Homology
BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Match:
A0A6H5K2E2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2E2_9PHAE)
HSP 1 Score: 171 bits (432), Expect = 4.300e-52
Identity = 87/122 (71.31%), Postives = 106/122 (86.89%), Query Frame = 0
Query: 10 GPRLGKLQGLRRD-EDDDCCGKRRSPSKKEGIKLLPLILMFVMFGPVVLTGLIYVFEIVANSEFAVKIGLSDDPRTRLTKFYTKYNPTKMRDVDKLMRKYQGRYAEMFKKLEDKYVRVSSKQ 130
GPRLG LQGL+R+ +DDD K R P KKEGIK+LPLILMFVMFGPVVLTGLI+VF+ VANS++ +KIGL+DDPRTRLTKFY K+NPTKMRDVDKL++KY+GRY EMF++L+ KY R +K+
Sbjct: 5 GPRLGNLQGLKREGDDDDPQAKMRRP-KKEGIKILPLILMFVMFGPVVLTGLIFVFDYVANSDWGIKIGLADDPRTRLTKFYKKHNPTKMRDVDKLLKKYKGRYPEMFQRLDAKYNRRKTKE 125
BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Match:
A0A835ZDU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU7_9STRA)
HSP 1 Score: 110 bits (276), Expect = 4.280e-28
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 0
Query: 6 PVSGGPRLGKLQGLRRDEDDDCCGKRRSPSK--------KEGIKLLPLILMFVMFGPVVLTGLIYVFEIVANSEFAVKIGLSDDPRTRLTKFYTKYNPTKMRDVDKLMRKYQGRYAEMFKKLEDKYVRVSSKQK 131
PVSGGPRLGKL+GL + KR+ SK K G+ +P+ILMFV+FGP VL +Y+F+ V+ S++ + +GLS +LT FY ++NPTK+R+V L RKY+GR AE+ +L+DKY R+ +K
Sbjct: 44 PVSGGPRLGKLKGLGESK------KRKGGSKGVPAEAPAKGGLNWMPIILMFVVFGPAVLPVFVYLFDKVSTSDWGINMGLSRSLEAKLTDFYKQHNPTKLREVPSLARKYKGRDAEIMARLQDKYKRLEDLKK 171
BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Match:
A0A448ZFC5_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFC5_9STRA)
HSP 1 Score: 58.5 bits (140), Expect = 2.920e-7
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query: 81 DPRTRLTKFYTKYNPTKMRDVDKLMRKYQGRYAEMFKKLEDKY 123
D RTRLTKFY KYNP+K+ VD ++KY+GR EMF+KLE KY
Sbjct: 668 DYRTRLTKFYEKYNPSKIDSVDANLKKYEGREEEMFRKLEAKY 710
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9322.17106.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
M A I N P P V S G G P R L G K L Q G L R R D E D D D C C G K R R S P S K K E G I K L L P L I L M F V M F G P V V L T G L I Y V F E I V A N S E F A V K I G L S D D P R T R L T K F Y T K Y N P T K M R D V D K L M R K Y Q G R Y A E M F K K L E D K Y V R V S S K Q K V R F W E N P * 20 40 60 80 100 120 Expect = 4.30e-52 / Id = 71.31 Expect = 4.28e-28 / Id = 45.52 Expect = 2.92e-7 / Id = 65.12 Sequence A0A6H5K2E2_9PHAE A0A835ZDU7_9STRA A0A448ZFC5_9STRA back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M A I N P P V S G G P R L G K L Q G L R R D E D D D C C G K R R S P S K K E G I K L L P L I L M F V M F G P V V L T G L I Y V F E I V A N S E F A V K I G L S D D P R T R L T K F Y T K Y N P T K M R D V D K L M R K Y Q G R Y A E M F K K L E D K Y V R V S S K Q K V R F W E N P * 20 40 60 80 100 120 Score = Score = Score = Score = Sequence NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 65..138 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..41 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 42..64 None No IPR available TMHMM TMhelix coord: 42..64
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_H-paniculata_contig9322.17106.1 ID=prot_H-paniculata_contig9322.17106.1|Name=mRNA_H-paniculata_contig9322.17106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp back to top