mRNA_H-paniculata_contig967.17353.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 2405 bits (6233), Expect = 0.000e+0 Identity = 1288/1910 (67.43%), Postives = 1492/1910 (78.12%), Query Frame = 3 Query: 204 MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRD-DVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDS--TAAPKVED--KFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTL-QAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLN--EQDGCEANTDTNGNS----SLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSKQLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRF-EDGVVVRKMPLKVMVSSSGGELEDSGSGSDSED--------QAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRT---AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTGLWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQ---ESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEAASEVDD---LTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 MSHDRTVIRHAVEEIGFGF TD+DIRKLSVK ITSPVTFDTLNNPLPGGLYDP LGPVD+ M+C TCGQDQKNCPGH+GHI+LAVSVY P+LFGAL+KL+RAKCF+CHNLRLS+S+TRV AVKMMLVDAGR Q+ALEL+ TLLGYL+ DG +D DV +T D LVSA +DRVLG LE++L PRA WCGGHNR +RRQ+ E IK +G CK+C+NCGA SP IRKD +NKLFQVPL++K R AN+ N+ I+SAVQ RDPG P D XXXXXXXXXXX +G + + + L AA +D+ AA + +FMP IEVELQMQ LW++E L+L+F + DVSG + + L + +GYR FF+R +AVPPPRFRPPM+MGD +AEHPQN++L KVL LNE LKNA+SLKG+DL+SVLTTWVELQTTVNC++DSSKDPRG+K+ PGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTY QPVADWNV+AMR LVE G + YPGANFVED+ GR+LHLDRLSDLKRRGVAARLLS PGQKVWRHL DGDCMLVNRQPTLHKPGIMAHRVRVLRNP YQTIRMHYANCNTYNADFDGDEINCHLPQNE+AKAEANLLAFTDEQYLVPT+G PLRGLIQDHVD GVKMCSKDCFFT+GEYQQLVYQALSGLPGLEIVPPS I TLPP+I+KP QRW+GKQVMSTIL+HLT GLPQLNLDGK+RTP VAFG +E EH+I+FREGELLQGVLDKGAFG+S++GLVHAVHE+YGSTAAG+LLTALGRVLTIFLQS+GHTCGIEDLTL AE +RRE+I +S GIGQR+M+E+++ +G A NG+ +L E VEDIRQ+TA FLLGE RD RLAEIDRHMQSALAPVSSDIIKACLP GQ KPFP NCFSLMVLTGAKGS VNHSQVSCALGQQALEGRRVPVM+SGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK VGYDNTVRDGEGCV QFLYGEDG+DTTQTKYL SKQL FLA+NY ALR KH I PSF+++ GFD A AH+EI A A+Q + GA+ + FV G+ V A+R+ L +GG+ W +A L W AEV++V+ AGT A+Y++R+ +DG + ++MPL S DS + E+ + R L++ G +PDPV S L+VNKDLGCVSEAFQ SL+ FLD +PASLR + ++ GA +G +S R+ AFELLMWVKYMRCLA PGE VGSIAAQS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA++NLKTPS VP+R+G + A LA RLSRL LSQLL N+GGIVVRER+VK +TGLWERHY + L+LF I AFDI FK++CR + +F+P+LL+ I DLRRTG KL+ G + RG+ GD D+++ + Q A AK+ K++AE+ESDD QGTL FGK+KEQ+SYGGMDEEEKAIWKAMSGK+ + + G++ + + G D + DD LP ++ + KG++ N+K GE+EV V+L SS RRLLMVGLAE+AAAKTMVRS KGIRGA+VV+ + GK+ + +Q+EGS FETVWQLKEGG G+L+L++L+SND+WA+CQTYGVEAARASI SEIT VFGAYGI VD RHLGLVADHMTF+G YRPLNRAGMADFSSPCLQMSFETT +FM KAAV+ SSDRLKSPSARIV+GRVG +GTGMF+LRQP Sbjct: 1 MSHDRTVIRHAVEEIGFGFLTDDDIRKLSVKRITSPVTFDTLNNPLPGGLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALFKLLRAKCFSCHNLRLSKSKTRVAAVKMMLVDAGRAQEALELDATLLGYLK-DGAKDHDVLDGNTEDT--LVSATKHRDRVLGCLEEDLADAPRADWCGGHNRQLRRQLAENLIKAIGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQTCNTQIVSAVQRRDPGK-----PNEDXXXXXXXXXXXXXXXXXXXXXXXDDIAGSAPSSKV-VGVPLAAAQADAGNPAAKRGAQFHEFMPPIEVELQMQQLWKQECSTLDLIFVSDRRTRTVPG--DVSGARSSSSQNVDGLHRGGISDGYRFFFMRVLAVPPPRFRPPMNMGDLIAEHPQNVHLTKVLNLNESLKNADSLKGDDLASVLTTWVELQTTVNCYMDSSKDPRGLKETPPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSIPGQKVWRHLKDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQNELAKAEANLLAFTDEQYLVPTNGKPLRGLIQDHVDAGVKMCSKDCFFTKGEYQQLVYQALSGLPGLEIVPPSDDITTLPPAILKPQQRWTGKQVMSTILRHLTKGLPQLNLDGKSRTPKVAFGEAEQEHVIVFREGELLQGVLDKGAFGSSEFGLVHAVHEVYGSTAAGKLLTALGRVLTIFLQSSGHTCGIEDLTLTAGAEGNRREIIKKSLGIGQRSMRELVDTASAEGQNAKAIANGDEDTGKALVEADVEDIRQKTAFFLLGEDRDTRLAEIDRHMQSALAPVSSDIIKACLPGGQAKPFPHNCFSLMVLTGAKGSMVNHSQVSCALGQQALEGRRVPVMVSGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK------VGYDNTVRDGEGCVHQFLYGEDGIDTTQTKYLSSKQLGFLAQNYQALRHKHGITPSFKNDAGFDCRNASRAHSEI--ATAQQRSDDASGAAGAS--RAKFVAGETVLAKRRTVL---------NGGEGWGKAELLAGWHSAEVMKVRKAGTPAALYSVRYKDDGAMAKRMPLSAPQEGSSENSSDSSPNENGENGHPSSRRRKRPRRLLRKCPGAG---LPDPVLSTLNVNKDLGCVSEAFQKSLQAFLDSNPASLRGDHTNDSSKA---GAATGRLSSPGVRSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRSTARSLARRLSRLPLSQLLDNRGGIVVRERLVKENTGLWERHYVVCLRLFRPSIISMAFDISFKELCRKISGVFVPNLLSAIANDLRRTGNKLSQTGGASVGLPP---RGRGERAGDEE--DDLEGQISAIPQSNAGAKKASKAEAEYESDDEDEE-QGTLKFGKQKEQSSYGGMDEEEKAIWKAMSGKEANGGVLGEEDGDDDGNDDEGMGGADGVGNDKNDDRDYFNLP-NISGARHLKGITKNKKTGEVEVTVRLPSSMRRLLMVGLAESAAAKTMVRSHKGIRGAFVVDMTVEGKSGLAVQLEGSDFETVWQLKEGGVDGILNLDKLTSNDIWAVCQTYGVEAARASIVSEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGSFGTGMFDLRQP 1867
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: D7FNY1_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY1_ECTSI) HSP 1 Score: 1732 bits (4485), Expect = 0.000e+0 Identity = 897/1264 (70.97%), Postives = 1012/1264 (80.06%), Query Frame = 3 Query: 204 MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRD-DVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLV--AASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQI------------EFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNE--QDGCEANTDTNG----------NSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSKQLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLR 3914 MSHDRTVIRHAVEEIGFGF TD+DIR+LSVK ITSPVTFDTLNNPLPGGLYDP LGPVD+ M+CETCGQDQKNCPGH+GHI+LAVSVY P+LFGALYKL+RAKCF+CHNLRLS+S+TRV AVKMMLVDAGR Q+ALEL+ TLLGYL+ DG RD DV +T D LVSA ++D VLG LE++L G PRA WCGGHNR +RRQ+ E IK MG CK+C+NCGA SP IRKD +NKLFQVPL++K R AN++ N+ I+SAVQ RDPG P D XXXXXX G + G++ AA +T KFMP IEVELQMQ LW+ E L+L+F G+ F Q + D++GG ++D GYRLFF+RA+AVPPPRFRPPM+MGD +AEHPQN+YL KVL LNE LKNA SLKG+DL+SVLTTWVELQTTVNC++DSSKDPRG+KD PGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPY+GTTEIGIPLRFAKELTY QPVADWNV+AMR LVE G + YPGANFVED+ GR+LHLDRLSDLKRRGVAARLLS+PGQKVWRHL DGDCMLVNRQPTLHKPGIMAHRVRVLRNP YQTIRMHYANCNTYNADFDGDEINCHLPQNE+AKAEANLLAFTDEQYLVPT+G PLRGLIQDHVD GVKMCSKDCFFTRGEYQQL+YQALSGLPGLEIVPPS I TLPP+I+KP QRW+GKQVMSTIL+HLT GLPQLNLDGK+RTP VAFG +E EH+I+FREGELLQGVLDKGAFG+S++GLVHAVHE+YGSTAAG+LLTALGRVLTIFLQS+GHTCGIEDLTL +AE +RRE+I++S GIGQR+M+E++ +G +A NG + +L E VE IRQ+TA+FLLGE RD RLAEIDRHMQSALAPVSSDIIKACLP GQ KPFP NCFSLMVLTGAKGS VNHSQVSCALGQQALEGRRVPVM+SGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK VGYDNTVRDGEGCV QFLYGEDGVDTTQTKYL SKQL FLA+NY ALR KH I PSF+ ++GFD A AH+EI + ++ + P + FV G++V A+R+ L G+ W +A L W AEV++V++AGT A+Y++R Sbjct: 1 MSHDRTVIRHAVEEIGFGFLTDDDIRRLSVKRITSPVTFDTLNNPLPGGLYDPVLGPVDKMMMCETCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKMMLVDAGRAQEALELDATLLGYLK-DGARDHDVLDGNTEDT--LVSATKYRDHVLGCLEEDLAGAPRAEWCGGHNRQLRRQLAENLIKAMGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQSCNTQIVSAVQRRDPGK-----PNEDXXXXXXXXXXXXXXXXXXNLEDDDVGGSAPSSKVVGVSLAAAQAAAGDPATKTGAQAHKFMPPIEVELQMQQLWKLESSVLDLIFVSGRRTRSAPGDVNGPPSFSLQNANDLAGGSISD-------------GYRLFFVRALAVPPPRFRPPMNMGDMIAEHPQNVYLTKVLNLNESLKNAASLKGKDLASVLTTWVELQTTVNCYMDSSKDPRGLKDTPPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQNELAKAEANLLAFTDEQYLVPTNGKPLRGLIQDHVDAGVKMCSKDCFFTRGEYQQLLYQALSGLPGLEIVPPSDDITTLPPAILKPQQRWTGKQVMSTILRHLTKGLPQLNLDGKSRTPKVAFGEAEQEHVIVFREGELLQGVLDKGAFGSSEFGLVHAVHEVYGSTAAGKLLTALGRVLTIFLQSSGHTCGIEDLTLTGRAEGNRREIINKSLGIGQRSMRELVETVAAEGQDAKAIANGAAAEEGHEDTSKALVEAEVESIRQKTASFLLGEDRDTRLAEIDRHMQSALAPVSSDIIKACLPGGQAKPFPHNCFSLMVLTGAKGSMVNHSQVSCALGQQALEGRRVPVMVSGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK------VGYDNTVRDGEGCVHQFLYGEDGVDTTQTKYLSSKQLGFLAQNYQALRHKHGITPSFKKDSGFDSRDASRAHSEIATCLQRRDDAAANPSSSC----AKFVAGEMVLAKRRAVL---------KRGEGWGKAELLAGWHSAEVVKVRNAGTPAALYSVR 1224
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 1667 bits (4318), Expect = 0.000e+0 Identity = 972/1898 (51.21%), Postives = 1189/1898 (62.64%), Query Frame = 3 Query: 204 MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQS-RDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIE-FLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPR-GMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCEANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTT------RAVYTLRFE-DGVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRV-LIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGG-IVVRERIVKGDTGLWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEI-EXXXXXDEGS---VDMEAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 MSHDR VIRH VEE+ FGF + ++IR +SVK ITSP+TFD LNNPLPGGLYDPALGP + VC TCGQD +CPGH+GHI+LA VY PLLF L+KL++ KCF+CH LR++ R+ AVKM L DAG T A L+ + G + D+ D PD +SA +L RRQ+ + IK +G CKKCQNCGA SP +RKD KLF PL++K ++AN V + + SA+Q+ +D + N G+DSD XXXXXXXXXXX D+++ +E + QMQLLW KE L+LLF L A + V+G +G+RLFF++ +AVPPPRFRPPM M D VAEHPQN YL K +NCFIDSSKD KD APGLRQ+LEKKEGLFRKHMMGKRVN++CRSVISPDPY+GTTEIGIP RFAK L + QPVA WNV+ +R LVE GA+ YPGAN++EDA G+L++L R S ++R+G+AARLLS PGQKVWRHL D D MLVNRQPTLHKPGIMAH R+LRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVA+AEAN+LAFT+EQYLVPT G PLRGLIQD VD GVK+CSK + TR ++QQL++Q I P I T P+I+KP Q WSGKQV S IL+HLT GLPQLNLD K +TPAVAFG EH ++ REGELLQGVLDK AFGA+++GLVH+VHELYG+ AAG LLT+LGRVL FLQ AGHTCGIEDLTL AE RR +I IR +TA L G + +D M S L+ V+SDIIKACLP GQEKPFP N FSLMVLTGAKGS VNHSQVSC LGQQALEGRRVP+MISGKSLPSFQAF+ +PRANGFITDRFLTGIRPQ+YYFHCMAGREGLVDTAVKTSRSGYLQRCL+KHLEELK V YD TVRDG+G V QF+YGEDG+D TQ+K++ QL+F+ARNY A+ K+ + + F+V +A AH + A+ K + F VG V ARR R G + W L K W A +++V HA ++ R YTLR+ DG+ RK+PL + + ++ L A RV LI+ DPV S L+VN+DLG VSE F + L F+ A H G SG AA R F ++MWVKYMR LAAPGEAVG+IA QS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREI+MTASR LKTP+ +VP+ GV++ E LA L+RL L +LL N GG + VRE++ KGDTGLWERHY I L+LFP + I+KAF + FK++CRA+ F+P LL + +LRR GE A++ A+ K +S D GQGTL FG+KKEQASYG MD++EK +WKAM GK L DD D+ + +G +D + +D L L V+N+ + + N+ + V +K +S RRLLMVG+AEAAAA ++VRS I +++VE+++ G+NR+ +Q EG+ F T+W L G +LDL QL+SN ++ M +YGVEA RA+IT EI VF YGI VD RHLGL+AD+MTF G YR +NR GM D +SP LQMSFETTA F+ +AA+ ++LKSPSARIV+G+VGD+GTG F+L P Sbjct: 1 MSHDRQVIRHKVEEVKFGFLSGDEIRAISVKQITSPLTFDALNNPLPGGLYDPALGPSQQRAVCPTCGQDHLSCPGHVGHIELAAEVYHPLLFPILFKLLKTKCFSCHKLRMNSQTCRIYAVKMALCDAGETNMARSLDAEIAGG-GAEANTDEGDEDLLPDKAETISA------IL----------------------ARRQIADDVIKAIGACKKCQNCGAFSPVLRKDGHTKLFLKPLSDKMQKANNLVAAKMGSAMQAIKDKAAAAN--------QPGNDSDXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXDEHDQYVSPLEAQAQMQLLWEKEGHLLSLLFKTSMPPPKLLSAPQPVAG--------------YDPQGFRLFFMKTIAVPPPRFRPPMVMADMVAEHPQNQYLTK------------------------------NQINCFIDSSKDTSVNAKDAAPGLRQILEKKEGLFRKHMMGKRVNHSCRSVISPDPYIGTTEIGIPERFAKVLCFPQPVAAWNVEHLRTLVENGADFYPGANYIEDAAGKLINLRRQSAVQRKGMAARLLSEPGQKVWRHLQDRDAMLVNRQPTLHKPGIMAHHARILRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVARAEANVLAFTNEQYLVPTDGKPLRGLIQDSVDAGVKLCSKSTWLTREDFQQLMFQ---------ITGPGTPIRTPQPAILKPKQLWSGKQVFSCILQHLTAGLPQLNLDAKTKTPAVAFGEQWQEHRVVIREGELLQGVLDKAAFGATEFGLVHSVHELYGADAAGSLLTSLGRVLVTFLQFAGHTCGIEDLTLTQSAEKERRRLIGT--------------------------------------IRAKTAEMLAGNDMASQAGALDGFMMSELSGVASDIIKACLPGGQEKPFPSNNFSLMVLTGAKGSMVNHSQVSCGLGQQALEGRRVPIMISGKSLPSFQAFDSNPRANGFITDRFLTGIRPQDYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEELK------VEYDGTVRDGDGGVFQFMYGEDGIDATQSKFMSGAKPQLEFMARNYRAIVHKYDLDQGILDK--FNVEKAVEAHDAVSYAQGKD-------------DGALFEVGQSVSARRLRK-----------GREDWCRENLRKGWFTATIVKV-HASSSDAASPERTKYTLRYAADGMEARKVPLTIKLPTAADTLG-----------ASRVPLIQRCS-------ADPVLSTLNVNQDLGAVSERFHARLEAFMA--------------AESHRRGLLSGRRGAAA-RDDFTVMMWVKYMRSLAAPGEAVGAIAGQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIVMTASRALKTPAATVPLLRGVSRAQGEALARLLTRLPLLELLLNTGGGVTVREKLGKGDTGLWERHYVIALRLFPAKKILKAFSLTFKQLCRAISQTFVPRLLRLVATELRRCGELAAARSKKSAVS---------------------------KAKXXXXXXXXXXXXDSGDEE--GQGTLKFGRKKEQASYGDMDDDEKEMWKAMKGKGGDPLNSDDDGDDASDDGRSRGDGQTTQLDGDEQDGLDFLDLSTGVKNNQMFGRMDFNKASNTVTVTLKFPASVRRLLMVGIAEAAAATSVVRSHGKIGRSFLVEQLIGGENRMALQTEGADFATLWALGPREGGTLLDLPQLASNHIYGMLMSYGVEACRAAITKEIAAVFAVYGIGVDARHLGLIADYMTFYGGYRAMNRIGMKDIASPFLQMSFETTASFLVQAALDSKVEKLKSPSARIVMGQVGDFGTGQFDLMVP 1658
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC) HSP 1 Score: 1431 bits (3705), Expect = 0.000e+0 Identity = 866/1961 (44.16%), Postives = 1172/1961 (59.77%), Query Frame = 3 Query: 198 SIMSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQA--NRAVNSDILSAV----QSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGD-FVAEHPQNIYLQKVLGLNEKLK-------------NAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPR---GMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLN-------------------EQDGCEANTDTNGNSSLPEETVEDIRQRTATFL---LGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAK---QAMCHSGPPVGATAGESSFVVGDIVFARR-KRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHA-GTTR-AVYTLRF-EDGVVVRKMPLKV---MVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPV--QSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFN-KGGIVVRERIVK-GDTGL-WERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEK-----LTAKNGVGAMMFSGKNASRGQDGGDATA-----ADNVQESFAQKMATAKRVRKSDAEFESDDXXXX------GQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN-RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 SI +R V+RH V E+ FG + +E+I +LSV +++ T+D L NPLPGGLYDPA+GP+D +C TC ++CPGH+GH L++ VY PL FG +++ +R KCF CH RLS V A+K+ L+DAG +A L+ L R D R + D + R+ +L+ Q P++ W G + RR +++ F++++ CK C C A +RKD K F + R+A +R + I SA+ R GNG GDDSD E S + AA T A E +M EV++ M+LLW E L++ +E ++ G + +G++ F R + V P RFRPP D +AEHPQN + K++ L+E+++ E+L E LS VL+TW++LQ VN +IDSSKD G ++ PG+RQ LEKKEGLFR HMMGKRVN+ACRSVISPDPY+GT+EIG+PLRFAK LTY+QPV +N +R VE GA +PGAN+VEDA+GRL+ L R+ +RR +AARLL+ PGQ VWRHL DGD +L+NRQPTLHKPGIMAHR RVLR+P QTIRMHYANCNTYNADFDGDE+NCH PQ+E+++AEA +A TDEQYL PT+G PLRGLIQDHV GVK+ KDCF +R ++Q +++ LSGLPG+E+VPP G I+ P+I KP + W+GKQ++S +L+HL+ GLP LNLD KA+TPAVAFG + EH ++ R G+L++GVLDK AFGAS+ GLVH V+E YG AG+LLTALGR+ T++LQ AGHTCG+EDL L+ AE RR +I+++ +G AM + E+DG A+ L + ++ RTA L + G+ + A ID M++ L+PVSSDIIKACLPDG KPFP N FSLMV TGAKGS VN SQ+SC LGQQ LEGRRVP+M SGKSLPSF ++PSPRA GFI DRFLTG+RPQEYYFHCMAGREGL+DTAVKTSRSGYLQRCLVK LEEL RV YDNTVRD + V QFLYGEDGVD KYL + Q+ LARN+ AL ++ + F TG D+ A+ H EI++A+ + QA + A + VG++V +R KR+ W W+ AEV++V A G +R A Y LR+ DG V +++P ++ +V S + S D +D +PDPV +++ + LG +SE FQ ++ +L DP L F + G + AG ELL+W+KYMR L +PGEAVGSIA QSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRN KTPS +VP+ +++ +A+RL+ RL RL L +++ + +GG++V+ER+ + +G+ W+R+YT++L+L + +AF + +++ + T F+ LLA + A+LR+ + L + G A + ++ +D D T ++ + T+ ++ D + E XXXX QGTL+FG+K+E+ Y + E ++ + ++ + S DD+ A + + ++ + R+ G + +K +S+RRLLMV + EAAA + VR KGI A+VVE GK+ R IQ EG + +W++ GD LDLN ++SND+WAM QTYGVEAARA+I EI VFGAYGI VD RHLGLVAD MT+ G +R LNR GM++ SSP LQMSFETTA F+T+AA++ D L++PSA++V+G+ GTG F++ P Sbjct: 6 SITMTERCVVRHDVSEVQFGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALF---RADLHRSTILRD-------------TEMRLRRHLQTAGQ-VPKS-WIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTVRKDGYTKFFV-----RGRRAGHSRGAGAHIPSALAVVRNGRHEVECGNGF--------GDDSDGEE--------------SEXXXXXXXXASQERFAARGGDTEAEGGE--YMAPAEVQMHMKLLWEAEPELATLIWGKAAVEKSVFSAPGADTG--------------RADGWKTLFWRVLPVTPSRFRPPSKNDDGSLAEHPQNYNVIKIMNLDERIRALLRKEDGGEGATGPENLPAEALSRVLSTWIDLQNAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQTVWRHLQDGDMVLMNRQPTLHKPGIMAHRARVLRSPAQQTIRMHYANCNTYNADFDGDEMNCHFPQDELSRAEAETIACTDEQYLAPTNGKPLRGLIQDHVGSGVKLTGKDCFLSRADFQHILFCTLSGLPGVEVVPPYGHIYMPAPAIWKPQELWTGKQMISVLLQHLSEGLPPLNLDFKAKTPAVAFGVDQEEHEVVVRGGDLIRGVLDKAAFGASEGGLVHGVYEFYGPRFAGRLLTALGRLFTVYLQFAGHTCGVEDLVLSRAAEQRRRALITRAGRLGGLAMYCYTSGTAFEPPPLPPLPSASGQAEKDGASAD-------GLSAADLARVQARTAELLEEDMRTGQVTQAAAIDNFMRTVLSPVSSDIIKACLPDGLTKPFPHNAFSLMVSTGAKGSTVNQSQISCGLGQQELEGRRVPLMPSGKSLPSFPPYDPSPRAGGFIVDRFLTGVRPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLVKGLEEL------RVHYDNTVRDADAGVVQFLYGEDGVDPLHGKYLDGQAPQMTALARNFAALLCQYKVDLKFLERTGMDLKTARAMHEEIKAARLQIKEQAQKREQKSLSAVR-PAQLKVGNMVLTKRLKRTRT------------EWITGAWLPGWEPAEVVKVHGAKGASRPATYDLRYISDGKVAKRVPRRIRHTVVEPS----RPAASALDIPPXXXXXXASQVDLIRWPYLPDPVLGRAKTQLGLHLGAISERFQDAIEDYLGRDPEHL---FQKSEMGGSKSKAG------------LELLLWLKYMRSLTSPGEAVGSIAGQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVPLCTSISRSEAQRLSARLRRLQLLEVVHHTQGGVLVKERLGRCASSGVTWQRYYTVSLRLHDEEVLQEAFGLSHEEMFEVIATRFVRQLLASVTAELRKVASRDVVRLLKERRGNAADAEARESGEASEDEADMTGLVGGRGPGMKAAARAGAKTSPKLAAMDVDGEEXXXXXXXXXGDEAQGTLSFGRKEERGEYEPDEXXXXXXXXXXXXXXIEEGVENSGEGQLSEVPAKQRRN-----GSRFDDVAAVAKIDHP-FFENLRFERETGVAHITLKTRASHRRLLMVSIVEAAAERCTVRVSKGIAQAFVVE----GKDGRCSIQTEGCNLSELWEV---GDA-ALDLNNITSNDIWAMHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIP 1846
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A024TY59_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TY59_9STRA) HSP 1 Score: 1368 bits (3541), Expect = 0.000e+0 Identity = 852/1930 (44.15%), Postives = 1135/1930 (58.81%), Query Frame = 3 Query: 213 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLED----ELQGFPRARWCGGHNRTVRRQ-MVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKN-------------AESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG-----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGC---EANTDTNGNSSLPEETVEDIRQR-TATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGES--SFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKG-DTGLWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSE---LLDGDDQDEIEXXXXXDEGSVDMEA-ASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRV---LIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 D++++RH V E+ FGF++D++IR LSVK ITS ++FDTL NP+ GGLYDPALGP+D +M+C TC QK CPGH+GHI+L V VY P+LF L +++ KC +CH R + +RV V+++L+D G ++A L L D D N SAN R L++ L G +A + V R ++ AF+K M + KC+NC A SP IR+D K+F PL+ ++ + N++ + SA +G + DDS XXXXXXXXXXXX + AAS+++ A ++++ +EV Q+QLLW+ E + L++ +R V+ G D A +G+R FF++ + V P RFRPP+ MGD EH QNIYL K++ L+E+L N A+S G DLS + W ELQT VNC ID+SK R DV G++Q++EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T+EIG+PLRFAK LT Q V WNV MR LVE G + +PGANFVE+ +G+L+ L + + +R + LL+ ++VWRHLH GD +L+NRQPTLHKP +MAH RVL NP QTIRMHYANCNTYNADFDGDE+N H PQNE+A+AEA +A D QY+VPT G+PLRGLIQDHVD GVK+ +D F T+ Y QLVY A + L G I LPP+I+KP W+GKQVMSTIL HLT G P+LNL+ KA+ A +G EH+++FR+GELLQGVLDKG FGA++YG VHAV+ELYGS A +LLTALGRVLT +LQ AGHTC +EDLTL +AE RR ++ + G+ A E D +A D N +S VE + R T + E + A +D HM + SSDIIKACLP GQ K FP NCFSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVPV++SGKSLPSF+A++P+PRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L V YD+TVR+ EG V QFLYGEDGVD Q +L K QL FLA N+ +L K I F +G DV H I+ AK + TAG + VG + ARR ++ G +W + E W A +++V AG VY +++ D G+ +P +S D+ S S L++ + +PDPV +L +N +G VSE Q + + G+PA L E T PAA ++ F L++WVKYMR L PGE VG+I AQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP +VP+ + A+ + RL+++ L++LL N GI V++ + + LW R YTI L F ++I AF I K+V R+ +F+ LL +K ++R++G L+ V DN E+ A R RK D + E DD QGT+ FG KKE + YG MD++++AI + + DG D + E + + ++ A E+D + + +VR S + G N K E+ ++ ++ + LL+V L E A+ +VRS GI Y V++ + G++ V IQ G +F+ +W+L + VLD+N+L++ND++ + + YGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT +G Y PLNR+GM S Q++FET+ +F+T AA + D + PSAR+V+G+ GTG F L P Sbjct: 6 DQSILRHEVSEVCFGFYSDDEIRDLSVKQITSRISFDTLKNPVLGGLYDPALGPIDFNMICPTCHLTQKECPGHLGHIELPVPVYSPVLFTTLLNILKRKCMSCHKFRRHSANSRVYRVRILLLDNGYVEEAASLLPLL----------------DQKDGNFDESANQTLQRQQAILDEFERLALSGTKKALPRNARSVEVERDAIINAFLKGMTN--KCENCEAHSPSIRQDAHAKIFLKPLSLRSIKHNQSRAVRLSSAFDVLSKYSTGT---------NKDDSXXXXXXXXXXXXXXXXTKN---------------AASAENQGA----NQYLAPLEVMSQLQLLWQHEEGLMELMWG----------NRLVANGRSPDAN-------ASMDGWRKFFLQVIPVAPSRFRPPVIMGDSQFEHSQNIYLSKIITLSEQLVNVSGMRRGHASSTAADSDTGVDLSEKIYLWTELQTQVNCLIDNSKAKRP-DDVPQGIKQLIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSEIGVPLRFAKTLTLPQAVTPWNVVEMRQLVENGPDVHPGANFVENERGQLIDLSKRTHHQRVAIGKTLLTRSASAHGAHQEHKVKRVWRHLHSGDVVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTYNADFDGDEMNMHFPQNELARAEAYTIANNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKDLYIQLVYSAWACLDHER----GGEIDILPPTIVKPTPLWTGKQVMSTILHHLTHGKPKLNLNAKAKIKADLYGPQNAEHVVVFRDGELLQGVLDKGQFGATEYGWVHAVYELYGSGTAAKLLTALGRVLTCYLQYAGHTCALEDLTLTEEAEAERRRLVQHAVVHGEIAYSEFAGLADVAAARKAEADANHDSVRLMNDVERTKIRETMQKRMAEDLEQTSAGLDSHMMGFVHGSSSDIIKACLPHGQNKSFPANCFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPVLVSGKSLPSFEAYDPNPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDL------HVAYDHTVRNAEGTVVQFLYGEDGVDPMQAAFLSGKADQLSFLAMNHASLTHKFGISGEFLENSGLDVVEPAHVHQRIKDAKR-----YGYDRAATTAGLEMHTMKVGLAIQARRLKA-----------GASKWRKGNFELGWHDAVIVQVDDAGDY-PVYDIQYMDTGLTAHAVPEYKRFKAS-----DTISPDVSYLSGTVQLLRPV-------LPDPVMHQLPLNAHIGVVSEKTQLDIEAYAKGNPAGLLESKKTK-------------ALPAAAKSPMMLSPLGFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTVPLLPTTSAAAAQAVEQRLNQVPLAELLRNTKGIRVQDEFKESANRVLWVREYTIRLSFFKAKAIRSAFGISMKEVHRSFGRVFVSRLLTLLKHEIRKSGVALSTSRAV----------------------DNDIETTA-----TTRFRKHDDDNEDDDEA---QGTMRFGAKKEASGYGEMDDDDRAILAQQLNEDDAPRAGATDGSDGSDTENSSDDEVDAAPLKTVAGEIDPVPVTETVRKSPYFAGAGFNSKEQFGELKLRFPANFKTLLLVPLIEKVASHVLVRSCPGISRCYQVKQRL-GRSDVEEQCIQTAGLNFQAIWELDD-----VLDVNRLATNDIYQVLRHYGVEAARASISKQIQDVFGVYGISVDPRHLNLLADYMTHHGDYMPLNRSGMVHKGSSFQQITFETSMKFLTAAATANLGDSMDGPSARLVLGQPVKLGTGSFSLLTP 1783
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: H3H1S7_PHYRM (DNA-directed RNA polymerase subunit n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3H1S7_PHYRM) HSP 1 Score: 1352 bits (3500), Expect = 0.000e+0 Identity = 814/1944 (41.87%), Postives = 1120/1944 (57.61%), Query Frame = 3 Query: 213 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTL------------LGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDP-MEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKL----------------KNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEM--LNEQDGCEANTDTNGNSSLPEETVE-DIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRV--KHAGTTRAVYTLRFEDGVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGA--GSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDME---------AASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNG--KNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 D+T++RH V E+ FGF++D +IR LSVK +TS ++FD+LNNP+ GGLYDPA+GPVD +M+C TC Q QK CPGH+GHI+L V VY P+LFG ++ L++ KCF CH R++ +++RV VK++L+D G +A +L + L RQ D+ + + L S NG K ++L L PR R ++ F+K M + KC+NCGA+SP +R+D K+F L+ +AR+ NR+ N + SA+ + + GN G + +GDDS+ ME + A + DS++ KF+P +EV+ Q+QL+W+ E + LL+ I AS +SG + +G+R FF+ V V P RFRPP+ MGD EH QN +L K++ L E + ++AE +LS L W ELQ VN +DSSK G DVA G++QV+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTY QPV WNV+ MR LV G + +PGANFVE GRL+ L + S +R ++ LL+ ++VWRHL GD +L+NRQPTLHKP IMAH RVL NP QTIRMHYANCNT+NADFDGDE+N H PQNE+A++EA +A D QY+VPT G+PLRGLIQDHVD GVK+ +D F T+ Y QL+Y A + + + I T+ P+I+KP W+GKQV++++LK LT GLP LNLD KA+ +G++ NEH++IFR+GELLQGVLDK FGAS +G+VHA +E+YG+ A LL+ALGR+ T +LQ AGHTC +EDLTLN AE RR+++ S+ +G+ A E L E + ++ +G E IR R T L G D +D HM + +SDIIK CLP GQ KPFP+N FSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVP++ SG+SLPSF+ F+P+PRA G++TDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L+ VGYD+TVR+ +G V QFLYGEDGVD Q+ L K Q DF A N+ ++ KH I F +T D+ + H E+ AK S S G RR + G +W+ +E + AE++ V ++ + Y +++ D LK + + S + + + RV I + + DPV L +N +G +SE Q LR + +P+ E G G + A ++ AF+LL+WV Y+R + +PGE VG +AAQ IGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP ++P+RD V A+ + RL++++LS+L+ + G+ V++ + G LW R Y I L F + I + F + +V +V F+ LL I +++++G ++AK + FS AS + QGTL FG + E YG MDEE++ I K + ++ LD D DE D S D E AA+ ++ L +P SVR + + N K+ +E+ ++ + ++ LLMV L E A + +V+ GI Y++ + + + + +Q EG +F+ +W + +LD+N L++NDV+ + QTYGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT G Y PLNR GM S Q++FET+ +F+++AA+ G D L+SPSAR+V+G+ GTG F L QP Sbjct: 6 DQTILRHEVAEVAFGFYSDAEIRDLSVKQLTSRLSFDSLNNPVMGGLYDPAMGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYSPVLFGQMFNLLKRKCFTCHKFRVASARSRVVRVKILLLDNGFENEAAQLTELLEQRNGVEDEPPQRTLQRQQAILDEYER--LALSKSLSSTNG-KTQLLRPL-------PRLA------EVEREKLATEFLKGMKN--KCENCGAISPALRQDANAKIFLKGLSARARKVNRSKNLTVTSALDT----IRGNVSDGEADPMNGDDSESEMED------------------------DEDKYAMTEDSSS----RSKFLPPLEVQSQLQLMWQNEDGLMELLYGDRHI-----ASGRISG--------------RKPDGWRKFFLNVVPVAPSRFRPPVFMGDKQFEHAQNSHLSKIMTLAESIVQGDYYKRQGATTSDEEDAEKEAQVNLSRKLALWTELQNAVNLLVDSSKAKPGT-DVAQGIKQVIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESENGRLIDLSKRSPHQREAISKTLLTRSASAQGTSKNRVKRVWRHLKTGDVVLMNRQPTLHKPSIMAHTTRVLTNPKMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARSEAYNIASNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKDMYMQLLYNAWASMEDAGVE--KAHIETVAPAILKPEPLWTGKQVITSVLKLLTKGLPPLNLDSKAKIKGDLYGSANNEHVVIFRDGELLQGVLDKSQFGASMHGMVHACYEVYGARIAADLLSALGRLFTCYLQFAGHTCAMEDLTLNKAAEKRRRKLVEDSEVMGEEAYAEFAGLTELLEMKRESEKDGKKRRMNEMERTQIRDRMRTLLSGTDAADNAKALDAHMMGCVHGSNSDIIKTCLPSGQSKPFPKNNFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPILCSGRSLPSFEPFDPAPRAGGYVTDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDLQ------VGYDHTVRNSDGNVVQFLYGEDGVDPVQSAMLSGKDAQFDFQAMNHRSISHKHGINAKFFEKTKLDIMKPLKLHEEVREAKDNDFASTS----------SVLKPGVKAMCRRLKQ-----------GETKWKRGTIELGFHAAEIVAVVEENEDGRESKYDIKYLD------TGLKAFGVPRTTKFKASKPTNTTRAMSGRVDIIKV------SLEDPVMQSLPLNDHVGLISERIQDKLRSYNKRNPSHCLELKKKXXXXXXXXXXHDGDGEIDRDAMQSKHLVTPDAFQLLVWVNYLRSMCSPGECVGILAAQGIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTIPLRDDVDSSRAQEVEQRLNQVALSELINSTNGVRVKDEFHSSENGILWVRDYQIRLTFFQLEEIKRVFGLSADQVFNSVGRGFVGKLLTLISREMKKSGVTVSAK--AESNNFSAPAASXXXXXXXXXXXXXXE-----------------------------QGTLRFGSRGEVQGYGEMDEEDEKIRK---DQMANDDLDNDSDDEASGIN--DMNSSDDEPAENGKKTFAANGMESLEVPNSVRKNPYFVFCGRNEKKNFVELHLRFPTHSKTLLMVPLVEKIAKQVLVQYCPGISRCYLINQRIGEAQEEKPCVQTEGLNFQEIWGFDD-----ILDVNNLATNDVYKVLQTYGVEAARASISKQIMDVFGVYGISVDPRHLSLLADYMTAQGGYMPLNRMGMNYKGSSLQQITFETSMKFLSQAALGGLVDTLESPSARLVLGQPPRVGTGSFSLLQP 1797
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A1V9ZEK2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEK2_9STRA) HSP 1 Score: 1351 bits (3497), Expect = 0.000e+0 Identity = 831/1926 (43.15%), Postives = 1123/1926 (58.31%), Query Frame = 3 Query: 207 SHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDA---LELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLK---NAESLKGED------LSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG-----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCEANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGE---SSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEAASEVDDLT---------LPASVR---NSNAY---KGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMN--GKNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 S D+T++RH V ++ FGF++D++IR LSVK I+S V+FD+L NP+ GGLYDPALGP+D +M+C TC QK CPGH+GHI+L V VY P+LF + +++ KC +CH R S S TR+ V+++L+D G +A LEL D G ++G+ V + ++ L L PR+ R ++ +F+K M KC+NC A SP +R+D K+F PL+ ++++ N++ + SA + + D + DDSD + + AA ++ + ++ +EV QMQLLW+ E L++ N A+ + + +G++ FF+ + V P RFRPP+ MGD EH QNIYL K++ L E++ NA L E+ LS + W ELQT VNC ID+SK R +D+ G++Q++EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T+EIG+PLRFAK LT Q V WNV MR LVE G + +PGANFVE+ +G+L+ L + + +RR + LL+ ++VWRHL GD +L+NRQPTLHKP +MAH RVL NP QTIRMHYANCNT+NADFDGDE+N H PQNE+A++EA +A D QYLVPT G+PLRGLIQDHVD GVK+ +D F T+ Y QLVY A + L G + G I TLPP+I+KP W+GKQVMSTI+ LT G P LNL+ KA+ A +G EH+IIFR+GELLQGVLDK FGAS+YG VHA +ELYGS A +LLTALGRVLT +LQ +GHTC +EDLTLN AE RR ++ QS G+ A E G D + +E IR T + + ++ A +D HM + +S+IIK+CLP GQ K FP NCFSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVPV++SGKSLPSF+ F+PSPRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L V YD+TVR+ +G V QFLYGEDGVDT + +L K Q+ FLA N+ +L K I F ++G DV H +I+ AK + G G+ + G +V ARR + G +W++ E W A + V G VY L ++D G+ V K+P +S + E+ M ++ I + +PDPV L +N +GCVSE Q + + +P++L E S N +G G VS +AF L++WVKYMR L PGE VG+I AQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP ++PV T A + +L+++ L++L+ N GI V+++ ++ + LW R YTI L F + I +AF I K++ RA F+ LL +K ++R++G +++ +NG +M K DN++E A+ AK D QGTL FG +KE A YG MD+++ I KA + D D DE +GS D E +S+ +D+ P +V N N Y GV+ GE+++ + ++ + LL+V L E A++ +VRS GI Y V++ ++ GK IQ +G +FE +W+L VLD+N+L +ND++ + YGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT G Y PLNR+GMA S Q++FET+ +F+T+AA D + PSAR+V+G+ GTG+F L P Sbjct: 4 SMDQTILRHEVSDVCFGFYSDDEIRALSVKQISSRVSFDSLKNPVIGGLYDPALGPIDFNMICPTCHMTQKECPGHLGHIELPVPVYSPVLFATMLNILKRKCMSCHKFRKSASTTRIYRVRLLLLDNGYIDEAAQMLELLDQKDGNF-EEGYEQTVMRQQ-------AILDEYERLALSGTATYLPKNPRSV------EVERDNIINSFLKGM--TYKCENCEAHSPGVRQDSHAKIFLKPLSLRSQRHNQSRAVHLNSAFEMININ---------DKKPAADDSDSE-------------------------ADEDMDAAKDEANTS---NHTYLAPLEVMSQMQLLWQNEEGVTELMWG-------------------NRTAASRRGKNHALDGWKKFFLNVIPVAPSRFRPPVIMGDSQFEHSQNIYLSKIISLAEQMVTMGNARRLAEEEAPQSINLSDKIYLWTELQTQVNCLIDNSKAKRP-EDMPQGIKQLIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSEIGVPLRFAKTLTLPQAVTPWNVIEMRQLVENGPDIHPGANFVENERGQLIDLSKRTLHQRRAIGKTLLTRSASAQGAHQKHKVKRVWRHLKSGDVVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARSEAYNIANNDNQYLVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKDMYLQLVYSAWTCLDGEK-----GVIKTLPPTILKPQPLWTGKQVMSTIVLMLTAGKPSLNLNSKAKIKADLYGPGNAEHIIIFRDGELLQGVLDKAQFGASEYGWVHACYELYGSGTAAKLLTALGRVLTCYLQYSGHTCALEDLTLNEHAEKERRRLVEQSVVQGEIAYSEFA----GLSGLGDKE--RRMNDEERAKIRD-TMQLKMAQDLENTSAALDSHMMGFVHGSNSEIIKSCLPHGQNKSFPANCFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPVLVSGKSLPSFEPFDPSPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDL------HVAYDHTVRNCDGNVVQFLYGEDGVDTINSAFLSGKPDQMSFLAMNHASLTHKFGITAEFLEKSGMDVVEPAKIHHQIKDAKRR----------GYENGDFELHTMKEGLVVLARRLKD-----------GHHKWKKGHFELGWHEAVIKNVDDGGEF-PVYDLTYKDTGLTVYKVPEFKFFKASTSTMP--------ENAYMAGNVQLI----KPQLPDPVMHALQLNNHIGCVSEKTQQHIETYSKANPSNLLE--SKKNKIG-------GVVSS----SAFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASKKMSTPMMTIPVLPTATPAQAVAVEQKLNQVPLAELIRNTKGIRVQDQFLESENRVLWCREYTIRLYFFKPKLIREAFGITTKEIQRAFGKSFVSRLLTLLKHEMRKSGVQVSVENG--SMSVRSK--------------DNIEEEDAEPTRRAKXXXXXXXXXXXD------QGTLKFGSQKEAAGYGEMDDDDVEIQKAQN-------TDDQDMDESAEKSKQADGS-DTENSSDDEDVAPIKVIKGELKPVNVTDTVNKNPYFAGAGVNTTEHYGELKL--RFPANFKTLLLVPLIEKIASQVLVRSCDGISRCYTVKQRLDKSGKEEQCIQTQGLNFEAIWELDH-----VLDVNRLVTNDIYQVLLNYGVEAARASISKQIQDVFGVYGISVDPRHLSLLADYMTHYGDYMPLNRSGMARKGSSFQQITFETSMKFLTQAATGNFGDNMSGPSARLVLGQPVKLGTGLFSLMTP 1754
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: W4FVL2_9STRA (DNA-directed RNA polymerase subunit n=12 Tax=Aphanomyces TaxID=100860 RepID=W4FVL2_9STRA) HSP 1 Score: 1351 bits (3496), Expect = 0.000e+0 Identity = 823/1931 (42.62%), Postives = 1104/1931 (57.17%), Query Frame = 3 Query: 213 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLED----ELQGFPRARWCGGHNRTVRRQ-MVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVE--------DKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLK--------------GEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG-----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLP---GLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQD-----GCEANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGES--SFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFEDGVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELL-DGDDQDEIEXXXXXDEGSVDMEAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN--RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 D++++RH V E+ FGF++D++IR LSVK ITS ++FDTL NP+ GGLYDPALGPVD +M+C TC QK CPGH+GHI+L V VY P+LF L +++ KC +CH R S + +RV V+++L+D G ++A L +Q+ D D N S+ R L++ L G ++ + V R ++ +F+K M + KC+NC A SP +R+D K+F PL+ ++ + N++ + SA S GGS + G++ SD KV ++++ +EV Q+QLLW+ E L L++ +R V+ G D A A +G+R FF++ + V P RFRPP+ MGD + EH QNIYL K++ L+++L N ++ G DLS + W ELQT VNC IDSSK R +V G++Q++EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T+EIG+PL+FAK LT Q V WNV+ MR LVE G + +PGANFVE+ +G+L+ L + + +R + LL+ ++VWRHLH GD +L+NRQPTLHKP +MAH RVL NP QTIRMHYANCNTYNADFDGDE+N H PQNE+A+AEA +A D QY+VPT G+PLRGLIQDHVD GVK+ +D F T+ Y QLVY A + + G EIV LPP+I KP W+GKQVMSTIL LT G P+LNL+ KA+ A +G EH+++FR+GELLQGVLDKG FGA+++G VHAV+ELYGS A +LLTALGRVLT +LQ AGHTC +EDLTL AE RR ++ + G+ A E D EA+ + + ++ IR T + E D A +D HM + SSDIIKACLP GQ K FP NCFSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVPV++SGKSLPSF+A++P+PRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L VGYD+TVR+GEG V QFLYGEDG+D Q +L K QL FLA N+ +L K I F +G D+ H I+ AK + V A+ G S G + ARR ++ G +W++ E W A + V G L + G+ K+P +S + S + Q +R ++ PDPV +L +N +G +SE Q + + +PA L E T +SP F L++WVKYMR L PGE VG+I AQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP +VP+ + A+++ RL+++ LS+L+ N GI V + + T LW R YTI L F ++I AF I K+V R+ +F+ LL +K ++R++G L+ + M DN S R K + DD QGT+ FG KKE + YG MD+E++ I Q + G E D+ + A E+D + + +VR S + G N K E+ ++ ++ + LL+V L E A + +VRS GI Y V++ NG + IQ G +F+ +W+L + VLD+N+L++ND++ + + YGVEA RASI+ +I +VFG YGI VD RHL L+AD+MT +G Y PLNR+GM S Q++FET+ +F+T AA +D + PSAR+V+G+ GTG F L P Sbjct: 6 DQSILRHEVSEVSFGFYSDDEIRDLSVKQITSRISFDTLKNPVLGGLYDPALGPVDFNMICPTCHLTQKECPGHLGHIELPVPVYSPVLFTTLINILKRKCLSCHKFRRSSANSRVFRVRILLLDNGYVEEAASL----------------LQLLDQKDGNFDESSTQTVQRQQAILDEFERLALSGSSKSLPRNARSVEVERDGIIASFLKGMTN--KCENCEAHSPSLRQDSNAKIFLKPLSLRSIKHNQSRAVRLSSAFDS------------------------------LSKFSTKGGGSXXXXXXXXXXDEGII--DSDDEDGDKVTTADHQGGANQYLAPLEVMSQIQLLWKHEEGLLELMWG----------NRLVANGRSPDSA-------APLDGWRKFFLQVIPVAPSRFRPPVIMGDSLFEHAQNIYLAKIITLSDQLVNVSGMRRGATTNDATSDTNSGVDLSEKIYLWTELQTQVNCLIDSSKAKRP-DEVPQGIKQLIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSEIGVPLKFAKTLTLPQAVTPWNVEEMRQLVENGPDIHPGANFVENERGQLIDLSKRTHHQRVAIGKTLLTRSASAHGAHQEHKVKRVWRHLHSGDVVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTYNADFDGDEMNMHFPQNELARAEAYTIANNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKEMYIQLVYSAWACMDHERGAEIV-------VLPPTIWKPTPLWTGKQVMSTILNLLTAGKPKLNLNAKAKIKADLYGPQNAEHVVVFRDGELLQGVLDKGQFGATEFGWVHAVYELYGSGTAAKLLTALGRVLTCYLQYAGHTCALEDLTLTEAAEAERRRLVQHAVVHGEIAYSEFAGLTDVAAARKAEADAKHDSVRLMNDDERAQIRD-TMQKKMAEDLDQTSAGLDSHMMGFVHGSSSDIIKACLPHGQNKSFPANCFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPVLVSGKSLPSFEAYDPNPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDL------HVGYDHTVRNGEGTVVQFLYGEDGIDPMQAAFLSGKPDQLSFLAMNHASLTHKFGISGEFLENSGLDLVEPAHVHQRIKDAKR-----YGYDRVSASVGLEMHSMKAGLTIQARRLKA-----------GASKWKKGSFELGWHTAVIEHVDTTGEYPVYDILYVDTGMTAYKVPQYKRFKASETITPELSYLSGTV-QLLRPIV-----------PDPVMHQLPLNAHIGVISEKTQLEIESYAKTNPAGLLESKKTKALP--VEAQSPMMLSP----LGFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTVPLLATTSPAAAQQVEQRLNQVPLSELIRNVKGIRVTDEFKESATRVLWVREYTIRLSFFKAKAIRSAFGISMKEVHRSFGRVFVSRLLTLLKHEIRKSGVALSVSRTIDNDM------------------DNASPSH------VGRFSKQGNDDNEDDEEA--QGTMRFGAKKEASGYGDMDDEDQQILAQQLDDQPAVATPSGGSDTENSSDDDADDAAPLKPVAGELDPVAVSETVRKSPYFAGAGFNSKEQFGELKLRFPANFKTLLLVPLIEKVANQVLVRSCPGISRCYQVKQRFNGSDVEEQCIQTAGLNFQAIWELDD-----VLDVNRLATNDIYQVLRHYGVEATRASISKQIQDVFGVYGISVDPRHLNLLADYMTHHGDYMPLNRSGMMRKGSSFQQITFETSMKFLTAAATGNLADDMDGPSARLVLGQPVKLGTGSFSLLTP 1789
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A421EWZ9_9STRA (DNA-directed RNA polymerase subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EWZ9_9STRA) HSP 1 Score: 1350 bits (3495), Expect = 0.000e+0 Identity = 804/1943 (41.38%), Postives = 1113/1943 (57.28%), Query Frame = 3 Query: 213 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQ-MVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDP-MEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLK--------GED----------LSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCE-ANTDTNGNSS--LPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHA--GTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNG--AGSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSEL-----------LDGDDQDEIEXXXXXDEGSVDMEAASE-----VDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN--RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 D+T++RH V E+ FGF++D +IR+LSVK +TS ++FD+LNNP+ GGLYDPALGPVD +M+C TC Q QK CPGH+GHI+L V VY P+LF L L++ KCF CH R++ + +RV VK++L+D G T +A +L + L +++G D+ ++ ++ L G R + V+R+ + F+K++ + KC+NCGA+SP +R+D + K+F L+ ++R+ NR+ N + SA+ + + GN G D +GDDS+ ME + A + DST+ KF+P +E++ Q+QL+W+ E + L + R+++ G + +G+R FF+ A+ V P RFRPP+ MGD EH QN +L K++ L+E + + K G+D LS L W ELQT+VN +DSSK G DVA G++QV+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTY QPV WNV+ MR LV G + +PGANFVE GRL+ L + S +R ++ LL+ ++VWRHL GD +L+NRQPTLHKP IMAH RVL NP QTIRMHYANCNT+NADFDGDE+N H PQNE+A+AEA +A D QY+VPT G+PLRGLIQDHVD GVK+ +D F + Y QL+Y A + + ++ I T+PP+I+KP W+GKQV++++LK LT GLP LNLD KA+ +G+ EH++IFR+GELLQGVLDK FGAS YG+VH +E+YG+ A LL+ALGR+ T +LQ GHTC +EDLTLN AE RR+++ S+ +G+ A E + E NG + EE IR R T L G D +D HM + +SDIIK CLP GQ KPFP N FSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVP++ SG+SLPSF+ F+P+PRA G++TDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L+ VGYD+TVR +G V QFLYGEDG+D Q+ L K Q +F A N+ ++ K+ I F +T D+ + H E+ AKA T+ S G V ARR + G +W+ +E + A V+ V Y +++ D G+ +P S A R + +D + DPV L +N +G +SE Q LR + +PA E + A G + +T AF+LL+WV Y+R + APGE VG +AAQ IGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS + TP ++P+RD V A+ + RL++++LS+L+ + GI V++ + G LW R Y I L F ++ I + F + ++V +V F+ LL I +++++G ++A + R G DA NV + XXXX QGTL FG +KE YG MDEE++ I K+ ++ +D + +G + ++ L +P VR + + +N + +E+ ++ + ++ LLMV L E A + +V+ G+ Y++ + + K + +Q EG +F+ +W + +LD+N LS+ND++ + QTYGVEAARA+I+ +IT+VFG YGI VD RHL L+AD+MT G Y PLNR GM S Q+SFET+ +F+ +AA+ G D++ SPSA +V+G+ GTG F L QP Sbjct: 485 DQTILRHEVAEVAFGFYSDAEIRELSVKQLTSRLSFDSLNNPVVGGLYDPALGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFNVLLTLLKRKCFTCHKFRVASASSRVIRVKILLLDNGFTDEAAQLGELLE---QRNGVEDEPPQRTFQRQQAILDE--YERLALSKSNSSTYGKTRLLRPLHRSAEVQREKLATEFLKNVKN--KCENCGAISPAVRQDASAKIFLKALSARSRKVNRSKNLTVTSALDT----IRGNVSDGDDEPVNGDDSESEMED------------------------DEDKYATTEDSTS----RSKFLPPLEIQSQLQLMWQNEDGLMELFYG----------DRNIASGRTTGR---------KPDGWRKFFLNAIPVAPSRFRPPVFMGDKQFEHAQNSHLSKIMALSESIVQGDYYKRQGVTNSDGDDSDAEKEEKVNLSRKLALWTELQTSVNLLVDSSKAKPGT-DVAQGIKQVIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRRLVINGPDVHPGANFVESETGRLIDLSKRSPHQREAISKTLLTRSASAQGTSKNRVKRVWRHLKTGDVVLMNRQPTLHKPSIMAHTTRVLTNPKMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARAEAYNIACNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLNKDMYMQLLYNAWACME--DVGAEKAHIETVPPAILKPEPLWTGKQVVTSVLKMLTKGLPPLNLDSKAKIKGDLYGSENAEHIVIFRDGELLQGVLDKSQFGASMYGMVHGCYEVYGARIAADLLSALGRLFTCYLQFVGHTCAMEDLTLNTPAEKRRRKLVEDSEVMGEEAYAEFAGLTELLENKRASENGGKKRRMNEEERVQIRDRMRTLLSGPDADYNAKALDAHMMGCVHGSNSDIIKTCLPSGQSKPFPANNFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPILCSGRSLPSFEPFDPAPRAGGYVTDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDLQ------VGYDHTVRSSDGSVIQFLYGEDGIDPVQSAMLSGKDAQFNFQAMNHRSISHKYGINAKFFEKTKLDIMKPLKLHEEVREAKANNY----------TSSSSVLKSGVNVMARRLKQ-----------GETKWKRGNIELGFHAATVVAVSEEIEDGLECKYDIQYLDTGLKAFGVPRTTKFKSCKPT------------NATRAMSGRVDI-IKVSFEDPVMQSLPLNDHVGLISENIQDKLRDYNKRNPAKCLELSKRRKSXXXXXXKHAADGEIDRDVMQTKHVVSPDAFQLLVWVNYLRSMCAPGENVGILAAQGIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASAKMSTPMMTIPLRDDVESSRAQEVEQRLNQVALSELIHSTNGIQVKDEFHSSENGILWVRDYHIRLTFFELKEIKRVFGLSAEQVFNSVGKGFVYRLLTLISREMKKSGVTVSAAASTSNL--------RTPAGSDANRKKNV---------------------DXXXXXXXEQGTLRFGSRKEVQGYGEMDEEDEKIRKSQIPNDDLDVDSXXXXXXXXXXQAEDSSSDDEPMHTGKGKKSKKLQKTCLVEGMEPLDVPFGVRKNPYFVFCGHNEEENFVELRLRFPTHSKTLLMVPLVEKVAKQVLVQYCPGVSRCYLINQRIGEKQEEKPCVQTEGLNFQEIWGFDD-----ILDVNNLSTNDIYQVLQTYGVEAARANISKQITDVFGVYGISVDPRHLSLLADYMTAQGGYMPLNRMGMNYKGSSFQQISFETSMKFLAQAAMGGLVDKIDSPSASVVLGQPARVGTGSFSLLQP 2292
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A5D6XPF2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF2_9STRA) HSP 1 Score: 1350 bits (3493), Expect = 0.000e+0 Identity = 814/1967 (41.38%), Postives = 1120/1967 (56.94%), Query Frame = 3 Query: 213 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNE-----------KLKNAESLKGE-------------DLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGC-------EANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRV--KHAGTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLRE------------------GFSTANAVGHFNGAGSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEA----------------ASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN--RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 5843 D+T++R+ V E+ FGF++D +IR+LSVK +TS ++FD LNNP+ GGLYDPALGPVD HM+C TC Q QK CPGH+GHI+L V VY P+LFG + L++ KCF CH R + +++RV VK++L+D+G +A L + L +++G D+ Q ++ ++ L + +G R R + R ++ F K + KC+NCGA+SP +R+D K+F L+ ++R+ANR+ N + SA+ + +SG+ G D D DDS ++ + G AAS D+++ KF+P +EV+ Q+QL+W+ E + LL+ R+V+ G AA +G+R FF+ + V P RFRPP+ +GD EH QN YL K+L L+E KL A + G +L+ L W ELQ VNC +DSS+ G D A G++QV+EKKEGLFRK+MMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTY QPV WNV+ MR LV G + +PGANFVE GRL+ L R S +R ++ LL+ ++VWRHLH GD +L+NRQPTLHKP +MAH RVL NP QTIRMHYANCNT+NADFDGDE+N H PQNE+A+AEA +A D QYLVPT G+PLRGLIQDHVD GVK+ +D F T+ Y QL+Y A + + G + I +PP+I+KP W+GKQV++++LK LT GLP LNLD KA+ +GA+ EH+++FR+GELLQGVLDK FGAS +G VHA +E+YGS A LLT LGR+ T +LQ AGHTC +EDLTL AE RR+++ +S G+ A E D EA + G + E IR+R L G D +D HM + +SDIIK CLP GQ K FP N FSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVP++ SG+SLPS++ F+P+PRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L+ S YD+TVR +G V QFLYGEDGVD + L K + F A N+ ++ K+ I F + D+ + H E A+ A H G S G V ARR ++ G +W+ +E+ + AEVL + ++ + Y +++ D G+ +P + + + +AM ++ + + DPV L +N+ +GCVSE Q LR + + +PA+ + TA G G+ + RT AF+LL+WV Y+R +A PGE VG IAAQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS + TP ++P+ V A + RL++++L++LL N+ G+ VR+ V + G LW R YTI L LF ++ I +AF + V AV FI LL+ I +++++G + A F+G +RG + G D QGTL FG ++E Y MD+E++ + +A + + G D EA A ++ L +P SVR + + N K +E+ ++ + ++ +LMV L E A + +V+ GI Y++ + + +Q EG +F+ +W + +LD+NQL++ND++ + QTYGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT G Y PLNR GM + S Q++FET+ +F+T+AA++G+SD L+SPSARI++G+ GTG F L QP Sbjct: 6 DQTILRYEVAEVAFGFYSDAEIRELSVKQVTSRLSFDALNNPVVGGLYDPALGPVDFHMICPTCHQTQKECPGHLGHIELPVPVYNPVLFGHMLTLLKRKCFTCHKFRSASARSRVLRVKLLLIDSGFDDEAATLAELLE---QRNGVEDEPQQQTFRRQQAILDE--YERLALSQAGAQQRG-QRLRQLARLSEVQREKLAAEFFKGLKA--KCENCGAISPGLRQDAKAKIFLRGLSARSRKANRSKNLTVTSALDTMHGNVSGDERMGSD---DSDDS-----------------------GSESELEDGKFAASEDTSS----RSKFLPPLEVQSQLQLMWKNEDGLMELLYG----------DRNVASGRA----------AAPADGWRKFFLNVIPVAPSRFRPPVFLGDKQFEHAQNSYLSKILTLSENIVQGSYYEQQKLPRAGAEDGXXXXXXXXXTAPQVNLARKLAVWTELQVNVNCLVDSSQAKAGA-DAAQGIKQVIEKKEGLFRKNMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESESGRLIDLKRRSAHQREAISKTLLTRSASAQGTSQHRVKRVWRHLHTGDIVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARAEAYHIAANDHQYLVPTDGSPLRGLIQDHVDSGVKLSQRDTFLTKDLYMQLLYNAWASMEGAGAA--AAHIEVVPPAILKPQALWTGKQVITSVLKMLTKGLPPLNLDSKAKIKGDLYGATNAEHVVVFRDGELLQGVLDKSQFGASMHGFVHACYEVYGSRVAADLLTTLGRLFTCYLQFAGHTCALEDLTLTKDAERRRRKLVDESVLNGEEAYAEFAGLTDLLAAKRSEEEATPGSRGRRRMNETERAQIRERMRALLAGPDADQNAKALDAHMMGTVHGSNSDIIKTCLPAGQTKAFPANGFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPILSSGRSLPSYEPFDPAPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLMKHLEDLQVS------YDHTVRGADGSVVQFLYGEDGVDPLMSAMLSGKDAEFSFQAMNHRSISHKYGIDAQFFERSKLDIMKPLKLHAE-----ARAAQAHGFEQPG-----SLLRAGVRVQARRLKA-----------GETKWKRGNIERGFFAAEVLALAQEYEDPRDSTYDIQYVDTGLKAFNVPRTTVFKARKPT---------NHTRAMSGRVELL----KAERADPVMQSLELNQHVGCVSERIQDKLRAYSERNPANCLDLLRAKKSXXXXXXXXXXXXXKTAEQSGD---DGADEIDREKMRTKHTVSPDAFQLLVWVNYLRSMANPGENVGVIAAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASEKMSTPMMTIPLLAHVPAARAHEVEQRLNQVALAELLSNERGVAVRDEFVPSENGILWVRDYTIRLTLFKLKQIKRAFGLSADDVFGAVGKNFIGKLLSFISREMKKSGVSVAAA-AEATNNFAGS--TRGTNAGX--------------XXXXXXXXXXDE-----------QGTLRFGSRREVQGYE-MDDEDEQLRQAQDDSDXXXXXXARSK-KARGAKRASVGPADEEATGSGAKSKKSGMATALAGGLEALDVPMSVRKNKYFVYCGRNTKAHYVELRLRFPTHSKTVLMVPLVERVAKQVLVQHCPGISRCYLINQRLGDAQDETPCVQTEGLNFQEIWAFDD-----ILDVNQLATNDIFQVLQTYGVEAARASISKQINDVFGVYGISVDPRHLSLLADYMTAYGGYMPLNRMGMNNKGSALQQITFETSMKFLTQAALAGNSDNLESPSARIILGQPPRVGTGSFSLLQP 1833 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig967.17353.1 >prot_H-paniculata_contig967.17353.1 ID=prot_H-paniculata_contig967.17353.1|Name=mRNA_H-paniculata_contig967.17353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1882bp MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLback to top mRNA from alignment at H-paniculata_contig967:2830..25085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig967.17353.1 ID=mRNA_H-paniculata_contig967.17353.1|Name=mRNA_H-paniculata_contig967.17353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=22256bp|location=Sequence derived from alignment at H-paniculata_contig967:2830..25085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig967:2830..25085+ >mRNA_H-paniculata_contig967.17353.1 ID=mRNA_H-paniculata_contig967.17353.1|Name=mRNA_H-paniculata_contig967.17353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=11292bp|location=Sequence derived from alignment at H-paniculata_contig967:2830..25085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |