prot_H-paniculata_contig13324.2080.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig13324.2080.1
Unique Name	prot_H-paniculata_contig13324.2080.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	172

Homology

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 2.360e-40
Identity = 71/157 (45.22%), Postives = 103/157 (65.61%), Query Frame = 0

Query:   14 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNII 170
            F  GDY++ ARVR+ G TPK   TWTGPWR+V+A   HVY V +IV G   +VHV R+R YAD+ L V  D+  VF  +  QGE ++  IL+IG + D  G Y+V V W G   +E +W+P++ I++D PQ+LK++L+KM+L    +  +K +Y I+
Sbjct:   15 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEVKDNIKKEYGIV 170

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 2.820e-37
Identity = 71/157 (45.22%), Postives = 102/157 (64.97%), Query Frame = 0

Query:   14 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNII 170
            F  GDY++ ARVR+ G TPK   TWTGPWR+V+A   HVY V +IV G   +VHV R+R YAD+ L V  D+  VF  +  QGE ++  IL+IG + D  G Y+V V W G   +E +W+P++ I++D PQ+LK++L+KM+L    +  +K  Y I+
Sbjct:  270 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEIKDNIKKDYGIV 425

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 2.540e-36
Identity = 71/157 (45.22%), Postives = 103/157 (65.61%), Query Frame = 0

Query:   14 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNII 170
            F  GDY++ ARVR+ G TPK   TWTGPWR+V+A   HVY V +IV G   +VHV R+R YAD+ L V  D+  VF  +  QGE ++  IL+IG + D  G Y+V V W G   +E +W+P++ I++D PQ+LK++L+KM+L    +  +K +Y I+
Sbjct: 1493 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEVKDNIKKEYGIV 1648

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.420e-20
Identity = 59/159 (37.11%), Postives = 93/159 (58.49%), Query Frame = 0

Query:   13 EFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDASTRAALKAKYNIIM 171
            +  R  +  +ARV   G+ P +     G + IV A   HVY V +IV+G   +VHV R+R YADA+L +  ++  VF  A  QGEF++  I+D+  + D  G + V VEWVG   EE++WE ++ + +  PQ++K +L+++ L    RA LK +Y I +
Sbjct: 1577 QASRSKHRASARV---GSLPDFV---VGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELSKMWDAAPQFVKSELRRLGLQKKVRAQLKQQYGIAL 1728

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: W2P9U5_PHYPN (Chromo domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2P9U5_PHYPN)

HSP 1 Score: 77.8 bits (190), Expect = 5.150e-15
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 0

Query:   13 EFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVP 143
            +F+ GD++L A V +  T  K    W GP ++  A S  ++ + ++VTG + E H  R++ YAD SL V +D+H   A   H  E  +VD          +  + +LV W GL   E SWEP TV+ +DVP
Sbjct:    3 QFDVGDFVLCADVWQH-TGAKLRVKWCGPAQVTAATSNWIFEIENLVTGERREAHASRLKFYADNSLAVTEDLHRHVA---HNSEGHVVDTFLSTRYNTNEKRHELLVHWRGLDTVEDSWEPATVLLQDVP 129

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6A3ESV1_9STRA (Chromo domain-containing protein n=9 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3ESV1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 7.440e-14
Identity = 55/146 (37.67%), Postives = 78/146 (53.42%), Query Frame = 0

Query:   14 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTG-AKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDAS 158
            F  GD++LTA V  L    K    W GP RIV A S +V+ V D++   A +  H  R++ YADAS  V +D+    A A H     +V  L       +   + + VEW+GL   E SWEP T+I+EDVP+ +KR + +   DA+
Sbjct:   55 FTEGDFVLTAHV--LSRANKLAVQWKGPKRIVKALSDYVFEVLDLMAPFAISTHHASRLKFYADASRNVTEDL---VAQAMHADGGHLVSKLVKCRMRPETHTWEIQVEWIGLDPLEASWEPATIIYEDVPELVKRFVLRANSDAA 195

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6A4B5G7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B5G7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.960e-13
Identity = 55/146 (37.67%), Postives = 78/146 (53.42%), Query Frame = 0

Query:   14 FERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTG-AKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKLKKMRLDAS 158
            F  GD++LTA V  L    K    W GP RIV A S +V+ V D++   A +  H  R++ YADAS  V +D+    A A H     +V  L       +   + + VEW+GL   E SWEP T+I+EDVP+ +KR + +   DA+
Sbjct:  217 FTEGDFVLTAHV--LSRANKLAVQWKGPKRIVKALSDYVFEVQDLMAPFAISTHHASRLKFYADASRNVTEDL---VAQAMHADGGHLVSKLVKCRMGPETHTWEIQVEWIGLDPLEASWEPATIIYEDVPELVKRFVLRANSDAA 357

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A225UWE1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UWE1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.250e-12
Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = 0

Query:    9 GKCREFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQ 144
            G    F+ GD++L +R+ +     K  G W GP++++ A   H + +  +++G + EVH  R++ YADA L    ++  + A+   QG    VD +           + +LV W+GL A E+SWEP+T++ +DVP+
Sbjct:  457 GSTVNFDVGDFVLWSRIDQRLPNNKLLGQWIGPFKVIEA-KPHSFAIQHLISGRQYEVHASRLKYYADADLNQTAELMELVAS---QGMLLGVDAICDHRFNQALQRWELLVSWMGLQAIENSWEPLTILLQDVPK 588

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A080ZI93_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A080ZI93_PHYPR)

HSP 1 Score: 72.8 bits (177), Expect = 8.930e-12
Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 0

Query:   32 PKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVP 143
            PK    W GP ++  A S  ++ + ++VTG + E H  R++ YAD SL V +D+H   A   H  E  +VD          +  + +LV W GL   E SWEP TV+ +DVP
Sbjct: 1392 PKLRVKWCGPAQVTAATSNWIFEIENLVTGERREAHASRLKFYADNSLAVTEDLHRHVA---HNSEGHVVDTFLSTRYNTNEKRHELLVHWRGLDTVEDSWEPATVLLQDVP 1500

[Close]

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Match: A0A6A3DQC9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DQC9_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.490e-11
Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 0

Query:    9 GKCREFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSAHVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQIVDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVP 143
            G    FE GD++L +R+ +     K  G W GP++++ A   H + +  +++G + +VHV R++ YADA L        +      QG    V+ +           + +LV W+GL A E+SWEP+T + +DVP
Sbjct:  515 GSVVNFEVGDFVLWSRIDQRLPNNKLLGQWVGPFKVIEA-KPHSFVIQHLISGREYDVHVSRLKFYADAEL---NQTEELLELVSSQGMMLGVEAICDHLFNHTLERWELLVSWMGLQAIENSWEPLTTLLQDVP 645

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig13324.2080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KAI3_9PHAE	2.360e-40	45.22	Chromo domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JVS6_9PHAE	2.820e-37	45.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L7F6_9PHAE	2.540e-36	45.22	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A5_9PHAE	8.420e-20	37.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
W2P9U5_PHYPN	5.150e-15	35.88	Chromo domain-containing protein n=7 Tax=Phytophth...	[more]
A0A6A3ESV1_9STRA	7.440e-14	37.67	Chromo domain-containing protein n=9 Tax=Phytophth...	[more]
A0A6A4B5G7_9STRA	1.960e-13	37.67	Uncharacterized protein n=3 Tax=Phytophthora rubi ...	[more]
A0A225UWE1_9STRA	1.250e-12	31.62	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]
A0A080ZI93_PHYPR	8.930e-12	36.61	Uncharacterized protein n=2 Tax=Phytophthora paras...	[more]
A0A6A3DQC9_9STRA	1.490e-11	31.11	Uncharacterized protein n=4 Tax=Phytophthora fraga...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 97..150 e-value: 0.0011 score: 28.2
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 98..161 score: 10.313
None	No IPR available	GENE3D	2.40.50.40		coord: 85..153 e-value: 5.7E-7 score: 31.2
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 94..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig13324	contig	H-paniculata_contig13324:1495..2010 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig13324.2080.1	mRNA_H-paniculata_contig13324.2080.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig13324 1495..2010 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig13324.2080.1 ID=prot_H-paniculata_contig13324.2080.1|Name=mRNA_H-paniculata_contig13324.2080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
ASEGRQDGGKCREFERGDYLLTARVRKLGTTPKWFGTWTGPWRIVTAGSA
HVYTVGDIVTGAKNEVHVVRVRPYADASLVVGKDVHAVFAAAQHQGEFQI
VDILDIGESPDKKGEYVVLVEWVGLGAEEHSWEPVTVIHEDVPQYLKRKL
KKMRLDASTRAALKAKYNIIM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR016197	Chromo-like_dom_sf