prot_H-paniculata_contig58766.13492.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig58766.13492.1
Unique Nameprot_H-paniculata_contig58766.13492.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A0J7KC73_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KC73_LASNI)

HSP 1 Score: 88.6 bits (218), Expect = 1.800e-18
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    4 SLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            SL+Y +T+TRPD +YAV+  +R ++ P  +DF   KRIFRYL    +LG+ +G + +   L  + D+ +A D E RKST GYV+K  GG +S
Sbjct:  492 SLLYLTTKTRPDLSYAVNYYSRYIQSPESKDFLNVKRIFRYLQNTKELGLVYGGEKDTEKLTAYCDSDYAGDPETRKSTTGYVIKYCGGPVS 583          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 85.9 bits (211), Expect = 1.590e-17
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    2 VRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            V  L+Y ST+TRPD AYAV   AR   DP +E +   KRI RYL+   D+G+ +           + DA WA D++DRKST GYV +++  AIS
Sbjct:  280 VGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAIS 373          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A182G509_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G509_AEDAL)

HSP 1 Score: 83.2 bits (204), Expect = 2.010e-17
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    1 MVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAI 94
            ++ SLM+  + TRPD  +A+   AR  E+P QE +   KR+ RYLS   D+G+ F  + +   L  +VDA WA D+ DRKST G+ +K+ G  +
Sbjct:   16 LIGSLMFLMSGTRPDICFALTYLARFQENPTQEHWQCLKRVLRYLSGTIDVGLQFSKRDDEPALSCYVDADWANDLVDRKSTTGFFIKVYGNVV 109          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F)

HSP 1 Score: 82.4 bits (202), Expect = 4.220e-17
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    2 VRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            V SL+Y STRTRPD A+AV   A    DP ++ ++  KRI RYL+    LG+ +  K+       + DA WA D++DRKS  GY+ K++G A+S
Sbjct:   31 VGSLLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLYS-KNTEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVS 123          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI001D07F9B1 (secreted RxLR effector protein 161-like n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D07F9B1)

HSP 1 Score: 79.3 bits (194), Expect = 5.870e-17
Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 0
Query:    2 VRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEE---FVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            + SL+Y S +TRPD A+A++  +R  EDP  +D+   KR  RYL    D GI +  K++G  + E   + D+ +A D+ DRKST GY++  N   I+
Sbjct:   35 IGSLLYLSCKTRPDLAFAINYESRFTEDPMNKDYKNIKRTLRYLQGTKDYGIYYKKKNDGKDVIELKVYCDSDYAGDLNDRKSTTGYIILYNDAPIN 131          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: UPI0019007968 (secreted RxLR effector protein 161-like n=1 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019007968)

HSP 1 Score: 79.3 bits (194), Expect = 9.800e-17
Identity = 46/95 (48.42%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    1 MVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            MV SLMY +T TRPD  YAV   +R ME P +  F   KRI RYL   P LGI +  K     L  F D+ +  D+ DRKST GY+  L  GAIS
Sbjct:   34 MVGSLMYLTT-TRPDIMYAVSLISRFMESPTELHFLAAKRILRYLKGTPGLGILY-QKGEKLNLVGFSDSDYVGDLNDRKSTPGYIFMLGSGAIS 126          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A0A9WIY3_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WIY3_LYGHE)

HSP 1 Score: 83.6 bits (205), Expect = 1.040e-16
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    2 VRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            V SL+Y ST+TRPD +YAV  + R +E P Q D    KR  +Y+ +  DLGI++        L  + D+ +A D E RKST GY++  NGG +S
Sbjct:  615 VGSLLYLSTKTRPDLSYAVSVSGRHVEKPTQSDLCNLKRTIKYVKSTKDLGISYLKTEQEAVLTAYCDSDYAGDQETRKSTTGYIIYFNGGPVS 708          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A0A9YZ93_LYGHE (Copia protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YZ93_LYGHE)

HSP 1 Score: 83.6 bits (205), Expect = 1.050e-16
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    2 VRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            V SL+Y ST+TRPD +YAV  + R +E P Q D    KR  +Y+ +  DLGI++        L  + D+ +A D E RKST GY++  NGG +S
Sbjct:  885 VGSLLYLSTKTRPDLSYAVSVSGRHVEKPTQSDLCNLKRTIKYVKSTKDLGISYLKTEQEAVLTAYCDSDYAGDQETRKSTTGYIIYFNGGPVS 978          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 83.2 bits (204), Expect = 1.400e-16
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 0
Query:    2 VRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            V  L+Y ST+TRPD AYAV   AR    P +E +   KRI RYL+   D+G+ +           + DA WA D++DRKST GYV +++  AIS
Sbjct:  428 VGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAIS 521          
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Match: A0A0A9X0L3_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X0L3_LYGHE)

HSP 1 Score: 79.7 bits (195), Expect = 1.850e-16
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    4 SLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPDLGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS 95
            SL+Y +T+TRPD A+AV    R +E+P ++D ++ KRI +YL+    LGIT+    +   L  + D+ +A DV  R+ST G+V+  +GG +S
Sbjct:    1 SLLYLTTKTRPDLAHAVSVCGRSVENPSRKDMTSIKRILKYLNGNTSLGITYSKAKSTDTLVAYSDSDYAGDVSTRRSTTGFVIFYSGGPVS 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig58766.13492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7KC73_LASNI1.800e-1844.57Integrase core domain protein n=1 Tax=Lasius niger... [more]
A0A7D9KES8_PARCT1.590e-1744.68Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A182G509_AEDAL2.010e-1740.43Uncharacterized protein n=2 Tax=Aedes albopictus T... [more]
UPI001C093D0F4.220e-1743.62LOW QUALITY PROTEIN: secreted RxLR effector protei... [more]
UPI001D07F9B15.870e-1739.18secreted RxLR effector protein 161-like n=1 Tax=Co... [more]
UPI00190079689.800e-1748.42secreted RxLR effector protein 161-like n=1 Tax=Be... [more]
A0A0A9WIY3_LYGHE1.040e-1642.55Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9YZ93_LYGHE1.050e-1642.55Copia protein (Fragment) n=1 Tax=Lygus hesperus Ta... [more]
A0A6S7JEY7_PARCT1.400e-1643.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9X0L3_LYGHE1.850e-1640.22Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..94
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig58766contigH-paniculata_contig58766:457..741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig58766.13492.1mRNA_H-paniculata_contig58766.13492.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig58766 457..762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig58766.13492.1 ID=prot_H-paniculata_contig58766.13492.1|Name=mRNA_H-paniculata_contig58766.13492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
MVRSLMYASTRTRPDTAYAVHQAARGMEDPCQEDFSTCKRIFRYLSTVPD
LGITFGYKSNGHGLEEFVDASWAEDVEDRKSTVGYVLKLNGGAIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like