prot_H-paniculata_contig5742.13303.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A401H317_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H317_9APHY) HSP 1 Score: 95.1 bits (235), Expect = 1.550e-20 Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 2 LYKRKVSKDGKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQAG 107
++K K DG++EK K R VA+GF Q+EG+ + E ++P AS+R LLA AA D E+ D + AFL D+DE + +++P + V KLNKA+YGL QAG
Sbjct: 916 VFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFRRSNSLVWKLNKALYGLKQAG 1021
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 94.7 bits (234), Expect = 2.110e-20 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 2 LYKRKVSKDGKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQAG 107
++K K DG++EK K R VA+GF Q+EG+ + E ++P AS+R LLA AA D E+ D + AFL D+DE + +++P + + KLNKA+YGL QAG
Sbjct: 652 VFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAG 757
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 94.7 bits (234), Expect = 2.140e-20 Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = 0
Query: 2 LYKRKVSKDGKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQAG 107
++K K DG++EK K R VA+GF Q+EG+ + E ++P AS+R LLA AA D E+ D + AFL D+DE + +++P V KLNKA+YGL QAG
Sbjct: 975 VFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAG 1080
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A401GM49_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GM49_9APHY) HSP 1 Score: 89.7 bits (221), Expect = 1.210e-18 Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0
Query: 2 LYKRKVSKDGKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQAG 107
++K K DG++EK K R VA+GF Q+EG+ + E ++P SIR LLA A D E+ D + AFL D+DE + + IP + + +LNKA+YGL QAG
Sbjct: 927 VFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFTSIRTLLALTAKLDLEIHQMDVKSAFLNGDLDEEIYMNIPPSFRKDNKLIWRLNKALYGLKQAG 1032
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A6H5KM90_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM90_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 1.470e-18 Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 2 LYKRKVSKDGKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQA 106
+Y RK + G + K R VA+GF Q EGV + E +SP P+ SIR+L A A D +L HFDAEQAF+++++DE V I + G V +L +++YGL QA
Sbjct: 168 VYSRKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLHPGCGALSGKVVRLRRSLYGLKQA 272
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 7.740e-18 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
Query: 2 LYKRKVSKDGKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQA 106
+Y K + G + K R VA+GF Q EGV + E +SP P+ SIR+L A A D +L HFDAEQAF+++++DE V I +P G V +L + +YGL QA
Sbjct: 829 VYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRGLYGLKQA 933
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 9.960e-18 Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 0
Query: 17 KCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQA 106
K R VA+GF Q EGV + E +SP P+ SIR+L A A D +L HFDAEQAF+++D+DE V I +P G V +L +++YGL QA
Sbjct: 117 KARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSDLDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQA 206
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A6H5KMK9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK9_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 1.670e-17 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 11 GKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQA 106
G + K R VA+GF Q EGV + E +SP P+ SIR+L A A D +L HFDAEQAF+++++DE V I +P G V +L +++YGL QA
Sbjct: 163 GYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQA 258
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 1.930e-17 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 11 GKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQA 106
G + K R VA+GF Q EGV + E +SP P+ SIR+L A A D +L HFDAEQAF+++++DE V I +P G V +L +++YGL QA
Sbjct: 361 GYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQA 456
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 1.940e-17 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 11 GKVEKCKCRPVAQGFLQIEGVHYTEKYSPTPATASIRMLLATAAAKDRELRHFDAEQAFLKTDIDEAVCIEIPERLQHFPGAVGKLNKAIYGLVQA 106
G + K R VA+GF Q EGV + E +SP P+ SIR+L A A D +L HFDAEQAF+++++DE V I +P G V +L +++YGL QA
Sbjct: 348 GYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQA 443 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5742.13303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5742.13303.1 ID=prot_H-paniculata_contig5742.13303.1|Name=mRNA_H-paniculata_contig5742.13303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bpback to top |