mRNA_H-paniculata_contig51895.12530.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 356 bits (914), Expect = 7.520e-116 Identity = 184/368 (50.00%), Postives = 250/368 (67.93%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMN 1101
+V+ +A+YGLKQ+GR W + LV N G Q K+DPCVFR K+ VV D ++VAG C L A+L F T GE W+ GCA RD+ G +RI+Q ++D++V RFDV++ S++PAS D+GP+R+DE + PVR A+GS++W+S +RP I AVR VA+HAH P++R WKA+VKI++YLK T+DLG+ +ERG L L+VYVDA YAD + RRSVSG+A +GG+V+S S TQ V+LS++EAEY+A +G K ALF RAVL F+ P+ SG I + EDNQGA A+ +NP S+ RSKHIDVRYHFIR L + +++ +Q AD+LTK L + S + HRR LMN
Sbjct: 141 VVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 369 bits (948), Expect = 2.660e-114 Identity = 191/371 (51.48%), Postives = 260/371 (70.08%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 1110
I + +A+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +RI+Q ++D++V+RFDV++ S +PA+ ADLGP+REDE+ + PVR A+GS++W+S +RP + AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+VVS S TQ V+LS++EAEY+A +G K ALF RAVL F+ P+ SG I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L + V++ +Q AD+LTK L R S + HRR LMNLPE
Sbjct: 878 IAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1246
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 369 bits (948), Expect = 1.220e-112 Identity = 191/371 (51.48%), Postives = 260/371 (70.08%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 1110
I + +A+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +RI+Q ++D++V+RFDV++ S +PA+ ADLGP+REDE+ + PVR A+GS++W+S +RP + AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+VVS S TQ V+LS++EAEY+A +G K ALF RAVL F+ P+ SG I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L + V++ +Q AD+LTK L R S + HRR LMNLPE
Sbjct: 1257 IAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1625
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 369 bits (948), Expect = 2.670e-112 Identity = 191/371 (51.48%), Postives = 260/371 (70.08%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 1110
I + +A+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +RI+Q ++D++V+RFDV++ S +PA+ ADLGP+REDE+ + PVR A+GS++W+S +RP + AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+VVS S TQ V+LS++EAEY+A +G K ALF RAVL F+ P+ SG I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L + V++ +Q AD+LTK L R S + HRR LMNLPE
Sbjct: 1420 IAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1788
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 352 bits (903), Expect = 5.580e-111 Identity = 185/371 (49.87%), Postives = 253/371 (68.19%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 1110
I + +A+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +RI+Q ++D++V+RFDV++ S +PA+ ADLGP+RED+ + PVR AVGS++W+S +RP + AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVS +A +GG+VVS S + V+LS++EAEY+A +G K ALF RAVL F+ P+ G I + EDNQGA A+ +NP S+G KHIDVR+HFIR L V++ +Q ADILT+ L R S + HRR LMNLPE
Sbjct: 469 IAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADTED-RRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSGDTSVKFVPTTEQHADILTQALSRASLQYHRRKLMNLPE 837
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE) HSP 1 Score: 345 bits (884), Expect = 5.670e-109 Identity = 179/358 (50.00%), Postives = 246/358 (68.72%), Query Frame = 1
Query: 40 AGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 1110
+GR W + LV N + Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +RI+Q ++D++V RFDV++ S +PA+ ADLGP+REDE+ + PVR A+GS++W+S +RP + AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+VVS S TQ V+LS+ EAEY+A +G K ALF RAVL F+ P+ G I + EDNQGA A+ +NP S+GR+ HIDVR+HFIR L + V++ +Q AD+LTK L + S + HRR LMNLPE
Sbjct: 402 SGRQWGYHAADTLVEN-RVEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSMEAEYIAAGEGVKEALFVRAVLLFVAPETRGSSIQVLEDNQGAMALVQNPLSSGRTTHIDVRFHFIRGLFGSGDISVKFVPTTEQHADLLTKALRKASLQYHRRKLMNLPE 757
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE) HSP 1 Score: 353 bits (905), Expect = 2.380e-106 Identity = 187/372 (50.27%), Postives = 252/372 (67.74%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGV-VRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 1110
+V+ +A+YGLKQ+GR W + LV N G Q K+DPCVFR K+ VV D ++VAG C L A+L F T GE W+ GCA RD+ G+ +RI+Q ++D +V RFDV++ S++PAS D+GP+R+DE + PVR A+GS++W+S +RP I AVR VA+HAH P++R WKA+VKI++YLK T+DLG+ +ERG L L VYVDA YAD + RRSVSG+A +GG+V+S S TQ V+LS++EAEY+A +G K ALF RAVL F+ P+ SG I + EDNQGA A+ +NP S+ RSKHIDVRYHFIR L + +++ +Q AD+LTK L + S + HRR LMNLPE
Sbjct: 1530 VVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGMTLRISQTAYID-IVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLEVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 1898
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE) HSP 1 Score: 325 bits (832), Expect = 6.860e-106 Identity = 174/370 (47.03%), Postives = 242/370 (65.41%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLP 1107
+V++ +A+Y LKQ+GR W + L+ N G Q + DPCVFR +G V ++ ++VDD++VA + + LFA+L +F GE WY GCA D+ G+ +++Q +V++++KRFDV T + PA+ ADLGP+R+DE DKPVR A+G L+W +TRP I + ++ K A +P+ R W A+V+I+SYL TKD G+ + RG L+LSV+VDA YAD RRS +G+AV +GG+VV A++ TQ STSEAEY+A +G K ALF R VL F+ P+ SG I + EDN+GA AM ENP S+ RSKHIDVR+HFIR+L + EY +Q AD+LTK L R E HR+ LMNLP
Sbjct: 5 VVKVERALYRLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPDIALPLNKLQKIAQSPTGRIWNALVRIMSYLNFTKDFGITYVRGSGLDLSVFVDASYADNEVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVLEDNKGALAMFENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKSEYHRKALMNLP 372
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 350 bits (899), Expect = 9.840e-106 Identity = 181/356 (50.84%), Postives = 249/356 (69.94%), Query Frame = 1
Query: 1 IVRLNKAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLER 1065
I + +A+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +RI+Q ++D++V+RFDV++ S +PA+ ADLGP+REDE+ + PVR A+GS++W+S +RP + AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA YAD + RRSVSG+A +GG+VVS S TQ V+LS++EAEY+A +G K ALF RAVL F+ P+ SG I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L + V++ +Q AD+LTK L R
Sbjct: 1277 IAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSR 1630
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE) HSP 1 Score: 345 bits (885), Expect = 4.080e-105 Identity = 180/366 (49.18%), Postives = 248/366 (67.76%), Query Frame = 1
Query: 16 KAMYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 1110
+A+YGLKQ+GR W + LV N G Q K+DPCVFR + V MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +RI+Q ++ ++VKRFDV++ S +PA+ DL P+REDE+ + P R A+GS++W+S + P + AVR VA+HAH P+ R W A+ K + YLK T+DLG+ ++RG L L++YVDA YAD + RRSVSG+A +GG+VVS S TQ V+LS++EAEY+A +G K ALF RAVL F+ P+ SG I + EDNQGA A+ +NP S+GR+KHIDV +HFIR L + V++ +Q AD+LTK L R S HRR LM LPE
Sbjct: 912 RAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVAVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKRFDVQSTSRIPATPGVDLVPKREDEEGGEWPRREAIGSMMWVSTFSLPDVSFAVRAVARHAHAPAKRHWDAIQKTLGYLKETRDLGIAYQRGSGLGLAMYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVTFHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRASLLYHRRKLMKLPE 1275 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig51895.12530.1 >prot_H-paniculata_contig51895.12530.1 ID=prot_H-paniculata_contig51895.12530.1|Name=mRNA_H-paniculata_contig51895.12530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=364bp MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHback to top mRNA from alignment at H-paniculata_contig51895:138..1250- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig51895.12530.1 ID=mRNA_H-paniculata_contig51895.12530.1|Name=mRNA_H-paniculata_contig51895.12530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1113bp|location=Sequence derived from alignment at H-paniculata_contig51895:138..1250- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig51895:138..1250- >mRNA_H-paniculata_contig51895.12530.1 ID=mRNA_H-paniculata_contig51895.12530.1|Name=mRNA_H-paniculata_contig51895.12530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2184bp|location=Sequence derived from alignment at H-paniculata_contig51895:138..1250- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |