prot_H-paniculata_contig12464.1544.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12464.1544.1
Unique Nameprot_H-paniculata_contig12464.1544.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
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BLAST of mRNA_H-paniculata_contig12464.1544.1 vs. uniprot
Match: A0A6H5KBC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC1_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 4.350e-10
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 0 
Query:    3 QAVINITK----RGLAALKDVTHLDDREANSLDLRPTP-GLQYKRITLKVLLRDEFAKADAVVQETYIYRIAA 70
            ++V N T+     GL AL DVT+L +R A   DL+P+P GL + R+TLK LLR EFA     VQ  YIYR+A+
Sbjct:   92 KSVANATRALKEEGLNALMDVTYLPERPAGHRDLQPSPDGLHFARVTLKALLRPEFAAMPGEVQAAYIYRMAS 164
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12464.1544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KBC1_9PHAE4.350e-1049.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12464contigH-paniculata_contig12464:2981..3193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12464.1544.1mRNA_H-paniculata_contig12464.1544.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12464 2981..3193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12464.1544.1 ID=prot_H-paniculata_contig12464.1544.1|Name=mRNA_H-paniculata_contig12464.1544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
NIQAVINITKRGLAALKDVTHLDDREANSLDLRPTPGLQYKRITLKVLLR
DEFAKADAVVQETYIYRIAA*
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