prot_H-paniculata_contig967.17353.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig967.17353.1
Unique Nameprot_H-paniculata_contig967.17353.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1882
Homology
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE)

HSP 1 Score: 2405 bits (6232), Expect = 0.000e+0
Identity = 1288/1910 (67.43%), Postives = 1492/1910 (78.12%), Query Frame = 0
Query:    1 MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRD-DVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDS--TAAPKVED--KFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTL-QAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLN--EQDGCEANTDTNGNS----SLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSKQLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRF-EDGVVVRKMPLKVMVSSSGGELEDSGSGSDSED--------QAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRT---AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTGLWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQ---ESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEAASEVDD---LTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            MSHDRTVIRHAVEEIGFGF TD+DIRKLSVK ITSPVTFDTLNNPLPGGLYDP LGPVD+ M+C TCGQDQKNCPGH+GHI+LAVSVY P+LFGAL+KL+RAKCF+CHNLRLS+S+TRV AVKMMLVDAGR Q+ALEL+ TLLGYL+ DG +D DV   +T D   LVSA   +DRVLG LE++L   PRA WCGGHNR +RRQ+ E  IK +G CK+C+NCGA SP IRKD +NKLFQVPL++K R AN+  N+ I+SAVQ RDPG      P  D            XXXXXXXXXXX   +G   + +  +   L AA +D+   AA +     +FMP IEVELQMQ LW++E   L+L+F   +         DVSG   +   +   L +    +GYR FF+R +AVPPPRFRPPM+MGD +AEHPQN++L KVL LNE LKNA+SLKG+DL+SVLTTWVELQTTVNC++DSSKDPRG+K+  PGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTY QPVADWNV+AMR LVE G + YPGANFVED+ GR+LHLDRLSDLKRRGVAARLLS PGQKVWRHL DGDCMLVNRQPTLHKPGIMAHRVRVLRNP YQTIRMHYANCNTYNADFDGDEINCHLPQNE+AKAEANLLAFTDEQYLVPT+G PLRGLIQDHVD GVKMCSKDCFFT+GEYQQLVYQALSGLPGLEIVPPS  I TLPP+I+KP QRW+GKQVMSTIL+HLT GLPQLNLDGK+RTP VAFG +E EH+I+FREGELLQGVLDKGAFG+S++GLVHAVHE+YGSTAAG+LLTALGRVLTIFLQS+GHTCGIEDLTL   AE +RRE+I +S GIGQR+M+E+++    +G  A    NG+     +L E  VEDIRQ+TA FLLGE RD RLAEIDRHMQSALAPVSSDIIKACLP GQ KPFP NCFSLMVLTGAKGS VNHSQVSCALGQQALEGRRVPVM+SGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK      VGYDNTVRDGEGCV QFLYGEDG+DTTQTKYL SKQL FLA+NY ALR KH I PSF+++ GFD   A  AH+EI  A A+Q    +    GA+   + FV G+ V A+R+  L         +GG+ W +A L   W  AEV++V+ AGT  A+Y++R+ +DG + ++MPL      S     DS    + E+        +  R L++     G   +PDPV S L+VNKDLGCVSEAFQ SL+ FLD +PASLR   +  ++     GA +G +S    R+   AFELLMWVKYMRCLA PGE VGSIAAQS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTA++NLKTPS  VP+R+G  +  A  LA RLSRL LSQLL N+GGIVVRER+VK +TGLWERHY + L+LF    I  AFDI FK++CR +  +F+P+LL+ I  DLRRTG KL+   G    +       RG+  GD    D+++    +  Q  A AK+  K++AE+ESDD     QGTL FGK+KEQ+SYGGMDEEEKAIWKAMSGK+ +  + G++  + +       G  D     + DD     LP ++  +   KG++ N+K GE+EV V+L SS RRLLMVGLAE+AAAKTMVRS KGIRGA+VV+  + GK+ + +Q+EGS FETVWQLKEGG  G+L+L++L+SND+WA+CQTYGVEAARASI SEIT VFGAYGI VD RHLGLVADHMTF+G YRPLNRAGMADFSSPCLQMSFETT +FM KAAV+ SSDRLKSPSARIV+GRVG +GTGMF+LRQP
Sbjct:    1 MSHDRTVIRHAVEEIGFGFLTDDDIRKLSVKRITSPVTFDTLNNPLPGGLYDPVLGPVDKMMMCATCGQDQKNCPGHMGHIELAVSVYHPILFGALFKLLRAKCFSCHNLRLSKSKTRVAAVKMMLVDAGRAQEALELDATLLGYLK-DGAKDHDVLDGNTEDT--LVSATKHRDRVLGCLEEDLADAPRADWCGGHNRQLRRQLAENLIKAIGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQTCNTQIVSAVQRRDPGK-----PNEDXXXXXXXXXXXXXXXXXXXXXXXDDIAGSAPSSKV-VGVPLAAAQADAGNPAAKRGAQFHEFMPPIEVELQMQQLWKQECSTLDLIFVSDRRTRTVPG--DVSGARSSSSQNVDGLHRGGISDGYRFFFMRVLAVPPPRFRPPMNMGDLIAEHPQNVHLTKVLNLNESLKNADSLKGDDLASVLTTWVELQTTVNCYMDSSKDPRGLKETPPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSIPGQKVWRHLKDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQNELAKAEANLLAFTDEQYLVPTNGKPLRGLIQDHVDAGVKMCSKDCFFTKGEYQQLVYQALSGLPGLEIVPPSDDITTLPPAILKPQQRWTGKQVMSTILRHLTKGLPQLNLDGKSRTPKVAFGEAEQEHVIVFREGELLQGVLDKGAFGSSEFGLVHAVHEVYGSTAAGKLLTALGRVLTIFLQSSGHTCGIEDLTLTAGAEGNRREIIKKSLGIGQRSMRELVDTASAEGQNAKAIANGDEDTGKALVEADVEDIRQKTAFFLLGEDRDTRLAEIDRHMQSALAPVSSDIIKACLPGGQAKPFPHNCFSLMVLTGAKGSMVNHSQVSCALGQQALEGRRVPVMVSGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK------VGYDNTVRDGEGCVHQFLYGEDGIDTTQTKYLSSKQLGFLAQNYQALRHKHGITPSFKNDAGFDCRNASRAHSEI--ATAQQRSDDASGAAGAS--RAKFVAGETVLAKRRTVL---------NGGEGWGKAELLAGWHSAEVMKVRKAGTPAALYSVRYKDDGAMAKRMPLSAPQEGSSENSSDSSPNENGENGHPSSRRRKRPRRLLRKCPGAG---LPDPVLSTLNVNKDLGCVSEAFQKSLQAFLDSNPASLRGDHTNDSSKA---GAATGRLSSPGVRSLKEAFELLMWVKYMRCLANPGETVGSIAAQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTAAKNLKTPSMVVPLREGADRSTARSLARRLSRLPLSQLLDNRGGIVVRERLVKENTGLWERHYVVCLRLFRPSIISMAFDISFKELCRKISGVFVPNLLSAIANDLRRTGNKLSQTGGASVGLPP---RGRGERAGDEE--DDLEGQISAIPQSNAGAKKASKAEAEYESDDEDEE-QGTLKFGKQKEQSSYGGMDEEEKAIWKAMSGKEANGGVLGEEDGDDDGNDDEGMGGADGVGNDKNDDRDYFNLP-NISGARHLKGITKNKKTGEVEVTVRLPSSMRRLLMVGLAESAAAKTMVRSHKGIRGAFVVDMTVEGKSGLAVQLEGSDFETVWQLKEGGVDGILNLDKLTSNDIWAVCQTYGVEAARASIVSEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGSFGTGMFDLRQP 1867          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: D7FNY1_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY1_ECTSI)

HSP 1 Score: 1731 bits (4484), Expect = 0.000e+0
Identity = 897/1264 (70.97%), Postives = 1012/1264 (80.06%), Query Frame = 0
Query:    1 MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRD-DVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLV--AASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQI------------EFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNE--QDGCEANTDTNG----------NSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSKQLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLR 1237
            MSHDRTVIRHAVEEIGFGF TD+DIR+LSVK ITSPVTFDTLNNPLPGGLYDP LGPVD+ M+CETCGQDQKNCPGH+GHI+LAVSVY P+LFGALYKL+RAKCF+CHNLRLS+S+TRV AVKMMLVDAGR Q+ALEL+ TLLGYL+ DG RD DV   +T D   LVSA  ++D VLG LE++L G PRA WCGGHNR +RRQ+ E  IK MG CK+C+NCGA SP IRKD +NKLFQVPL++K R AN++ N+ I+SAVQ RDPG      P  D            XXXXXX       G     +   G++      AA   +T       KFMP IEVELQMQ LW+ E   L+L+F  G+              F  Q + D++GG ++D             GYRLFF+RA+AVPPPRFRPPM+MGD +AEHPQN+YL KVL LNE LKNA SLKG+DL+SVLTTWVELQTTVNC++DSSKDPRG+KD  PGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPY+GTTEIGIPLRFAKELTY QPVADWNV+AMR LVE G + YPGANFVED+ GR+LHLDRLSDLKRRGVAARLLS+PGQKVWRHL DGDCMLVNRQPTLHKPGIMAHRVRVLRNP YQTIRMHYANCNTYNADFDGDEINCHLPQNE+AKAEANLLAFTDEQYLVPT+G PLRGLIQDHVD GVKMCSKDCFFTRGEYQQL+YQALSGLPGLEIVPPS  I TLPP+I+KP QRW+GKQVMSTIL+HLT GLPQLNLDGK+RTP VAFG +E EH+I+FREGELLQGVLDKGAFG+S++GLVHAVHE+YGSTAAG+LLTALGRVLTIFLQS+GHTCGIEDLTL  +AE +RRE+I++S GIGQR+M+E++     +G +A    NG          + +L E  VE IRQ+TA+FLLGE RD RLAEIDRHMQSALAPVSSDIIKACLP GQ KPFP NCFSLMVLTGAKGS VNHSQVSCALGQQALEGRRVPVM+SGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK      VGYDNTVRDGEGCV QFLYGEDGVDTTQTKYL SKQL FLA+NY ALR KH I PSF+ ++GFD   A  AH+EI +   ++    + P        + FV G++V A+R+  L           G+ W +A L   W  AEV++V++AGT  A+Y++R
Sbjct:    1 MSHDRTVIRHAVEEIGFGFLTDDDIRRLSVKRITSPVTFDTLNNPLPGGLYDPVLGPVDKMMMCETCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKMMLVDAGRAQEALELDATLLGYLK-DGARDHDVLDGNTEDT--LVSATKYRDHVLGCLEEDLAGAPRAEWCGGHNRQLRRQLAENLIKAMGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQSCNTQIVSAVQRRDPGK-----PNEDXXXXXXXXXXXXXXXXXXNLEDDDVGGSAPSSKVVGVSLAAAQAAAGDPATKTGAQAHKFMPPIEVELQMQQLWKLESSVLDLIFVSGRRTRSAPGDVNGPPSFSLQNANDLAGGSISD-------------GYRLFFVRALAVPPPRFRPPMNMGDMIAEHPQNVYLTKVLNLNESLKNAASLKGKDLASVLTTWVELQTTVNCYMDSSKDPRGLKDTPPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQNELAKAEANLLAFTDEQYLVPTNGKPLRGLIQDHVDAGVKMCSKDCFFTRGEYQQLLYQALSGLPGLEIVPPSDDITTLPPAILKPQQRWTGKQVMSTILRHLTKGLPQLNLDGKSRTPKVAFGEAEQEHVIVFREGELLQGVLDKGAFGSSEFGLVHAVHEVYGSTAAGKLLTALGRVLTIFLQSSGHTCGIEDLTLTGRAEGNRREIINKSLGIGQRSMRELVETVAAEGQDAKAIANGAAAEEGHEDTSKALVEAEVESIRQKTASFLLGEDRDTRLAEIDRHMQSALAPVSSDIIKACLPGGQAKPFPHNCFSLMVLTGAKGSMVNHSQVSCALGQQALEGRRVPVMVSGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELK------VGYDNTVRDGEGCVHQFLYGEDGVDTTQTKYLSSKQLGFLAQNYQALRHKHGITPSFKKDSGFDSRDASRAHSEIATCLQRRDDAAANPSSSC----AKFVAGEMVLAKRRAVL---------KRGEGWGKAELLAGWHSAEVVKVRNAGTPAALYSVR 1224          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA)

HSP 1 Score: 1667 bits (4317), Expect = 0.000e+0
Identity = 972/1898 (51.21%), Postives = 1189/1898 (62.64%), Query Frame = 0
Query:    1 MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQS-RDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIE-FLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPR-GMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCEANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTT------RAVYTLRFE-DGVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRV-LIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGG-IVVRERIVKGDTGLWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEI-EXXXXXDEGS---VDMEAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            MSHDR VIRH VEE+ FGF + ++IR +SVK ITSP+TFD LNNPLPGGLYDPALGP  +  VC TCGQD  +CPGH+GHI+LA  VY PLLF  L+KL++ KCF+CH LR++    R+ AVKM L DAG T  A  L+  + G    +   D+   D  PD    +SA      +L                       RRQ+ +  IK +G CKKCQNCGA SP +RKD   KLF  PL++K ++AN  V + + SA+Q+ +D   + N          G+DSD   XXXXXXXXXXX                                D+++  +E + QMQLLW KE   L+LLF        L  A + V+G                 +G+RLFF++ +AVPPPRFRPPM M D VAEHPQN YL K                                +NCFIDSSKD     KD APGLRQ+LEKKEGLFRKHMMGKRVN++CRSVISPDPY+GTTEIGIP RFAK L + QPVA WNV+ +R LVE GA+ YPGAN++EDA G+L++L R S ++R+G+AARLLS PGQKVWRHL D D MLVNRQPTLHKPGIMAH  R+LRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVA+AEAN+LAFT+EQYLVPT G PLRGLIQD VD GVK+CSK  + TR ++QQL++Q         I  P   I T  P+I+KP Q WSGKQV S IL+HLT GLPQLNLD K +TPAVAFG    EH ++ REGELLQGVLDK AFGA+++GLVH+VHELYG+ AAG LLT+LGRVL  FLQ AGHTCGIEDLTL   AE  RR +I                                        IR +TA  L G     +   +D  M S L+ V+SDIIKACLP GQEKPFP N FSLMVLTGAKGS VNHSQVSC LGQQALEGRRVP+MISGKSLPSFQAF+ +PRANGFITDRFLTGIRPQ+YYFHCMAGREGLVDTAVKTSRSGYLQRCL+KHLEELK      V YD TVRDG+G V QF+YGEDG+D TQ+K++     QL+F+ARNY A+  K+ +      +  F+V +A  AH  +  A+ K                + F VG  V ARR R            G + W    L K W  A +++V HA ++      R  YTLR+  DG+  RK+PL + + ++   L            A RV LI+           DPV S L+VN+DLG VSE F + L  F+               A  H  G  SG    AA R  F ++MWVKYMR LAAPGEAVG+IA QS+GEPSTQMTLNTFHLAGHGGANVTLGIPRLREI+MTASR LKTP+ +VP+  GV++   E LA  L+RL L +LL N GG + VRE++ KGDTGLWERHY I L+LFP + I+KAF + FK++CRA+   F+P LL  +  +LRR GE   A++   A+                            K              +S D    GQGTL FG+KKEQASYG MD++EK +WKAM GK    L   DD D+  +      +G    +D +    +D L L   V+N+  +  +  N+    + V +K  +S RRLLMVG+AEAAAA ++VRS   I  +++VE+++ G+NR+ +Q EG+ F T+W L     G +LDL QL+SN ++ M  +YGVEA RA+IT EI  VF  YGI VD RHLGL+AD+MTF G YR +NR GM D +SP LQMSFETTA F+ +AA+    ++LKSPSARIV+G+VGD+GTG F+L  P
Sbjct:    1 MSHDRQVIRHKVEEVKFGFLSGDEIRAISVKQITSPLTFDALNNPLPGGLYDPALGPSQQRAVCPTCGQDHLSCPGHVGHIELAAEVYHPLLFPILFKLLKTKCFSCHKLRMNSQTCRIYAVKMALCDAGETNMARSLDAEIAGG-GAEANTDEGDEDLLPDKAETISA------IL----------------------ARRQIADDVIKAIGACKKCQNCGAFSPVLRKDGHTKLFLKPLSDKMQKANNLVAAKMGSAMQAIKDKAAAAN--------QPGNDSDXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXDEHDQYVSPLEAQAQMQLLWEKEGHLLSLLFKTSMPPPKLLSAPQPVAG--------------YDPQGFRLFFMKTIAVPPPRFRPPMVMADMVAEHPQNQYLTK------------------------------NQINCFIDSSKDTSVNAKDAAPGLRQILEKKEGLFRKHMMGKRVNHSCRSVISPDPYIGTTEIGIPERFAKVLCFPQPVAAWNVEHLRTLVENGADFYPGANYIEDAAGKLINLRRQSAVQRKGMAARLLSEPGQKVWRHLQDRDAMLVNRQPTLHKPGIMAHHARILRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVARAEANVLAFTNEQYLVPTDGKPLRGLIQDSVDAGVKLCSKSTWLTREDFQQLMFQ---------ITGPGTPIRTPQPAILKPKQLWSGKQVFSCILQHLTAGLPQLNLDAKTKTPAVAFGEQWQEHRVVIREGELLQGVLDKAAFGATEFGLVHSVHELYGADAAGSLLTSLGRVLVTFLQFAGHTCGIEDLTLTQSAEKERRRLIGT--------------------------------------IRAKTAEMLAGNDMASQAGALDGFMMSELSGVASDIIKACLPGGQEKPFPSNNFSLMVLTGAKGSMVNHSQVSCGLGQQALEGRRVPIMISGKSLPSFQAFDSNPRANGFITDRFLTGIRPQDYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEELK------VEYDGTVRDGDGGVFQFMYGEDGIDATQSKFMSGAKPQLEFMARNYRAIVHKYDLDQGILDK--FNVEKAVEAHDAVSYAQGKD-------------DGALFEVGQSVSARRLRK-----------GREDWCRENLRKGWFTATIVKV-HASSSDAASPERTKYTLRYAADGMEARKVPLTIKLPTAADTLG-----------ASRVPLIQRCS-------ADPVLSTLNVNQDLGAVSERFHARLEAFMA--------------AESHRRGLLSGRRGAAA-RDDFTVMMWVKYMRSLAAPGEAVGAIAGQSVGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIVMTASRALKTPAATVPLLRGVSRAQGEALARLLTRLPLLELLLNTGGGVTVREKLGKGDTGLWERHYVIALRLFPAKKILKAFSLTFKQLCRAISQTFVPRLLRLVATELRRCGELAAARSKKSAVS---------------------------KAKXXXXXXXXXXXXDSGDEE--GQGTLKFGRKKEQASYGDMDDDEKEMWKAMKGKGGDPLNSDDDGDDASDDGRSRGDGQTTQLDGDEQDGLDFLDLSTGVKNNQMFGRMDFNKASNTVTVTLKFPASVRRLLMVGIAEAAAATSVVRSHGKIGRSFLVEQLIGGENRMALQTEGADFATLWALGPREGGTLLDLPQLASNHIYGMLMSYGVEACRAAITKEIAAVFAVYGIGVDARHLGLIADYMTFYGGYRAMNRIGMKDIASPFLQMSFETTASFLVQAALDSKVEKLKSPSARIVMGQVGDFGTGQFDLMVP 1658          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC)

HSP 1 Score: 1429 bits (3700), Expect = 0.000e+0
Identity = 864/1956 (44.17%), Postives = 1170/1956 (59.82%), Query Frame = 0
Query:    4 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQA--NRAVNSDILSAV----QSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGD-FVAEHPQNIYLQKVLGLNEKLK-------------NAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPR---GMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLN-------------------EQDGCEANTDTNGNSSLPEETVEDIRQRTATFL---LGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAK---QAMCHSGPPVGATAGESSFVVGDIVFARR-KRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHA-GTTR-AVYTLRF-EDGVVVRKMPLKV---MVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPV--QSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFN-KGGIVVRERIVK-GDTGL-WERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEK-----LTAKNGVGAMMFSGKNASRGQDGGDATA-----ADNVQESFAQKMATAKRVRKSDAEFESDDXXXX------GQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN-RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            +R V+RH V E+ FG + +E+I +LSV  +++  T+D L NPLPGGLYDPA+GP+D   +C TC    ++CPGH+GH  L++ VY PL FG +++ +R KCF CH  RLS     V A+K+ L+DAG   +A  L+  L    R D  R  +  D              + R+  +L+   Q  P++ W  G  +  RR +++ F++++  CK C  C A    +RKD   K F      + R+A  +R   + I SA+      R     GNG         GDDSD  E              S          +    AA    T A   E  +M   EV++ M+LLW  E     L++    +E    ++     G              + +G++  F R + V P RFRPP    D  +AEHPQN  + K++ L+E+++               E+L  E LS VL+TW++LQ  VN +IDSSKD     G  ++ PG+RQ LEKKEGLFR HMMGKRVN+ACRSVISPDPY+GT+EIG+PLRFAK LTY+QPV  +N   +R  VE GA  +PGAN+VEDA+GRL+ L R+   +RR +AARLL+ PGQ VWRHL DGD +L+NRQPTLHKPGIMAHR RVLR+P  QTIRMHYANCNTYNADFDGDE+NCH PQ+E+++AEA  +A TDEQYL PT+G PLRGLIQDHV  GVK+  KDCF +R ++Q +++  LSGLPG+E+VPP G I+   P+I KP + W+GKQ++S +L+HL+ GLP LNLD KA+TPAVAFG  + EH ++ R G+L++GVLDK AFGAS+ GLVH V+E YG   AG+LLTALGR+ T++LQ AGHTCG+EDL L+  AE  RR +I+++  +G  AM    +                   E+DG  A+        L    +  ++ RTA  L   +  G+  + A ID  M++ L+PVSSDIIKACLPDG  KPFP N FSLMV TGAKGS VN SQ+SC LGQQ LEGRRVP+M SGKSLPSF  ++PSPRA GFI DRFLTG+RPQEYYFHCMAGREGL+DTAVKTSRSGYLQRCLVK LEEL      RV YDNTVRD +  V QFLYGEDGVD    KYL  +  Q+  LARN+ AL  ++ +   F   TG D+  A+  H EI++A+ +   QA       + A    +   VG++V  +R KR+               W        W+ AEV++V  A G +R A Y LR+  DG V +++P ++   +V  S      + S  D            +D      +PDPV  +++  +   LG +SE FQ ++  +L  DP  L   F  +   G  + AG             ELL+W+KYMR L +PGEAVGSIA QSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRN KTPS +VP+   +++ +A+RL+ RL RL L +++ + +GG++V+ER+ +   +G+ W+R+YT++L+L     + +AF +  +++   + T F+  LLA + A+LR+   +     L  + G  A   + ++    +D  D T         ++ +      T+ ++   D + E   XXXX       QGTL+FG+K+E+  Y   +                E ++   + ++         +      S  DD+   A + +   ++ +   R+ G   + +K  +S+RRLLMV + EAAA +  VR  KGI  A+VVE    GK+ R  IQ EG +   +W++   GD   LDLN ++SND+WAM QTYGVEAARA+I  EI  VFGAYGI VD RHLGLVAD MT+ G +R LNR GM++ SSP LQMSFETTA F+T+AA++   D L++PSA++V+G+    GTG F++  P
Sbjct:   11 ERCVVRHDVSEVQFGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALF---RADLHRSTILRD-------------TEMRLRRHLQTAGQ-VPKS-WIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTVRKDGYTKFFV-----RGRRAGHSRGAGAHIPSALAVVRNGRHEVECGNGF--------GDDSDGEE--------------SEXXXXXXXXASQERFAARGGDTEAEGGE--YMAPAEVQMHMKLLWEAEPELATLIWGKAAVEKSVFSAPGADTG--------------RADGWKTLFWRVLPVTPSRFRPPSKNDDGSLAEHPQNYNVIKIMNLDERIRALLRKEDGGEGATGPENLPAEALSRVLSTWIDLQNAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQTVWRHLQDGDMVLMNRQPTLHKPGIMAHRARVLRSPAQQTIRMHYANCNTYNADFDGDEMNCHFPQDELSRAEAETIACTDEQYLAPTNGKPLRGLIQDHVGSGVKLTGKDCFLSRADFQHILFCTLSGLPGVEVVPPYGHIYMPAPAIWKPQELWTGKQMISVLLQHLSEGLPPLNLDFKAKTPAVAFGVDQEEHEVVVRGGDLIRGVLDKAAFGASEGGLVHGVYEFYGPRFAGRLLTALGRLFTVYLQFAGHTCGVEDLVLSRAAEQRRRALITRAGRLGGLAMYCYTSGTAFEPPPLPPLPSASGQAEKDGASAD-------GLSAADLARVQARTAELLEEDMRTGQVTQAAAIDNFMRTVLSPVSSDIIKACLPDGLTKPFPHNAFSLMVSTGAKGSTVNQSQISCGLGQQELEGRRVPLMPSGKSLPSFPPYDPSPRAGGFIVDRFLTGVRPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLVKGLEEL------RVHYDNTVRDADAGVVQFLYGEDGVDPLHGKYLDGQAPQMTALARNFAALLCQYKVDLKFLERTGMDLKTARAMHEEIKAARLQIKEQAQKREQKSLSAVR-PAQLKVGNMVLTKRLKRTRT------------EWITGAWLPGWEPAEVVKVHGAKGASRPATYDLRYISDGKVAKRVPRRIRHTVVEPS----RPAASALDIPPXXXXXXASQVDLIRWPYLPDPVLGRAKTQLGLHLGAISERFQDAIEDYLGRDPEHL---FQKSEMGGSKSKAG------------LELLLWLKYMRSLTSPGEAVGSIAGQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVPLCTSISRSEAQRLSARLRRLQLLEVVHHTQGGVLVKERLGRCASSGVTWQRYYTVSLRLHDEEVLQEAFGLSHEEMFEVIATRFVRQLLASVTAELRKVASRDVVRLLKERRGNAADAEARESGEASEDEADMTGLVGGRGPGMKAAARAGAKTSPKLAAMDVDGEEXXXXXXXXXGDEAQGTLSFGRKEERGEYEPDEXXXXXXXXXXXXXXIEEGVENSGEGQLSEVPAKQRRN-----GSRFDDVAAVAKIDHP-FFENLRFERETGVAHITLKTRASHRRLLMVSIVEAAAERCTVRVSKGIAQAFVVE----GKDGRCSIQTEGCNLSELWEV---GDA-ALDLNNITSNDIWAMHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIP 1846          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A024TY59_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TY59_9STRA)

HSP 1 Score: 1368 bits (3540), Expect = 0.000e+0
Identity = 852/1930 (44.15%), Postives = 1135/1930 (58.81%), Query Frame = 0
Query:    4 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLED----ELQGFPRARWCGGHNRTVRRQ-MVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKN-------------AESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG-----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGC---EANTDTNGNSSLPEETVEDIRQR-TATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGES--SFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKG-DTGLWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSE---LLDGDDQDEIEXXXXXDEGSVDMEA-ASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRV---LIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            D++++RH V E+ FGF++D++IR LSVK ITS ++FDTL NP+ GGLYDPALGP+D +M+C TC   QK CPGH+GHI+L V VY P+LF  L  +++ KC +CH  R   + +RV  V+++L+D G  ++A  L   L                D  D N   SAN    R    L++     L G  +A      +  V R  ++ AF+K M +  KC+NC A SP IR+D   K+F  PL+ ++ + N++    + SA        +G          + DDS    XXXXXXXXXXXX  +               AAS+++  A    ++++  +EV  Q+QLLW+ E   + L++           +R V+ G   D         A  +G+R FF++ + V P RFRPP+ MGD   EH QNIYL K++ L+E+L N             A+S  G DLS  +  W ELQT VNC ID+SK  R   DV  G++Q++EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T+EIG+PLRFAK LT  Q V  WNV  MR LVE G + +PGANFVE+ +G+L+ L + +  +R  +   LL+              ++VWRHLH GD +L+NRQPTLHKP +MAH  RVL NP  QTIRMHYANCNTYNADFDGDE+N H PQNE+A+AEA  +A  D QY+VPT G+PLRGLIQDHVD GVK+  +D F T+  Y QLVY A + L         G I  LPP+I+KP   W+GKQVMSTIL HLT G P+LNL+ KA+  A  +G    EH+++FR+GELLQGVLDKG FGA++YG VHAV+ELYGS  A +LLTALGRVLT +LQ AGHTC +EDLTL  +AE  RR ++  +   G+ A  E     D     +A  D N +S      VE  + R T    + E  +   A +D HM   +   SSDIIKACLP GQ K FP NCFSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVPV++SGKSLPSF+A++P+PRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L       V YD+TVR+ EG V QFLYGEDGVD  Q  +L  K  QL FLA N+ +L  K  I   F   +G DV      H  I+ AK      +       TAG    +  VG  + ARR ++           G  +W +   E  W  A +++V  AG    VY +++ D G+    +P      +S     D+ S   S       L++ +       +PDPV  +L +N  +G VSE  Q  +  +  G+PA L E   T                PAA ++        F L++WVKYMR L  PGE VG+I AQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP  +VP+    +   A+ +  RL+++ L++LL N  GI V++   +  +  LW R YTI L  F  ++I  AF I  K+V R+   +F+  LL  +K ++R++G  L+    V                      DN  E+ A       R RK D + E DD     QGT+ FG KKE + YG MD++++AI      +  +      DG D  + E     +  +  ++  A E+D + +  +VR S  + G   N K    E+ ++  ++ + LL+V L E  A+  +VRS  GI   Y V++ + G++ V    IQ  G +F+ +W+L +     VLD+N+L++ND++ + + YGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT +G Y PLNR+GM    S   Q++FET+ +F+T AA +   D +  PSAR+V+G+    GTG F L  P
Sbjct:    6 DQSILRHEVSEVCFGFYSDDEIRDLSVKQITSRISFDTLKNPVLGGLYDPALGPIDFNMICPTCHLTQKECPGHLGHIELPVPVYSPVLFTTLLNILKRKCMSCHKFRRHSANSRVYRVRILLLDNGYVEEAASLLPLL----------------DQKDGNFDESANQTLQRQQAILDEFERLALSGTKKALPRNARSVEVERDAIINAFLKGMTN--KCENCEAHSPSIRQDAHAKIFLKPLSLRSIKHNQSRAVRLSSAFDVLSKYSTGT---------NKDDSXXXXXXXXXXXXXXXXTKN---------------AASAENQGA----NQYLAPLEVMSQLQLLWQHEEGLMELMWG----------NRLVANGRSPDAN-------ASMDGWRKFFLQVIPVAPSRFRPPVIMGDSQFEHSQNIYLSKIITLSEQLVNVSGMRRGHASSTAADSDTGVDLSEKIYLWTELQTQVNCLIDNSKAKRP-DDVPQGIKQLIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSEIGVPLRFAKTLTLPQAVTPWNVVEMRQLVENGPDVHPGANFVENERGQLIDLSKRTHHQRVAIGKTLLTRSASAHGAHQEHKVKRVWRHLHSGDVVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTYNADFDGDEMNMHFPQNELARAEAYTIANNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKDLYIQLVYSAWACLDHER----GGEIDILPPTIVKPTPLWTGKQVMSTILHHLTHGKPKLNLNAKAKIKADLYGPQNAEHVVVFRDGELLQGVLDKGQFGATEYGWVHAVYELYGSGTAAKLLTALGRVLTCYLQYAGHTCALEDLTLTEEAEAERRRLVQHAVVHGEIAYSEFAGLADVAAARKAEADANHDSVRLMNDVERTKIRETMQKRMAEDLEQTSAGLDSHMMGFVHGSSSDIIKACLPHGQNKSFPANCFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPVLVSGKSLPSFEAYDPNPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDL------HVAYDHTVRNAEGTVVQFLYGEDGVDPMQAAFLSGKADQLSFLAMNHASLTHKFGISGEFLENSGLDVVEPAHVHQRIKDAKR-----YGYDRAATTAGLEMHTMKVGLAIQARRLKA-----------GASKWRKGNFELGWHDAVIVQVDDAGDY-PVYDIQYMDTGLTAHAVPEYKRFKAS-----DTISPDVSYLSGTVQLLRPV-------LPDPVMHQLPLNAHIGVVSEKTQLDIEAYAKGNPAGLLESKKTK-------------ALPAAAKSPMMLSPLGFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTVPLLPTTSAAAAQAVEQRLNQVPLAELLRNTKGIRVQDEFKESANRVLWVREYTIRLSFFKAKAIRSAFGISMKEVHRSFGRVFVSRLLTLLKHEIRKSGVALSTSRAV----------------------DNDIETTA-----TTRFRKHDDDNEDDDEA---QGTMRFGAKKEASGYGEMDDDDRAILAQQLNEDDAPRAGATDGSDGSDTENSSDDEVDAAPLKTVAGEIDPVPVTETVRKSPYFAGAGFNSKEQFGELKLRFPANFKTLLLVPLIEKVASHVLVRSCPGISRCYQVKQRL-GRSDVEEQCIQTAGLNFQAIWELDD-----VLDVNRLATNDIYQVLRHYGVEAARASISKQIQDVFGVYGISVDPRHLNLLADYMTHHGDYMPLNRSGMVHKGSSFQQITFETSMKFLTAAATANLGDSMDGPSARLVLGQPVKLGTGSFSLLTP 1783          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: H3H1S7_PHYRM (DNA-directed RNA polymerase subunit n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3H1S7_PHYRM)

HSP 1 Score: 1352 bits (3499), Expect = 0.000e+0
Identity = 814/1944 (41.87%), Postives = 1120/1944 (57.61%), Query Frame = 0
Query:    4 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTL------------LGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDP-MEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKL----------------KNAESLKGEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEM--LNEQDGCEANTDTNGNSSLPEETVE-DIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRV--KHAGTTRAVYTLRFEDGVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGA--GSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDME---------AASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNG--KNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            D+T++RH V E+ FGF++D +IR LSVK +TS ++FD+LNNP+ GGLYDPA+GPVD +M+C TC Q QK CPGH+GHI+L V VY P+LFG ++ L++ KCF CH  R++ +++RV  VK++L+D G   +A +L + L                RQ    D+ +      +  L S NG K ++L  L       PR           R ++   F+K M +  KC+NCGA+SP +R+D   K+F   L+ +AR+ NR+ N  + SA+ +    + GN   G  +  +GDDS+  ME                         +    A + DS++      KF+P +EV+ Q+QL+W+ E   + LL+    I     AS  +SG               + +G+R FF+  V V P RFRPP+ MGD   EH QN +L K++ L E +                ++AE     +LS  L  W ELQ  VN  +DSSK   G  DVA G++QV+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTY QPV  WNV+ MR LV  G + +PGANFVE   GRL+ L + S  +R  ++  LL+             ++VWRHL  GD +L+NRQPTLHKP IMAH  RVL NP  QTIRMHYANCNT+NADFDGDE+N H PQNE+A++EA  +A  D QY+VPT G+PLRGLIQDHVD GVK+  +D F T+  Y QL+Y A + +    +      I T+ P+I+KP   W+GKQV++++LK LT GLP LNLD KA+     +G++ NEH++IFR+GELLQGVLDK  FGAS +G+VHA +E+YG+  A  LL+ALGR+ T +LQ AGHTC +EDLTLN  AE  RR+++  S+ +G+ A  E   L E    +  ++ +G      E     IR R  T L G    D    +D HM   +   +SDIIK CLP GQ KPFP+N FSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVP++ SG+SLPSF+ F+P+PRA G++TDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L+      VGYD+TVR+ +G V QFLYGEDGVD  Q+  L  K  Q DF A N+ ++  KH I   F  +T  D+ +    H E+  AK       S          S    G     RR +            G  +W+   +E  +  AE++ V  ++     + Y +++ D        LK        + + S   + +   + RV I  +       + DPV   L +N  +G +SE  Q  LR +   +P+   E                G G +   A ++       AF+LL+WV Y+R + +PGE VG +AAQ IGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP  ++P+RD V    A+ +  RL++++LS+L+ +  G+ V++     + G LW R Y I L  F +  I + F +   +V  +V   F+  LL  I  +++++G  ++AK    +  FS   AS              +                             QGTL FG + E   YG MDEE++ I K    +  ++ LD D  DE       D  S D E         AA+ ++ L +P SVR +  +     N K+  +E+ ++  + ++ LLMV L E  A + +V+   GI   Y++ + +    + +  +Q EG +F+ +W   +     +LD+N L++NDV+ + QTYGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT  G Y PLNR GM    S   Q++FET+ +F+++AA+ G  D L+SPSAR+V+G+    GTG F L QP
Sbjct:    6 DQTILRHEVAEVAFGFYSDAEIRDLSVKQLTSRLSFDSLNNPVMGGLYDPAMGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYSPVLFGQMFNLLKRKCFTCHKFRVASARSRVVRVKILLLDNGFENEAAQLTELLEQRNGVEDEPPQRTLQRQQAILDEYER--LALSKSLSSTNG-KTQLLRPL-------PRLA------EVEREKLATEFLKGMKN--KCENCGAISPALRQDANAKIFLKGLSARARKVNRSKNLTVTSALDT----IRGNVSDGEADPMNGDDSESEMED------------------------DEDKYAMTEDSSS----RSKFLPPLEVQSQLQLMWQNEDGLMELLYGDRHI-----ASGRISG--------------RKPDGWRKFFLNVVPVAPSRFRPPVFMGDKQFEHAQNSHLSKIMTLAESIVQGDYYKRQGATTSDEEDAEKEAQVNLSRKLALWTELQNAVNLLVDSSKAKPGT-DVAQGIKQVIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESENGRLIDLSKRSPHQREAISKTLLTRSASAQGTSKNRVKRVWRHLKTGDVVLMNRQPTLHKPSIMAHTTRVLTNPKMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARSEAYNIASNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKDMYMQLLYNAWASMEDAGVE--KAHIETVAPAILKPEPLWTGKQVITSVLKLLTKGLPPLNLDSKAKIKGDLYGSANNEHVVIFRDGELLQGVLDKSQFGASMHGMVHACYEVYGARIAADLLSALGRLFTCYLQFAGHTCAMEDLTLNKAAEKRRRKLVEDSEVMGEEAYAEFAGLTELLEMKRESEKDGKKRRMNEMERTQIRDRMRTLLSGTDAADNAKALDAHMMGCVHGSNSDIIKTCLPSGQSKPFPKNNFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPILCSGRSLPSFEPFDPAPRAGGYVTDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDLQ------VGYDHTVRNSDGNVVQFLYGEDGVDPVQSAMLSGKDAQFDFQAMNHRSISHKHGINAKFFEKTKLDIMKPLKLHEEVREAKDNDFASTS----------SVLKPGVKAMCRRLKQ-----------GETKWKRGTIELGFHAAEIVAVVEENEDGRESKYDIKYLD------TGLKAFGVPRTTKFKASKPTNTTRAMSGRVDIIKV------SLEDPVMQSLPLNDHVGLISERIQDKLRSYNKRNPSHCLELKKKXXXXXXXXXXHDGDGEIDRDAMQSKHLVTPDAFQLLVWVNYLRSMCSPGECVGILAAQGIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTIPLRDDVDSSRAQEVEQRLNQVALSELINSTNGVRVKDEFHSSENGILWVRDYQIRLTFFQLEEIKRVFGLSADQVFNSVGRGFVGKLLTLISREMKKSGVTVSAK--AESNNFSAPAASXXXXXXXXXXXXXXE-----------------------------QGTLRFGSRGEVQGYGEMDEEDEKIRK---DQMANDDLDNDSDDEASGIN--DMNSSDDEPAENGKKTFAANGMESLEVPNSVRKNPYFVFCGRNEKKNFVELHLRFPTHSKTLLMVPLVEKIAKQVLVQYCPGISRCYLINQRIGEAQEEKPCVQTEGLNFQEIWGFDD-----ILDVNNLATNDVYKVLQTYGVEAARASISKQIMDVFGVYGISVDPRHLSLLADYMTAQGGYMPLNRMGMNYKGSSLQQITFETSMKFLSQAALGGLVDTLESPSARLVLGQPPRVGTGSFSLLQP 1797          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A1V9ZEK2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEK2_9STRA)

HSP 1 Score: 1351 bits (3496), Expect = 0.000e+0
Identity = 831/1926 (43.15%), Postives = 1123/1926 (58.31%), Query Frame = 0
Query:    2 SHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDA---LELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLK---NAESLKGED------LSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG-----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCEANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGE---SSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEAASEVDDLT---------LPASVR---NSNAY---KGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMN--GKNRVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            S D+T++RH V ++ FGF++D++IR LSVK I+S V+FD+L NP+ GGLYDPALGP+D +M+C TC   QK CPGH+GHI+L V VY P+LF  +  +++ KC +CH  R S S TR+  V+++L+D G   +A   LEL D   G   ++G+   V              + ++   L      L   PR+          R  ++ +F+K M    KC+NC A SP +R+D   K+F  PL+ ++++ N++    + SA +  +           D +   DDSD                            +  + AA  ++  +      ++  +EV  QMQLLW+ E     L++                    N  A+ +  +    +G++ FF+  + V P RFRPP+ MGD   EH QNIYL K++ L E++    NA  L  E+      LS  +  W ELQT VNC ID+SK  R  +D+  G++Q++EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T+EIG+PLRFAK LT  Q V  WNV  MR LVE G + +PGANFVE+ +G+L+ L + +  +RR +   LL+              ++VWRHL  GD +L+NRQPTLHKP +MAH  RVL NP  QTIRMHYANCNT+NADFDGDE+N H PQNE+A++EA  +A  D QYLVPT G+PLRGLIQDHVD GVK+  +D F T+  Y QLVY A + L G +     G I TLPP+I+KP   W+GKQVMSTI+  LT G P LNL+ KA+  A  +G    EH+IIFR+GELLQGVLDK  FGAS+YG VHA +ELYGS  A +LLTALGRVLT +LQ +GHTC +EDLTLN  AE  RR ++ QS   G+ A  E      G     D      + +E    IR  T    + +  ++  A +D HM   +   +S+IIK+CLP GQ K FP NCFSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVPV++SGKSLPSF+ F+PSPRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L       V YD+TVR+ +G V QFLYGEDGVDT  + +L  K  Q+ FLA N+ +L  K  I   F  ++G DV      H +I+ AK +          G   G+    +   G +V ARR +            G  +W++   E  W  A +  V   G    VY L ++D G+ V K+P      +S   +         E+  M   ++ I    +  +PDPV   L +N  +GCVSE  Q  +  +   +P++L E  S  N +G       G VS     +AF L++WVKYMR L  PGE VG+I AQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP  ++PV    T   A  +  +L+++ L++L+ N  GI V+++ ++ +   LW R YTI L  F  + I +AF I  K++ RA    F+  LL  +K ++R++G +++ +NG  +M    K              DN++E  A+    AK           D      QGTL FG +KE A YG MD+++  I KA +        D  D DE        +GS D E +S+ +D+           P +V    N N Y    GV+     GE+++  +  ++ + LL+V L E  A++ +VRS  GI   Y V++ ++  GK    IQ +G +FE +W+L       VLD+N+L +ND++ +   YGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT  G Y PLNR+GMA   S   Q++FET+ +F+T+AA     D +  PSAR+V+G+    GTG+F L  P
Sbjct:    4 SMDQTILRHEVSDVCFGFYSDDEIRALSVKQISSRVSFDSLKNPVIGGLYDPALGPIDFNMICPTCHMTQKECPGHLGHIELPVPVYSPVLFATMLNILKRKCMSCHKFRKSASTTRIYRVRLLLLDNGYIDEAAQMLELLDQKDGNF-EEGYEQTVMRQQ-------AILDEYERLALSGTATYLPKNPRSV------EVERDNIINSFLKGM--TYKCENCEAHSPGVRQDSHAKIFLKPLSLRSQRHNQSRAVHLNSAFEMININ---------DKKPAADDSDSE-------------------------ADEDMDAAKDEANTS---NHTYLAPLEVMSQMQLLWQNEEGVTELMWG-------------------NRTAASRRGKNHALDGWKKFFLNVIPVAPSRFRPPVIMGDSQFEHSQNIYLSKIISLAEQMVTMGNARRLAEEEAPQSINLSDKIYLWTELQTQVNCLIDNSKAKRP-EDMPQGIKQLIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSEIGVPLRFAKTLTLPQAVTPWNVIEMRQLVENGPDIHPGANFVENERGQLIDLSKRTLHQRRAIGKTLLTRSASAQGAHQKHKVKRVWRHLKSGDVVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARSEAYNIANNDNQYLVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKDMYLQLVYSAWTCLDGEK-----GVIKTLPPTILKPQPLWTGKQVMSTIVLMLTAGKPSLNLNSKAKIKADLYGPGNAEHIIIFRDGELLQGVLDKAQFGASEYGWVHACYELYGSGTAAKLLTALGRVLTCYLQYSGHTCALEDLTLNEHAEKERRRLVEQSVVQGEIAYSEFA----GLSGLGDKE--RRMNDEERAKIRD-TMQLKMAQDLENTSAALDSHMMGFVHGSNSEIIKSCLPHGQNKSFPANCFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPVLVSGKSLPSFEPFDPSPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDL------HVAYDHTVRNCDGNVVQFLYGEDGVDTINSAFLSGKPDQMSFLAMNHASLTHKFGITAEFLEKSGMDVVEPAKIHHQIKDAKRR----------GYENGDFELHTMKEGLVVLARRLKD-----------GHHKWKKGHFELGWHEAVIKNVDDGGEF-PVYDLTYKDTGLTVYKVPEFKFFKASTSTMP--------ENAYMAGNVQLI----KPQLPDPVMHALQLNNHIGCVSEKTQQHIETYSKANPSNLLE--SKKNKIG-------GVVSS----SAFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASKKMSTPMMTIPVLPTATPAQAVAVEQKLNQVPLAELIRNTKGIRVQDQFLESENRVLWCREYTIRLYFFKPKLIREAFGITTKEIQRAFGKSFVSRLLTLLKHEMRKSGVQVSVENG--SMSVRSK--------------DNIEEEDAEPTRRAKXXXXXXXXXXXD------QGTLKFGSQKEAAGYGEMDDDDVEIQKAQN-------TDDQDMDESAEKSKQADGS-DTENSSDDEDVAPIKVIKGELKPVNVTDTVNKNPYFAGAGVNTTEHYGELKL--RFPANFKTLLLVPLIEKIASQVLVRSCDGISRCYTVKQRLDKSGKEEQCIQTQGLNFEAIWELDH-----VLDVNRLVTNDIYQVLLNYGVEAARASISKQIQDVFGVYGISVDPRHLSLLADYMTHYGDYMPLNRSGMARKGSSFQQITFETSMKFLTQAATGNFGDNMSGPSARLVLGQPVKLGTGLFSLMTP 1754          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: W4FVL2_9STRA (DNA-directed RNA polymerase subunit n=12 Tax=Aphanomyces TaxID=100860 RepID=W4FVL2_9STRA)

HSP 1 Score: 1350 bits (3495), Expect = 0.000e+0
Identity = 823/1931 (42.62%), Postives = 1104/1931 (57.17%), Query Frame = 0
Query:    4 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLED----ELQGFPRARWCGGHNRTVRRQ-MVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVE--------DKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLK--------------GEDLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG-----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLP---GLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQD-----GCEANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGES--SFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFEDGVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAAQRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELL-DGDDQDEIEXXXXXDEGSVDMEAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN--RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            D++++RH V E+ FGF++D++IR LSVK ITS ++FDTL NP+ GGLYDPALGPVD +M+C TC   QK CPGH+GHI+L V VY P+LF  L  +++ KC +CH  R S + +RV  V+++L+D G  ++A  L                +Q+ D  D N   S+     R    L++     L G  ++      +  V R  ++ +F+K M +  KC+NC A SP +R+D   K+F  PL+ ++ + N++    + SA  S                                      GGS          + G++   SD     KV         ++++  +EV  Q+QLLW+ E   L L++           +R V+ G   D A       A  +G+R FF++ + V P RFRPP+ MGD + EH QNIYL K++ L+++L N   ++              G DLS  +  W ELQT VNC IDSSK  R   +V  G++Q++EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T+EIG+PL+FAK LT  Q V  WNV+ MR LVE G + +PGANFVE+ +G+L+ L + +  +R  +   LL+              ++VWRHLH GD +L+NRQPTLHKP +MAH  RVL NP  QTIRMHYANCNTYNADFDGDE+N H PQNE+A+AEA  +A  D QY+VPT G+PLRGLIQDHVD GVK+  +D F T+  Y QLVY A + +    G EIV        LPP+I KP   W+GKQVMSTIL  LT G P+LNL+ KA+  A  +G    EH+++FR+GELLQGVLDKG FGA+++G VHAV+ELYGS  A +LLTALGRVLT +LQ AGHTC +EDLTL   AE  RR ++  +   G+ A  E     D       EA+   +    + ++    IR  T    + E  D   A +D HM   +   SSDIIKACLP GQ K FP NCFSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVPV++SGKSLPSF+A++P+PRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L       VGYD+TVR+GEG V QFLYGEDG+D  Q  +L  K  QL FLA N+ +L  K  I   F   +G D+      H  I+ AK      +    V A+ G    S   G  + ARR ++           G  +W++   E  W  A +  V   G       L  + G+   K+P      +S     +    S +  Q +R ++           PDPV  +L +N  +G +SE  Q  +  +   +PA L E   T              +SP      F L++WVKYMR L  PGE VG+I AQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS+ + TP  +VP+    +   A+++  RL+++ LS+L+ N  GI V +   +  T  LW R YTI L  F  ++I  AF I  K+V R+   +F+  LL  +K ++R++G  L+    +   M                  DN   S         R  K   +   DD     QGT+ FG KKE + YG MD+E++ I       Q +     G    E       D+ +     A E+D + +  +VR S  + G   N K    E+ ++  ++ + LL+V L E  A + +VRS  GI   Y V++  NG +     IQ  G +F+ +W+L +     VLD+N+L++ND++ + + YGVEA RASI+ +I +VFG YGI VD RHL L+AD+MT +G Y PLNR+GM    S   Q++FET+ +F+T AA    +D +  PSAR+V+G+    GTG F L  P
Sbjct:    6 DQSILRHEVSEVSFGFYSDDEIRDLSVKQITSRISFDTLKNPVLGGLYDPALGPVDFNMICPTCHLTQKECPGHLGHIELPVPVYSPVLFTTLINILKRKCLSCHKFRRSSANSRVFRVRILLLDNGYVEEAASL----------------LQLLDQKDGNFDESSTQTVQRQQAILDEFERLALSGSSKSLPRNARSVEVERDGIIASFLKGMTN--KCENCEAHSPSLRQDSNAKIFLKPLSLRSIKHNQSRAVRLSSAFDS------------------------------LSKFSTKGGGSXXXXXXXXXXDEGII--DSDDEDGDKVTTADHQGGANQYLAPLEVMSQIQLLWKHEEGLLELMWG----------NRLVANGRSPDSA-------APLDGWRKFFLQVIPVAPSRFRPPVIMGDSLFEHAQNIYLAKIITLSDQLVNVSGMRRGATTNDATSDTNSGVDLSEKIYLWTELQTQVNCLIDSSKAKRP-DEVPQGIKQLIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSEIGVPLKFAKTLTLPQAVTPWNVEEMRQLVENGPDIHPGANFVENERGQLIDLSKRTHHQRVAIGKTLLTRSASAHGAHQEHKVKRVWRHLHSGDVVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTYNADFDGDEMNMHFPQNELARAEAYTIANNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLTKEMYIQLVYSAWACMDHERGAEIV-------VLPPTIWKPTPLWTGKQVMSTILNLLTAGKPKLNLNAKAKIKADLYGPQNAEHVVVFRDGELLQGVLDKGQFGATEFGWVHAVYELYGSGTAAKLLTALGRVLTCYLQYAGHTCALEDLTLTEAAEAERRRLVQHAVVHGEIAYSEFAGLTDVAAARKAEADAKHDSVRLMNDDERAQIRD-TMQKKMAEDLDQTSAGLDSHMMGFVHGSSSDIIKACLPHGQNKSFPANCFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPVLVSGKSLPSFEAYDPNPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDL------HVGYDHTVRNGEGTVVQFLYGEDGIDPMQAAFLSGKPDQLSFLAMNHASLTHKFGISGEFLENSGLDLVEPAHVHQRIKDAKR-----YGYDRVSASVGLEMHSMKAGLTIQARRLKA-----------GASKWKKGSFELGWHTAVIEHVDTTGEYPVYDILYVDTGMTAYKVPQYKRFKASETITPELSYLSGTV-QLLRPIV-----------PDPVMHQLPLNAHIGVISEKTQLEIESYAKTNPAGLLESKKTKALP--VEAQSPMMLSP----LGFRLMVWVKYMRSLCQPGENVGTICAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASQKMSTPMMTVPLLATTSPAAAQQVEQRLNQVPLSELIRNVKGIRVTDEFKESATRVLWVREYTIRLSFFKAKAIRSAFGISMKEVHRSFGRVFVSRLLTLLKHEIRKSGVALSVSRTIDNDM------------------DNASPSH------VGRFSKQGNDDNEDDEEA--QGTMRFGAKKEASGYGDMDDEDQQILAQQLDDQPAVATPSGGSDTENSSDDDADDAAPLKPVAGELDPVAVSETVRKSPYFAGAGFNSKEQFGELKLRFPANFKTLLLVPLIEKVANQVLVRSCPGISRCYQVKQRFNGSDVEEQCIQTAGLNFQAIWELDD-----VLDVNRLATNDIYQVLRHYGVEATRASISKQIQDVFGVYGISVDPRHLNLLADYMTHHGDYMPLNRSGMMRKGSSFQQITFETSMKFLTAAATGNLADDMDGPSARLVLGQPVKLGTGSFSLLTP 1789          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A421EWZ9_9STRA (DNA-directed RNA polymerase subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EWZ9_9STRA)

HSP 1 Score: 1350 bits (3494), Expect = 0.000e+0
Identity = 804/1943 (41.38%), Postives = 1113/1943 (57.28%), Query Frame = 0
Query:    4 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQ-MVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDP-MEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLK--------GED----------LSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCE-ANTDTNGNSS--LPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRVKHA--GTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNG--AGSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSEL-----------LDGDDQDEIEXXXXXDEGSVDMEAASE-----VDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN--RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            D+T++RH V E+ FGF++D +IR+LSVK +TS ++FD+LNNP+ GGLYDPALGPVD +M+C TC Q QK CPGH+GHI+L V VY P+LF  L  L++ KCF CH  R++ + +RV  VK++L+D G T +A +L + L    +++G  D+           ++    ++   L        G  R       +  V+R+ +   F+K++ +  KC+NCGA+SP +R+D + K+F   L+ ++R+ NR+ N  + SA+ +    + GN   G D   +GDDS+  ME                         +    A + DST+      KF+P +E++ Q+QL+W+ E   + L +            R+++ G              + +G+R FF+ A+ V P RFRPP+ MGD   EH QN +L K++ L+E +   +  K        G+D          LS  L  W ELQT+VN  +DSSK   G  DVA G++QV+EKKEGLFRKHMMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTY QPV  WNV+ MR LV  G + +PGANFVE   GRL+ L + S  +R  ++  LL+             ++VWRHL  GD +L+NRQPTLHKP IMAH  RVL NP  QTIRMHYANCNT+NADFDGDE+N H PQNE+A+AEA  +A  D QY+VPT G+PLRGLIQDHVD GVK+  +D F  +  Y QL+Y A + +   ++      I T+PP+I+KP   W+GKQV++++LK LT GLP LNLD KA+     +G+   EH++IFR+GELLQGVLDK  FGAS YG+VH  +E+YG+  A  LL+ALGR+ T +LQ  GHTC +EDLTLN  AE  RR+++  S+ +G+ A  E     +  E      NG     + EE    IR R  T L G   D     +D HM   +   +SDIIK CLP GQ KPFP N FSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVP++ SG+SLPSF+ F+P+PRA G++TDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L+      VGYD+TVR  +G V QFLYGEDG+D  Q+  L  K  Q +F A N+ ++  K+ I   F  +T  D+ +    H E+  AKA             T+  S    G  V ARR +            G  +W+   +E  +  A V+ V           Y +++ D G+    +P      S                 A R +   +D   +    DPV   L +N  +G +SE  Q  LR +   +PA   E      +        A  G +     +T       AF+LL+WV Y+R + APGE VG +AAQ IGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS  + TP  ++P+RD V    A+ +  RL++++LS+L+ +  GI V++     + G LW R Y I L  F ++ I + F +  ++V  +V   F+  LL  I  +++++G  ++A      +        R   G DA    NV                     +   XXXX QGTL FG +KE   YG MDEE++ I K+       ++              +D    +      +G    +         ++ L +P  VR +  +    +N +   +E+ ++  + ++ LLMV L E  A + +V+   G+   Y++ + +  K   +  +Q EG +F+ +W   +     +LD+N LS+ND++ + QTYGVEAARA+I+ +IT+VFG YGI VD RHL L+AD+MT  G Y PLNR GM    S   Q+SFET+ +F+ +AA+ G  D++ SPSA +V+G+    GTG F L QP
Sbjct:  485 DQTILRHEVAEVAFGFYSDAEIRELSVKQLTSRLSFDSLNNPVVGGLYDPALGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFNVLLTLLKRKCFTCHKFRVASASSRVIRVKILLLDNGFTDEAAQLGELLE---QRNGVEDEPPQRTFQRQQAILDE--YERLALSKSNSSTYGKTRLLRPLHRSAEVQREKLATEFLKNVKN--KCENCGAISPAVRQDASAKIFLKALSARSRKVNRSKNLTVTSALDT----IRGNVSDGDDEPVNGDDSESEMED------------------------DEDKYATTEDSTS----RSKFLPPLEIQSQLQLMWQNEDGLMELFYG----------DRNIASGRTTGR---------KPDGWRKFFLNAIPVAPSRFRPPVFMGDKQFEHAQNSHLSKIMALSESIVQGDYYKRQGVTNSDGDDSDAEKEEKVNLSRKLALWTELQTSVNLLVDSSKAKPGT-DVAQGIKQVIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRRLVINGPDVHPGANFVESETGRLIDLSKRSPHQREAISKTLLTRSASAQGTSKNRVKRVWRHLKTGDVVLMNRQPTLHKPSIMAHTTRVLTNPKMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARAEAYNIACNDNQYIVPTDGSPLRGLIQDHVDSGVKLTQRDTFLNKDMYMQLLYNAWACME--DVGAEKAHIETVPPAILKPEPLWTGKQVVTSVLKMLTKGLPPLNLDSKAKIKGDLYGSENAEHIVIFRDGELLQGVLDKSQFGASMYGMVHGCYEVYGARIAADLLSALGRLFTCYLQFVGHTCAMEDLTLNTPAEKRRRKLVEDSEVMGEEAYAEFAGLTELLENKRASENGGKKRRMNEEERVQIRDRMRTLLSGPDADYNAKALDAHMMGCVHGSNSDIIKTCLPSGQSKPFPANNFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPILCSGRSLPSFEPFDPAPRAGGYVTDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEDLQ------VGYDHTVRSSDGSVIQFLYGEDGIDPVQSAMLSGKDAQFNFQAMNHRSISHKYGINAKFFEKTKLDIMKPLKLHEEVREAKANNY----------TSSSSVLKSGVNVMARRLKQ-----------GETKWKRGNIELGFHAATVVAVSEEIEDGLECKYDIQYLDTGLKAFGVPRTTKFKSCKPT------------NATRAMSGRVDI-IKVSFEDPVMQSLPLNDHVGLISENIQDKLRDYNKRNPAKCLELSKRRKSXXXXXXKHAADGEIDRDVMQTKHVVSPDAFQLLVWVNYLRSMCAPGENVGILAAQGIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASAKMSTPMMTIPLRDDVESSRAQEVEQRLNQVALSELIHSTNGIQVKDEFHSSENGILWVRDYHIRLTFFELKEIKRVFGLSAEQVFNSVGKGFVYRLLTLISREMKKSGVTVSAAASTSNL--------RTPAGSDANRKKNV---------------------DXXXXXXXEQGTLRFGSRKEVQGYGEMDEEDEKIRKSQIPNDDLDVDSXXXXXXXXXXQAEDSSSDDEPMHTGKGKKSKKLQKTCLVEGMEPLDVPFGVRKNPYFVFCGHNEEENFVELRLRFPTHSKTLLMVPLVEKVAKQVLVQYCPGVSRCYLINQRIGEKQEEKPCVQTEGLNFQEIWGFDD-----ILDVNNLSTNDIYQVLQTYGVEAARANISKQITDVFGVYGISVDPRHLSLLADYMTAQGGYMPLNRMGMNYKGSSFQQISFETSMKFLAQAAMGGLVDKIDSPSASVVLGQPARVGTGSFSLLQP 2292          
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Match: A0A5D6XPF2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF2_9STRA)

HSP 1 Score: 1349 bits (3492), Expect = 0.000e+0
Identity = 814/1967 (41.38%), Postives = 1120/1967 (56.94%), Query Frame = 0
Query:    4 DRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGLYDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLMRAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDGFRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTVRRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANRAVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEXXXXXXXXXXXXGGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRKEFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFFIRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNE-----------KLKNAESLKGE-------------DLSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRHLVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPG----------QKVWRHLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGGVKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQRWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGELLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAGHTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGC-------EANTDTNGNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIKACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPVMISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGEDGVDTTQTKYLHSK--QLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAHTEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGVGSGGDRWEEAVLEKNWQCAEVLRV--KHAGTTRAVYTLRFED-GVVVRKMPLKVMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVNKDLGCVSEAFQSSLRLFLDGDPASLRE------------------GFSTANAVGHFNGAGSGHVSPAAQRT-------AFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRLSLSQLLFNKGGIVVRERIVKGDTG-LWERHYTITLKLFPIRSIVKAFDIDFKKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQDGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDXXXXGQGTLTFGKKKEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEXXXXXDEGSVDMEA----------------ASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVGLAEAAAAKTMVRSQKGIRGAYVVEKVMNGKN--RVLIQVEGSSFETVWQLKEGGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQRHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSGSSDRLKSPSARIVVGRVGDYGTGMFELRQP 1880
            D+T++R+ V E+ FGF++D +IR+LSVK +TS ++FD LNNP+ GGLYDPALGPVD HM+C TC Q QK CPGH+GHI+L V VY P+LFG +  L++ KCF CH  R + +++RV  VK++L+D+G   +A  L + L    +++G  D+ Q         ++    ++   L     + +G  R R     +   R ++   F K +    KC+NCGA+SP +R+D   K+F   L+ ++R+ANR+ N  + SA+ +    +SG+   G D   D DDS                         ++ +  G  AAS D+++      KF+P +EV+ Q+QL+W+ E   + LL+            R+V+ G            AA  +G+R FF+  + V P RFRPP+ +GD   EH QN YL K+L L+E           KL  A +  G              +L+  L  W ELQ  VNC +DSS+   G  D A G++QV+EKKEGLFRK+MMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTY QPV  WNV+ MR LV  G + +PGANFVE   GRL+ L R S  +R  ++  LL+             ++VWRHLH GD +L+NRQPTLHKP +MAH  RVL NP  QTIRMHYANCNT+NADFDGDE+N H PQNE+A+AEA  +A  D QYLVPT G+PLRGLIQDHVD GVK+  +D F T+  Y QL+Y A + + G      +  I  +PP+I+KP   W+GKQV++++LK LT GLP LNLD KA+     +GA+  EH+++FR+GELLQGVLDK  FGAS +G VHA +E+YGS  A  LLT LGR+ T +LQ AGHTC +EDLTL   AE  RR+++ +S   G+ A  E     D         EA   + G   + E     IR+R    L G   D     +D HM   +   +SDIIK CLP GQ K FP N FSLMVLTGAKGS VNHSQ+SC LGQQALEGRRVP++ SG+SLPS++ F+P+PRA G+ITDRFLTG+RPQEYY HCMAGREGLVDTAVKTSRSGYLQRCL+KHLE+L+ S      YD+TVR  +G V QFLYGEDGVD   +  L  K  +  F A N+ ++  K+ I   F   +  D+ +    H E     A+ A  H     G     S    G  V ARR ++           G  +W+   +E+ +  AEVL +  ++     + Y +++ D G+    +P   +  +             +  +AM   ++ +    +    DPV   L +N+ +GCVSE  Q  LR + + +PA+  +                     TA   G     G+  +     RT       AF+LL+WV Y+R +A PGE VG IAAQSIGEPSTQMTLNTFHLAGHG ANVTLGIPRLREIIMTAS  + TP  ++P+   V    A  +  RL++++L++LL N+ G+ VR+  V  + G LW R YTI L LF ++ I +AF +    V  AV   FI  LL+ I  +++++G  + A        F+G   +RG + G                         D            QGTL FG ++E   Y  MD+E++ + +A              + +         G  D EA                A  ++ L +P SVR +  +     N K   +E+ ++  + ++ +LMV L E  A + +V+   GI   Y++ + +         +Q EG +F+ +W   +     +LD+NQL++ND++ + QTYGVEAARASI+ +I +VFG YGI VD RHL L+AD+MT  G Y PLNR GM +  S   Q++FET+ +F+T+AA++G+SD L+SPSARI++G+    GTG F L QP
Sbjct:    6 DQTILRYEVAEVAFGFYSDAEIRELSVKQVTSRLSFDALNNPVVGGLYDPALGPVDFHMICPTCHQTQKECPGHLGHIELPVPVYNPVLFGHMLTLLKRKCFTCHKFRSASARSRVLRVKLLLIDSGFDDEAATLAELLE---QRNGVEDEPQQQTFRRQQAILDE--YERLALSQAGAQQRG-QRLRQLARLSEVQREKLAAEFFKGLKA--KCENCGAISPGLRQDAKAKIFLRGLSARSRKANRSKNLTVTSALDTMHGNVSGDERMGSD---DSDDS-----------------------GSESELEDGKFAASEDTSS----RSKFLPPLEVQSQLQLMWKNEDGLMELLYG----------DRNVASGRA----------AAPADGWRKFFLNVIPVAPSRFRPPVFLGDKQFEHAQNSYLSKILTLSENIVQGSYYEQQKLPRAGAEDGXXXXXXXXXTAPQVNLARKLAVWTELQVNVNCLVDSSQAKAGA-DAAQGIKQVIEKKEGLFRKNMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESESGRLIDLKRRSAHQREAISKTLLTRSASAQGTSQHRVKRVWRHLHTGDIVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARAEAYHIAANDHQYLVPTDGSPLRGLIQDHVDSGVKLSQRDTFLTKDLYMQLLYNAWASMEGAGAA--AAHIEVVPPAILKPQALWTGKQVITSVLKMLTKGLPPLNLDSKAKIKGDLYGATNAEHVVVFRDGELLQGVLDKSQFGASMHGFVHACYEVYGSRVAADLLTTLGRLFTCYLQFAGHTCALEDLTLTKDAERRRRKLVDESVLNGEEAYAEFAGLTDLLAAKRSEEEATPGSRGRRRMNETERAQIRERMRALLAGPDADQNAKALDAHMMGTVHGSNSDIIKTCLPAGQTKAFPANGFSLMVLTGAKGSMVNHSQISCGLGQQALEGRRVPILSSGRSLPSYEPFDPAPRAGGYITDRFLTGLRPQEYYHHCMAGREGLVDTAVKTSRSGYLQRCLMKHLEDLQVS------YDHTVRGADGSVVQFLYGEDGVDPLMSAMLSGKDAEFSFQAMNHRSISHKYGIDAQFFERSKLDIMKPLKLHAE-----ARAAQAHGFEQPG-----SLLRAGVRVQARRLKA-----------GETKWKRGNIERGFFAAEVLALAQEYEDPRDSTYDIQYVDTGLKAFNVPRTTVFKARKPT---------NHTRAMSGRVELL----KAERADPVMQSLELNQHVGCVSERIQDKLRAYSERNPANCLDLLRAKKSXXXXXXXXXXXXXKTAEQSGD---DGADEIDREKMRTKHTVSPDAFQLLVWVNYLRSMANPGENVGVIAAQSIGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIIMTASEKMSTPMMTIPLLAHVPAARAHEVEQRLNQVALAELLSNERGVAVRDEFVPSENGILWVRDYTIRLTLFKLKQIKRAFGLSADDVFGAVGKNFIGKLLSFISREMKKSGVSVAAA-AEATNNFAGS--TRGTNAGX--------------XXXXXXXXXXDE-----------QGTLRFGSRREVQGYE-MDDEDEQLRQAQDDSDXXXXXXARSK-KARGAKRASVGPADEEATGSGAKSKKSGMATALAGGLEALDVPMSVRKNKYFVYCGRNTKAHYVELRLRFPTHSKTVLMVPLVERVAKQVLVQHCPGISRCYLINQRLGDAQDETPCVQTEGLNFQEIWAFDD-----ILDVNQLATNDIFQVLQTYGVEAARASISKQINDVFGVYGISVDPRHLSLLADYMTAYGGYMPLNRMGMNNKGSALQQITFETSMKFLTQAALAGNSDNLESPSARIILGQPPRVGTGSFSLLQP 1833          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig967.17353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ16_9PHAE0.000e+067.43DNA-directed RNA polymerase subunit n=1 Tax=Ectoca... [more]
D7FNY1_ECTSI0.000e+070.97DNA-directed RNA polymerase subunit n=1 Tax=Ectoca... [more]
A0A836C8M0_9STRA0.000e+051.21DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
K8YRY5_NANGC0.000e+044.17DNA-directed RNA polymerase subunit n=2 Tax=Monodo... [more]
A0A024TY59_9STRA0.000e+044.15DNA-directed RNA polymerase subunit n=1 Tax=Aphano... [more]
H3H1S7_PHYRM0.000e+041.87DNA-directed RNA polymerase subunit n=22 Tax=Peron... [more]
A0A1V9ZEK2_9STRA0.000e+043.15DNA-directed RNA polymerase subunit n=1 Tax=Thraus... [more]
W4FVL2_9STRA0.000e+042.62DNA-directed RNA polymerase subunit n=12 Tax=Aphan... [more]
A0A421EWZ9_9STRA0.000e+041.38DNA-directed RNA polymerase subunit n=3 Tax=Phytop... [more]
A0A5D6XPF2_9STRA0.000e+041.38DNA-directed RNA polymerase subunit n=1 Tax=Pythiu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006592RNA polymerase, N-terminalSMARTSM00663rpolaneu7coord: 397..704
e-value: 2.6E-113
score: 392.4
IPR038120RNA polymerase Rpb1, funnel domain superfamilyGENE3D1.10.132.30coord: 853..1032
e-value: 6.0E-55
score: 187.9
NoneNo IPR availableGENE3D2.20.25.410coord: 1076..1117
e-value: 5.9E-8
score: 34.2
NoneNo IPR availableGENE3D1.10.150.390coord: 1832..1875
e-value: 7.8E-6
score: 27.5
NoneNo IPR availableGENE3D3.30.70.2850coord: 1452..1631
e-value: 1.6E-12
score: 49.6
NoneNo IPR availableGENE3D1.20.120.1280coord: 2..126
e-value: 7.7E-27
score: 95.8
NoneNo IPR availableGENE3D3.30.1490.180coord: 535..604
e-value: 1.5E-74
score: 251.6
NoneNo IPR availableGENE3D2.40.40.20coord: 492..670
e-value: 1.5E-74
score: 251.6
NoneNo IPR availableGENE3D1.10.357.120coord: 1255..1368
e-value: 2.8E-6
score: 29.8
NoneNo IPR availablePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 9..1879
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 12..1393
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 1359..1878
IPR042102RNA polymerase Rpb1, domain 3 superfamilyGENE3D1.10.274.100coord: 680..852
e-value: 6.6E-57
score: 193.8
IPR007081RNA polymerase Rpb1, domain 5PFAMPF04998RNA_pol_Rpb1_5coord: 1030..1828
e-value: 1.9E-81
score: 273.4
IPR000722RNA polymerase, alpha subunitPFAMPF00623RNA_pol_Rpb1_2coord: 502..674
e-value: 1.7E-57
score: 194.2
IPR007080RNA polymerase Rpb1, domain 1PFAMPF04997RNA_pol_Rpb1_1coord: 11..261
e-value: 1.1E-23
score: 84.0
IPR007083RNA polymerase Rpb1, domain 4PFAMPF05000RNA_pol_Rpb1_4coord: 937..1023
e-value: 2.9E-19
score: 69.0
IPR007066RNA polymerase Rpb1, domain 3PFAMPF04983RNA_pol_Rpb1_3coord: 679..858
e-value: 4.5E-32
score: 111.2
IPR015699DNA-directed RNA pol I, largest subunitPANTHERPTHR19376:SF11DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1coord: 9..1879

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig967contigH-paniculata_contig967:3033..24102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig967.17353.1mRNA_H-paniculata_contig967.17353.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig967 2830..25085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig967.17353.1 ID=prot_H-paniculata_contig967.17353.1|Name=mRNA_H-paniculata_contig967.17353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1882bp
MSHDRTVIRHAVEEIGFGFFTDEDIRKLSVKCITSPVTFDTLNNPLPGGL
YDPALGPVDRHMVCETCGQDQKNCPGHIGHIDLAVSVYQPLLFGALYKLM
RAKCFNCHNLRLSRSQTRVTAVKMMLVDAGRTQDALELEDTLLGYLRQDG
FRDDVQMDDTPDANGLVSANGFKDRVLGNLEDELQGFPRARWCGGHNRTV
RRQMVEAFIKDMGDCKKCQNCGALSPRIRKDEANKLFQVPLNEKARQANR
AVNSDILSAVQSRDPGMSGNGGPGIDNEHDGDDSDPMEDDESEDDGEDVD
GGSGGVGNIQTGINTGLVAASSDSTAAPKVEDKFMPTIEVELQMQLLWRK
EFMALNLLFAYGQIEFLAQASRDVSGGVVNDEASQQTLQAAQEEGYRLFF
IRAVAVPPPRFRPPMDMGDFVAEHPQNIYLQKVLGLNEKLKNAESLKGED
LSSVLTTWVELQTTVNCFIDSSKDPRGMKDVAPGLRQVLEKKEGLFRKHM
MGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYAQPVADWNVQAMRH
LVEAGANEYPGANFVEDAQGRLLHLDRLSDLKRRGVAARLLSTPGQKVWR
HLHDGDCMLVNRQPTLHKPGIMAHRVRVLRNPTYQTIRMHYANCNTYNAD
FDGDEINCHLPQNEVAKAEANLLAFTDEQYLVPTSGNPLRGLIQDHVDGG
VKMCSKDCFFTRGEYQQLVYQALSGLPGLEIVPPSGRIFTLPPSIMKPVQ
RWSGKQVMSTILKHLTVGLPQLNLDGKARTPAVAFGASENEHLIIFREGE
LLQGVLDKGAFGASQYGLVHAVHELYGSTAAGQLLTALGRVLTIFLQSAG
HTCGIEDLTLNMQAEHSRREMISQSQGIGQRAMQEMLNEQDGCEANTDTN
GNSSLPEETVEDIRQRTATFLLGEGRDDRLAEIDRHMQSALAPVSSDIIK
ACLPDGQEKPFPQNCFSLMVLTGAKGSKVNHSQVSCALGQQALEGRRVPV
MISGKSLPSFQAFEPSPRANGFITDRFLTGIRPQEYYFHCMAGREGLVDT
AVKTSRSGYLQRCLVKHLEELKASSIFRVGYDNTVRDGEGCVQQFLYGED
GVDTTQTKYLHSKQLDFLARNYHALRVKHSIKPSFESETGFDVSRAKTAH
TEIESAKAKQAMCHSGPPVGATAGESSFVVGDIVFARRKRSLPGNGDGGV
GSGGDRWEEAVLEKNWQCAEVLRVKHAGTTRAVYTLRFEDGVVVRKMPLK
VMVSSSGGELEDSGSGSDSEDQAMRVLIKSIDDGGEHGIPDPVQSRLSVN
KDLGCVSEAFQSSLRLFLDGDPASLREGFSTANAVGHFNGAGSGHVSPAA
QRTAFELLMWVKYMRCLAAPGEAVGSIAAQSIGEPSTQMTLNTFHLAGHG
GANVTLGIPRLREIIMTASRNLKTPSTSVPVRDGVTKQDAERLALRLSRL
SLSQLLFNKGGIVVRERIVKGDTGLWERHYTITLKLFPIRSIVKAFDIDF
KKVCRAVYTIFIPHLLAGIKADLRRTGEKLTAKNGVGAMMFSGKNASRGQ
DGGDATAADNVQESFAQKMATAKRVRKSDAEFESDDEDEDGQGTLTFGKK
KEQASYGGMDEEEKAIWKAMSGKQTSELLDGDDQDEIEGDDEDDEGSVDM
EAASEVDDLTLPASVRNSNAYKGVSNNRKRGEIEVAVKLASSNRRLLMVG
LAEAAAAKTMVRSQKGIRGAYVVEKVMNGKNRVLIQVEGSSFETVWQLKE
GGDGGVLDLNQLSSNDVWAMCQTYGVEAARASITSEITNVFGAYGIQVDQ
RHLGLVADHMTFNGSYRPLNRAGMADFSSPCLQMSFETTAEFMTKAAVSG
SSDRLKSPSARIVVGRVGDYGTGMFELRQPT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006592RNA_pol_N
IPR038120Rpb1_funnel_sf
IPR042102RNA_pol_Rpb1_3_sf
IPR007081RNA_pol_Rpb1_5
IPR000722RNA_pol_asu
IPR007080RNA_pol_Rpb1_1
IPR007083RNA_pol_Rpb1_4
IPR007066RNA_pol_Rpb1_3
IPR015699DNA-dir_RNA_pol1_lsu