAKLSIGCKALGTIPLKSE
KKVPGMSVIHVLLQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010203	RraA
IPR005493	RraA/RraA-like
IPR036704	RraA/RraA-like_sf