prot_H-paniculata_contig967.17353.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
ZOOM
x 1
POSITION
0
MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEDDESEDDGEDVDGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCEANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSKQLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFEDGVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTGLWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDEDEDGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEGDDEDDEGSVDMEAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQPT*20040060080010001200140016001800Expect = 2.6E-113 / Score = 392.4Expect = 6.0E-55 / Score = 187.9Expect = 5.9E-8 / Score = 34.2Expect = 7.8E-6 / Score = 27.5Expect = 1.6E-12 / Score = 49.6Expect = 7.7E-27 / Score = 95.8Expect = 1.5E-74 / Score = 251.6Expect = 1.5E-74 / Score = 251.6Expect = 2.8E-6 / Score = 29.8Score = Score = Score = Expect = 6.6E-57 / Score = 193.8Expect = 1.9E-81 / Score = 273.4Expect = 1.7E-57 / Score = 194.2Expect = 1.1E-23 / Score = 84.0Expect = 2.9E-19 / Score = 69.0Expect = 4.5E-32 / Score = 111.2Score = SequenceSM00663G3DSA:1.10.132.30G3DSA:2.20.25.410G3DSA:1.10.150.390G3DSA:3.30.70.2850G3DSA:1.20.120.1280G3DSA:3.30.1490.180G3DSA:2.40.40.20G3DSA:1.10.357.120PTHR19376SSF64484SSF64484G3DSA:1.10.274.100PF04998PF00623PF04997PF05000PF04983PTHR19376:SF11
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006592RNA polymerase, N-terminalSMARTSM00663rpolaneu7coord: 397..704
e-value: 2.6E-113
score: 392.4
IPR038120RNA polymerase Rpb1, funnel domain superfamilyGENE3D1.10.132.30coord: 853..1032
e-value: 6.0E-55
score: 187.9
NoneNo IPR availableGENE3D2.20.25.410coord: 1076..1117
e-value: 5.9E-8
score: 34.2
NoneNo IPR availableGENE3D1.10.150.390coord: 1832..1875
e-value: 7.8E-6
score: 27.5
NoneNo IPR availableGENE3D3.30.70.2850coord: 1452..1631
e-value: 1.6E-12
score: 49.6
NoneNo IPR availableGENE3D1.20.120.1280coord: 2..126
e-value: 7.7E-27
score: 95.8
NoneNo IPR availableGENE3D3.30.1490.180coord: 535..604
e-value: 1.5E-74
score: 251.6
NoneNo IPR availableGENE3D2.40.40.20coord: 492..670
e-value: 1.5E-74
score: 251.6
NoneNo IPR availableGENE3D1.10.357.120coord: 1255..1368
e-value: 2.8E-6
score: 29.8
NoneNo IPR availablePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 9..1879
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 12..1393
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 1359..1878
IPR042102RNA polymerase Rpb1, domain 3 superfamilyGENE3D1.10.274.100coord: 680..852
e-value: 6.6E-57
score: 193.8
IPR007081RNA polymerase Rpb1, domain 5PFAMPF04998RNA_pol_Rpb1_5coord: 1030..1828
e-value: 1.9E-81
score: 273.4
IPR000722RNA polymerase, alpha subunitPFAMPF00623RNA_pol_Rpb1_2coord: 502..674
e-value: 1.7E-57
score: 194.2
IPR007080RNA polymerase Rpb1, domain 1PFAMPF04997RNA_pol_Rpb1_1coord: 11..261
e-value: 1.1E-23
score: 84.0
IPR007083RNA polymerase Rpb1, domain 4PFAMPF05000RNA_pol_Rpb1_4coord: 937..1023
e-value: 2.9E-19
score: 69.0
IPR007066RNA polymerase Rpb1, domain 3PFAMPF04983RNA_pol_Rpb1_3coord: 679..858
e-value: 4.5E-32
score: 111.2
IPR015699DNA-directed RNA pol I, largest subunitPANTHERPTHR19376:SF11DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1coord: 9..1879