mRNA_H-paniculata_contig58766.13492.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI0019007968 (secreted RxLR effector protein 161-like n=1 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019007968) HSP 1 Score: 85.5 bits (210), Expect = 4.980e-19 Identity = 50/102 (49.02%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 1 NSTEYRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
NST Y+ MV SLMY +T TRPD YAV +R ME P + F KRI RYL P LGI + K L F D+ + D+ DRKST GY+ L GAIS
Sbjct: 27 NSTIYKQMVGSLMYLTT-TRPDIMYAVSLISRFMESPTELHFLAAKRILRYLKGTPGLGILY-QKGEKLNLVGFSDSDYVGDLNDRKSTPGYIFMLGSGAIS 126
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A0J7KC73_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KC73_LASNI) HSP 1 Score: 89.7 bits (221), Expect = 9.290e-19 Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 13 YRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
YR SL+Y +T+TRPD +YAV+ +R ++ P +DF KRIFRYL +LG+ +G + + L + D+ +A D E RKST GYV+K GG +S
Sbjct: 486 YRQAKGSLLYLTTKTRPDLSYAVNYYSRYIQSPESKDFLNVKRIFRYLQNTKELGLVYGGEKDTEKLTAYCDSDYAGDPETRKSTTGYVIKYCGGPVS 583
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A182GFL1_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GFL1_AEDAL) HSP 1 Score: 86.3 bits (212), Expect = 1.560e-18 Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 NSTEYRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAI 303
N+T+Y +V L+Y S TRPD A +V R + P Q D+ KRI RYL D + G K + L +VDA WA D +DRKST GY+L+LNGG+I
Sbjct: 4 NNTQYASLVGGLLYVSVNTRPDIAASVSILGRKVSCPSQADWVEAKRILRYLKHTLDHELILGIKPDP--LTVYVDADWAGDAKDRKSTSGYLLQLNGGSI 102
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A182G509_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G509_AEDAL) HSP 1 Score: 86.3 bits (212), Expect = 1.740e-18 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 13 YRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAI 303
YR ++ SLM+ + TRPD +A+ AR E+P QE + KR+ RYLS D+G+ F + + L +VDA WA D+ DRKST G+ +K+ G +
Sbjct: 13 YRELIGSLMFLMSGTRPDICFALTYLARFQENPTQEHWQCLKRVLRYLSGTIDVGLQFSKRDDEPALSCYVDADWANDLVDRKSTTGFFIKVYGNVV 109
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI000C1D1B8F (uncharacterized protein LOC111399822 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D1B8F) HSP 1 Score: 82.0 bits (201), Expect = 5.870e-18 Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 1 NSTEYRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
N+T Y+ +V SLMY T TRPD Y V +R M P + KR+ RY + DLG+ + + NG L F D+ +A DV+DRKST GYV L+ GA+S
Sbjct: 27 NATMYKQLVGSLMYL-TATRPDLMYVVSLISRFMASPTELHLQAAKRVLRYWKGIVDLGVFYQKEGNGE-LMAFTDSDYAGDVDDRKSTSGYVFLLSEGAVS 126
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI001D07F9B1 (secreted RxLR effector protein 161-like n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D07F9B1) HSP 1 Score: 82.0 bits (201), Expect = 6.680e-18 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 13 YRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEE---FVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
YR + SL+Y S +TRPD A+A++ +R EDP +D+ KR RYL D GI + K++G + E + D+ +A D+ DRKST GY++ N I+
Sbjct: 31 YREAIGSLLYLSCKTRPDLAFAINYESRFTEDPMNKDYKNIKRTLRYLQGTKDYGIYYKKKNDGKDVIELKVYCDSDYAGDLNDRKSTTGYIILYNDAPIN 131
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F) HSP 1 Score: 84.3 bits (207), Expect = 1.010e-17 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 13 YRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
Y+ V SL+Y STRTRPD A+AV A DP ++ ++ KRI RYL+ LG+ + K+ + DA WA D++DRKS GY+ K++G A+S
Sbjct: 27 YQSAVGSLLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLYS-KNTEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVS 123
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 86.7 bits (213), Expect = 1.120e-17 Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 13 YRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
Y+ V L+Y ST+TRPD AYAV AR DP +E + KRI RYL+ D+G+ + + DA WA D++DRKST GYV +++ AIS
Sbjct: 276 YQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAIS 373
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI001E279CF5 (secreted RxLR effector protein 161-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E279CF5) HSP 1 Score: 82.0 bits (201), Expect = 1.530e-17 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 4 STEYRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
S YR V SLMY + TRPD AYAV +AAR M +P ++++ KRIFRYL D G+ Y S+ + + DA A D+E R+ST G+V + G A+S
Sbjct: 27 SIPYRSAVGSLMYLACATRPDIAYAVSKAARSMSEPTYANWTSVKRIFRYLRGTSDQGLL--YTSSEDDVCAYSDADLAGDIETRRSTSGFVSLIGGTAVS 125
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A4Y1RXM4_PRUDU (Multidrug resistance-associated protein 9 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RXM4_PRUDU) HSP 1 Score: 86.3 bits (212), Expect = 1.550e-17 Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 1 NSTEYRGMVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHG-LEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 306
++TEY+ +V SL+Y T TRPD YAV +R ME P + KRI RYL +LGI GY+ G G L F D+ +A DV+DRKST GYV L GA+S
Sbjct: 687 DATEYKKLVGSLLYL-TATRPDLMYAVGLISRYMEKPTEMHLQAAKRILRYLKGTMELGI--GYRKGGKGSLIAFADSDYAGDVDDRKSTSGYVFMLGTGAVS 786 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig58766.13492.1 >prot_H-paniculata_contig58766.13492.1 ID=prot_H-paniculata_contig58766.13492.1|Name=mRNA_H-paniculata_contig58766.13492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp MVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDback to top mRNA from alignment at H-paniculata_contig58766:457..762- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig58766.13492.1 ID=mRNA_H-paniculata_contig58766.13492.1|Name=mRNA_H-paniculata_contig58766.13492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=306bp|location=Sequence derived from alignment at H-paniculata_contig58766:457..762- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig58766:457..762- >mRNA_H-paniculata_contig58766.13492.1 ID=mRNA_H-paniculata_contig58766.13492.1|Name=mRNA_H-paniculata_contig58766.13492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at H-paniculata_contig58766:457..762- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |