prot_H-paniculata_contig9474.17221.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9474.17221.1
Unique Nameprot_H-paniculata_contig9474.17221.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI)

HSP 1 Score: 105 bits (261), Expect = 2.910e-25
Identity = 52/111 (46.85%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    3 GSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDK-----SNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWSN 108
            G+LMYA  GSRPDIA+A+   ++    P  E  +   R+F YL     LR+T+         +G    G+ D DWAGD  DR+ST+ YVFKL GGAISWCSRKQQ +  S+
Sbjct:   59 GALMYAMLGSRPDIAFAVGTLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSS 169          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: UPI0018A84BFC (secreted RxLR effector protein 161-like n=1 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A84BFC)

HSP 1 Score: 100 bits (248), Expect = 1.580e-24
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    3 GSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWS 107
            GS+MYA+  SRPD+++A+   AR   +P +      KRI  YL    + ++ F    N H+ EGF D DW GD++DRKST+ YVFK  GG ISW S+KQQ    S
Sbjct:   42 GSIMYAAQVSRPDVSFAVGALARYNNNPGKAHWQAVKRIMRYLKGTINYKLQFSKDENVHI-EGFSDADWTGDLDDRKSTSGYVFKFQGGCISWNSKKQQTTALS 145          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA)

HSP 1 Score: 102 bits (255), Expect = 3.230e-24
Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0
Query:    1 MAGSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWS 107
            + GSLMY +T +RPDI YA+   +R ME P+       KR+F YL    DL + ++ K NG +  GF D+++AGD++DR+ST+ +VF +  GAISW S+KQQ+VT S
Sbjct:   86 IVGSLMYLTT-TRPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDLGVFYK-KINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLS 190          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: UPI0018A876E3 (secreted RxLR effector protein 161-like n=2 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A876E3)

HSP 1 Score: 100 bits (249), Expect = 1.120e-23
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    3 GSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWS 107
            GS+MYA+  SRPD+++A+   AR   +P +      KRI  YL    + ++ F    N H+ EG  D DWAGD++DRKST+ YVFK  GG ISW S+KQQ    S
Sbjct:   42 GSIMYAAQVSRPDVSFAVGALARYNNNPGKAHWQAVKRIMRYLKGTINYKLQFSKDENAHI-EGISDADWAGDLDDRKSTSGYVFKFQGGCISWNSKKQQTTALS 145          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: A0A329S445_9STRA (Uncharacterized protein n=2 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S445_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.640e-23
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    3 GSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITF---RDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWS 107
            G LMY +T +RPD+A+A+ Q +R + +PS +   T KR+  YL+   D  IT+   R++    V EGF D+DWA D E RKSTT +V  L GGAI+W SR+Q ++  S
Sbjct:   27 GMLMYLATSTRPDMAFAVGQLSRFVGNPSMKHVGTLKRVLRYLAGTLDYSITYSRQREEKKEVVLEGFCDSDWANDPEQRKSTTGFVLMLAGGAIAWMSRRQSIIALS 134          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: A0A6A3X4P1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X4P1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.000e-23
Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 0
Query:    3 GSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITF-RDKSNGH--VFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWSNA 109
            G LMY +T +RPD+A+ + Q  R + +PS++   T KR+  YL+   +  I++ R + N +  V EGF D+DWA D E RKSTT +VF L GGA++W SR+Q ++T S A
Sbjct:  294 GMLMYLATSTRPDLAFGLGQLRRFVANPSKKHVGTSKRVLRYLAGTLEYGISYLRQQGNAYEVVLEGFSDSDWANDPEQRKSTTGFVFTLAGGAVAWMSRRQSIITLSTA 403          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: A0A6A3HJM7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HJM7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.850e-23
Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    3 GSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDK---SNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWSNA 109
            G LMY +T +RPD+A+A+ Q +R + +PS +     KR+  Y++   D  IT+  K   +   V EGF D+DWA D E RKSTT +VF L GGAI+W SR+Q ++  S A
Sbjct:   27 GMLMYLATSTRPDLAFALGQLSRFVANPSPKHVGALKRVLRYVAGTLDYGITYSRKQTEAKDVVLEGFCDSDWANDPEQRKSTTGFVFTLAGGAIAWMSRRQSIIALSTA 136          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: A0A1X7SEB0_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SEB0_AMPQE)

HSP 1 Score: 99.8 bits (247), Expect = 5.120e-23
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 0
Query:    1 MAGSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWSNA 109
            M GSL+YA+  +RPDIA A+   ++   +PS    +  KRIF YL    +L + F+ K+ G+V  G+ D DWAGD++DR ST+  +F L GGAISW S+KQ  V+ S A
Sbjct:   89 MVGSLLYAAMATRPDIAQAVGAVSKFCSNPSETHLTAVKRIFRYLKDTVNLGLKFQ-KTEGNVLVGYSDADWAGDLDDRHSTSGNLFLLAGGAISWLSKKQPTVSLSTA 196          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: C0SQ79_NEOYE (Polyprotein n=2 Tax=Neopyropia yezoensis TaxID=2788 RepID=C0SQ79_NEOYE)

HSP 1 Score: 102 bits (253), Expect = 6.280e-23
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0
Query:    1 MAGSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWSNA 109
            + GSLMY S  +RPD+AYA+ + ARRM  P+  D    K +  YL    ++ IT+  ++N    EG+VD+D+AGD + RKSTT +V  L+GGAISW SR Q+LV  S A
Sbjct: 1183 LVGSLMYLSNQTRPDLAYAVGKLARRMSAPTEGDWRLAKGVLRYLQGTRNMGITYGKEAN---LEGWVDSDFAGDTQSRKSTTGFVVTLHGGAISWRSRMQRLVATSTA 1288          
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F)

HSP 1 Score: 99.4 bits (246), Expect = 9.790e-23
Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    3 GSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPDLRITFRDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRKQQLVTWSN 108
            GSLMY  T +RPDI YA+   +R ME P+    +  KRI  Y+    D  + ++ + +G  F G+ D+D+AGD++DRKST+ ++F LN GAISW S+KQQ+VT S+
Sbjct:  105 GSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGVFYK-REDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSS 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9474.17221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060SU91_PYCCI2.910e-2546.85Uncharacterized protein n=2 Tax=Pycnoporus cinnaba... [more]
UPI0018A84BFC1.580e-2445.71secreted RxLR effector protein 161-like n=1 Tax=Lu... [more]
A0A151SR20_CAJCA3.230e-2446.73Retrovirus-related Pol polyprotein from transposon... [more]
UPI0018A876E31.120e-2345.71secreted RxLR effector protein 161-like n=2 Tax=Lu... [more]
A0A329S445_9STRA1.640e-2345.37Uncharacterized protein n=2 Tax=Phytophthora cacto... [more]
A0A6A3X4P1_9STRA4.000e-2344.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3HJM7_9STRA4.850e-2344.55Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A1X7SEB0_AMPQE5.120e-2345.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
C0SQ79_NEOYE6.280e-2347.71Polyprotein n=2 Tax=Neopyropia yezoensis TaxID=278... [more]
UPI0009AB427F9.790e-2346.23uncharacterized protein LOC109950541 n=1 Tax=Prunu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..107
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9474contigH-paniculata_contig9474:7304..7633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9474.17221.1mRNA_H-paniculata_contig9474.17221.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9474 7046..7693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9474.17221.1 ID=prot_H-paniculata_contig9474.17221.1|Name=mRNA_H-paniculata_contig9474.17221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MAGSLMYASTGSRPDIAYAIYQAARRMEDPSREDSSTGKRIFHYLSTVPD
LRITFRDKSNGHVFEGFVDTDWAGDVEDRKSTTRYVFKLNGGAISWCSRK
QQLVTWSNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like