prot_H-paniculata_contig9322.17106.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9322.17106.1
Unique Nameprot_H-paniculata_contig9322.17106.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length139
Homology
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BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Match: A0A6H5K2E2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2E2_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 4.300e-52
Identity = 87/122 (71.31%), Postives = 106/122 (86.89%), Query Frame = 0 
Query:   10 GPRLGKLQGLRRD-EDDDCCGKRRSPSKKEGIKLLPLILMFVMFGPVVLTGLIYVFEIVANSEFAVKIGLSDDPRTRLTKFYTKYNPTKMRDVDKLMRKYQGRYAEMFKKLEDKYVRVSSKQ 130
            GPRLG LQGL+R+ +DDD   K R P KKEGIK+LPLILMFVMFGPVVLTGLI+VF+ VANS++ +KIGL+DDPRTRLTKFY K+NPTKMRDVDKL++KY+GRY EMF++L+ KY R  +K+
Sbjct:    5 GPRLGNLQGLKREGDDDDPQAKMRRP-KKEGIKILPLILMFVMFGPVVLTGLIFVFDYVANSDWGIKIGLADDPRTRLTKFYKKHNPTKMRDVDKLLKKYKGRYPEMFQRLDAKYNRRKTKE 125
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BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Match: A0A835ZDU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU7_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.280e-28
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 0 
Query:    6 PVSGGPRLGKLQGLRRDEDDDCCGKRRSPSK--------KEGIKLLPLILMFVMFGPVVLTGLIYVFEIVANSEFAVKIGLSDDPRTRLTKFYTKYNPTKMRDVDKLMRKYQGRYAEMFKKLEDKYVRVSSKQK 131
            PVSGGPRLGKL+GL   +      KR+  SK        K G+  +P+ILMFV+FGP VL   +Y+F+ V+ S++ + +GLS     +LT FY ++NPTK+R+V  L RKY+GR AE+  +L+DKY R+   +K
Sbjct:   44 PVSGGPRLGKLKGLGESK------KRKGGSKGVPAEAPAKGGLNWMPIILMFVVFGPAVLPVFVYLFDKVSTSDWGINMGLSRSLEAKLTDFYKQHNPTKLREVPSLARKYKGRDAEIMARLQDKYKRLEDLKK 171
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BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Match: A0A448ZFC5_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFC5_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.920e-7
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:   81 DPRTRLTKFYTKYNPTKMRDVDKLMRKYQGRYAEMFKKLEDKY 123
            D RTRLTKFY KYNP+K+  VD  ++KY+GR  EMF+KLE KY
Sbjct:  668 DYRTRLTKFYEKYNPSKIDSVDANLKKYEGREEEMFRKLEAKY 710
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K2E2_9PHAE4.300e-5271.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDU7_9STRA4.280e-2845.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZFC5_9STRA2.920e-765.12PPIase cyclophilin-type domain-containing protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..138
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9322contigH-paniculata_contig9322:348..4101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9322.17106.1mRNA_H-paniculata_contig9322.17106.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9322 348..4101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9322.17106.1 ID=prot_H-paniculata_contig9322.17106.1|Name=mRNA_H-paniculata_contig9322.17106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp
MAINPPVSGGPRLGKLQGLRRDEDDDCCGKRRSPSKKEGIKLLPLILMFV
MFGPVVLTGLIYVFEIVANSEFAVKIGLSDDPRTRLTKFYTKYNPTKMRD
VDKLMRKYQGRYAEMFKKLEDKYVRVSSKQKVRFWENP*
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