mRNA_H-paniculata_contig13324.2080.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.360e-40 Identity = 71/157 (45.22%), Postives = 103/157 (65.61%), Query Frame = 1 Query: 40 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNII 510 F GDY++ ARVR+ G TPK TWTGPWR+V+A HVY V +IV G +VHV R+R YAD+ L V D+ VF + QGE ++ IL+IG + D G Y+V V W G +E +W+P++ I++D PQ+LK++L+KM+L + +K +Y I+ Sbjct: 15 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEVKDNIKKEYGIV 170
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.820e-37 Identity = 71/157 (45.22%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 40 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNII 510 F GDY++ ARVR+ G TPK TWTGPWR+V+A HVY V +IV G +VHV R+R YAD+ L V D+ VF + QGE ++ IL+IG + D G Y+V V W G +E +W+P++ I++D PQ+LK++L+KM+L + +K Y I+ Sbjct: 270 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEIKDNIKKDYGIV 425
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.540e-36 Identity = 71/157 (45.22%), Postives = 103/157 (65.61%), Query Frame = 1 Query: 40 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNII 510 F GDY++ ARVR+ G TPK TWTGPWR+V+A HVY V +IV G +VHV R+R YAD+ L V D+ VF + QGE ++ IL+IG + D G Y+V V W G +E +W+P++ I++D PQ+LK++L+KM+L + +K +Y I+ Sbjct: 1493 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEVKDNIKKEYGIV 1648
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 8.420e-20 Identity = 59/159 (37.11%), Postives = 93/159 (58.49%), Query Frame = 1 Query: 37 EFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNIIM 513 + R + +ARV G+ P + G + IV A HVY V +IV+G +VHV R+R YADA+L + ++ VF A QGEF++ I+D+ + D G + V VEWVG EE++WE ++ + + PQ++K +L+++ L RA LK +Y I + Sbjct: 1577 QASRSKHRASARV---GSLPDFV---VGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELSKMWDAAPQFVKSELRRLGLQKKVRAQLKQQYGIAL 1728
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: W2P9U5_PHYPN (Chromo domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2P9U5_PHYPN) HSP 1 Score: 77.8 bits (190), Expect = 5.150e-15 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 37 EFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVP 429 +F+ GD++L A V + T K W GP ++ A S ++ + ++VTG + E H R++ YAD SL V +D+H A H E +VD + + +LV W GL E SWEP TV+ +DVP Sbjct: 3 QFDVGDFVLCADVWQH-TGAKLRVKWCGPAQVTAATSNWIFEIENLVTGERREAHASRLKFYADNSLAVTEDLHRHVA---HNSEGHVVDTFLSTRYNTNEKRHELLVHWRGLDTVEDSWEPATVLLQDVP 129
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6A3ESV1_9STRA (Chromo domain-containing protein n=9 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3ESV1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 7.440e-14 Identity = 55/146 (37.67%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 40 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTG-AKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDAS 474 F GD++LTA V L K W GP RIV A S +V+ V D++ A + H R++ YADAS V +D+ A A H +V L + + + VEW+GL E SWEP T+I+EDVP+ +KR + + DA+ Sbjct: 55 FTEGDFVLTAHV--LSRANKLAVQWKGPKRIVKALSDYVFEVLDLMAPFAISTHHASRLKFYADASRNVTEDL---VAQAMHADGGHLVSKLVKCRMRPETHTWEIQVEWIGLDPLEASWEPATIIYEDVPELVKRFVLRANSDAA 195
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6A4B5G7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B5G7_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.960e-13 Identity = 55/146 (37.67%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 40 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTG-AKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDAS 474 F GD++LTA V L K W GP RIV A S +V+ V D++ A + H R++ YADAS V +D+ A A H +V L + + + VEW+GL E SWEP T+I+EDVP+ +KR + + DA+ Sbjct: 217 FTEGDFVLTAHV--LSRANKLAVQWKGPKRIVKALSDYVFEVQDLMAPFAISTHHASRLKFYADASRNVTEDL---VAQAMHADGGHLVSKLVKCRMGPETHTWEIQVEWIGLDPLEASWEPATIIYEDVPELVKRFVLRANSDAA 357
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A225UWE1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UWE1_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.250e-12 Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 25 GKCREFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQ 432 G F+ GD++L +R+ + K G W GP++++ A H + + +++G + EVH R++ YADA L ++ + A+ QG VD + + +LV W+GL A E+SWEP+T++ +DVP+ Sbjct: 457 GSTVNFDVGDFVLWSRIDQRLPNNKLLGQWIGPFKVIEA-KPHSFAIQHLISGRQYEVHASRLKYYADADLNQTAELMELVAS---QGMLLGVDAICDHRFNQALQRWELLVSWMGLQAIENSWEPLTILLQDVPK 588
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A080ZI93_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A080ZI93_PHYPR) HSP 1 Score: 72.8 bits (177), Expect = 8.930e-12 Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 94 PKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVP 429 PK W GP ++ A S ++ + ++VTG + E H R++ YAD SL V +D+H A H E +VD + + +LV W GL E SWEP TV+ +DVP Sbjct: 1392 PKLRVKWCGPAQVTAATSNWIFEIENLVTGERREAHASRLKFYADNSLAVTEDLHRHVA---HNSEGHVVDTFLSTRYNTNEKRHELLVHWRGLDTVEDSWEPATVLLQDVP 1500
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6A3DQC9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DQC9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.490e-11 Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 25 GKCREFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVP 429 G FE GD++L +R+ + K G W GP++++ A H + + +++G + +VHV R++ YADA L + QG V+ + + +LV W+GL A E+SWEP+T + +DVP Sbjct: 515 GSVVNFEVGDFVLWSRIDQRLPNNKLLGQWVGPFKVIEA-KPHSFVIQHLISGREYDVHVSRLKFYADAEL---NQTEELLELVSSQGMMLGVEAICDHLFNHTLERWELLVSWMGLQAIENSWEPLTTLLQDVP 645 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13324.2080.1 >prot_H-paniculata_contig13324.2080.1 ID=prot_H-paniculata_contig13324.2080.1|Name=mRNA_H-paniculata_contig13324.2080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp ASEGRQDGGKCREFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAback to top mRNA from alignment at H-paniculata_contig13324:1495..2010+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13324.2080.1 ID=mRNA_H-paniculata_contig13324.2080.1|Name=mRNA_H-paniculata_contig13324.2080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=516bp|location=Sequence derived from alignment at H-paniculata_contig13324:1495..2010+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13324:1495..2010+ >mRNA_H-paniculata_contig13324.2080.1 ID=mRNA_H-paniculata_contig13324.2080.1|Name=mRNA_H-paniculata_contig13324.2080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig13324:1495..2010+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |