prot_H-paniculata_contig51895.12530.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51895.12530.1
Unique Nameprot_H-paniculata_contig51895.12530.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length364
Homology
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 7.460e-114
Identity = 182/361 (50.42%), Postives = 245/361 (67.87%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMN 360
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR  K+ VV        D ++VAG    C  L A+L   F T   GE  W+ GCA  RD+  G +RI+Q  ++D++V RFDV++ S++PAS   D+GP+R+DE   + PVR A+GS++W+S  +RP I  AVR VA+HAH P++R WKA+VKI++YLK T+DLG+ +ERG  L L+VYVDA YAD  + RRSVSG+A  +GG+V+S  S TQ  V+LS++EAEY+A  +G K ALF RAVL F+ P+ SG  I + EDNQGA A+ +NP S+ RSKHIDVRYHFIR L     + +++    +Q AD+LTK L + S + HRR LMN
Sbjct:  148 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 7.910e-113
Identity = 189/364 (51.92%), Postives = 256/364 (70.33%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 363
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR   + VV MI+ ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++V+RFDV++ S +PA+  ADLGP+REDE+  + PVR A+GS++W+S  +RP +  AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG  L L+VYVDA YAD  + RRSVSG+A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K ALF RAVL F+ P+ SG  I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L     + V++    +Q AD+LTK L R S + HRR LMNLPE
Sbjct:  885 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1246          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 3.180e-111
Identity = 189/364 (51.92%), Postives = 256/364 (70.33%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 363
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR   + VV MI+ ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++V+RFDV++ S +PA+  ADLGP+REDE+  + PVR A+GS++W+S  +RP +  AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG  L L+VYVDA YAD  + RRSVSG+A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K ALF RAVL F+ P+ SG  I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L     + V++    +Q AD+LTK L R S + HRR LMNLPE
Sbjct: 1264 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1625          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 6.610e-111
Identity = 189/364 (51.92%), Postives = 256/364 (70.33%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 363
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR   + VV MI+ ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++V+RFDV++ S +PA+  ADLGP+REDE+  + PVR A+GS++W+S  +RP +  AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG  L L+VYVDA YAD  + RRSVSG+A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K ALF RAVL F+ P+ SG  I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L     + V++    +Q AD+LTK L R S + HRR LMNLPE
Sbjct: 1427 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1788          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 1.840e-109
Identity = 183/364 (50.27%), Postives = 249/364 (68.41%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 363
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR   + VV MI+ ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++V+RFDV++ S +PA+  ADLGP+RED+   + PVR AVGS++W+S  +RP +  AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG  L L+VYVDA YAD  + RRSVS +A  +GG+VVS  S  +  V+LS++EAEY+A  +G K ALF RAVL F+ P+  G  I + EDNQGA A+ +NP S+G  KHIDVR+HFIR L       V++    +Q ADILT+ L R S + HRR LMNLPE
Sbjct:  476 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADTED-RRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSGDTSVKFVPTTEQHADILTQALSRASLQYHRRKLMNLPE 837          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 4.420e-109
Identity = 179/358 (50.00%), Postives = 246/358 (68.72%), Query Frame = 0
Query:    7 AGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 363
            +GR W     + LV N  + Q K+DPCVFR   + VV MI+ ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++V RFDV++ S +PA+  ADLGP+REDE+  + PVR A+GS++W+S  +RP +  AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG  L L+VYVDA YAD  + RRSVSG+A  +GG+VVS  S TQ  V+LS+ EAEY+A  +G K ALF RAVL F+ P+  G  I + EDNQGA A+ +NP S+GR+ HIDVR+HFIR L     + V++    +Q AD+LTK L + S + HRR LMNLPE
Sbjct:  402 SGRQWGYHAADTLVEN-RVEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSMEAEYIAAGEGVKEALFVRAVLLFVAPETRGSSIQVLEDNQGAMALVQNPLSSGRTTHIDVRFHFIRGLFGSGDISVKFVPTTEQHADLLTKALRKASLQYHRRKLMNLPE 757          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 1.430e-104
Identity = 185/365 (50.68%), Postives = 247/365 (67.67%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGV-VRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 363
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR  K+ VV        D ++VAG    C  L A+L   F T   GE  W+ GCA  RD+  G+ +RI+Q  ++D +V RFDV++ S++PAS   D+GP+R+DE   + PVR A+GS++W+S  +RP I  AVR VA+HAH P++R WKA+VKI++YLK T+DLG+ +ERG  L L VYVDA YAD  + RRSVSG+A  +GG+V+S  S TQ  V+LS++EAEY+A  +G K ALF RAVL F+ P+ SG  I + EDNQGA A+ +NP S+ RSKHIDVRYHFIR L     + +++    +Q AD+LTK L + S + HRR LMNLPE
Sbjct: 1537 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGMTLRISQTAYID-IVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLEVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 1898          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 2.270e-104
Identity = 179/364 (49.18%), Postives = 246/364 (67.58%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLPE 363
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR   + V  MI+ ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++ ++VKRFDV++ S +PA+   DL P+REDE+  + P R A+GS++W+S  + P +  AVR VA+HAH P+ R W A+ K + YLK T+DLG+ ++RG  L L++YVDA YAD  + RRSVSG+A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K ALF RAVL F+ P+ SG  I + EDNQGA A+ +NP S+GR+KHIDV +HFIR L     + V++    +Q AD+LTK L R S   HRR LM LPE
Sbjct:  914 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVAVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKRFDVQSTSRIPATPGVDLVPKREDEEGGEWPRREAIGSMMWVSTFSLPDVSFAVRAVARHAHAPAKRHWDAIQKTLGYLKETRDLGIAYQRGSGLGLAMYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVTFHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRASLLYHRRKLMKLPE 1275          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 2.440e-104
Identity = 179/349 (51.29%), Postives = 245/349 (70.20%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLER 348
            +YGLKQ+GR W     + LV N G  Q K+DPCVFR   + VV MI+ ++VDD++VAG    C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++V+RFDV++ S +PA+  ADLGP+REDE+  + PVR A+GS++W+S  +RP +  AVR VA+HAH P+ R W A+ KI+ YLK T+DLG+ ++RG  L L+VYVDA YAD  + RRSVSG+A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K ALF RAVL F+ P+ SG  I + EDNQGA A+ +NP S+GR+KHIDVRYHFIR L     + V++    +Q AD+LTK L R
Sbjct: 1284 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSR 1630          
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 1.400e-103
Identity = 172/363 (47.38%), Postives = 236/363 (65.01%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSLIWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAENPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGSFERHRRFLMNLP 362
            +Y LKQ+GR W     + L+ N G  Q + DPCVFR   +G V  ++ ++VDD++VA    + + LFA+L  +F     GE  WY GCA   D+  G+ +++Q  +V++++KRFDV T +  PA+  ADLGP+R+DE   DKPVR A+G L+W   +TRP I   + ++ K A +P+ R W A+V+I+SYL  TKD G+ + RG  L+LSV+VDA YAD    RRS +G+AV +GG+VV A++ TQ     STSEAEY+A  +G K ALF R VL F+ P+ SG  I + EDN+GA AM ENP S+ RSKHIDVR+HFIR+L     +  EY    +Q AD+LTK L R   E HR+ LMNLP
Sbjct:   12 LYRLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPDIALPLNKLQKIAQSPTGRIWNALVRIMSYLNFTKDFGITYVRGSGLDLSVFVDASYADNEVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVLEDNKGALAMFENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKSEYHRKALMNLP 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51895.12530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG0_9PHAE7.460e-11450.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE7.910e-11351.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.180e-11151.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE6.610e-11151.92Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JQN6_9PHAE1.840e-10950.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K274_9PHAE4.420e-10950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LGF7_9PHAE1.430e-10450.68Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L060_9PHAE2.270e-10449.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JN00_9PHAE2.440e-10451.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWY8_9PHAE1.400e-10347.38Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..117
e-value: 3.6E-12
score: 46.4
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 142..352
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..317
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 142..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51895contigH-paniculata_contig51895:138..1229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51895.12530.1mRNA_H-paniculata_contig51895.12530.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51895 138..1250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51895.12530.1 ID=prot_H-paniculata_contig51895.12530.1|Name=mRNA_H-paniculata_contig51895.12530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=364bp
MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVH
VDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAFWRDIVRGVVRI
TQRTFVDTVVKRFDVETESNLPASQQADLGPRREDEDLSDKPVRSAVGSL
IWLSGMTRPYIPSAVREVAKHAHNPSDRFWKAVVKIISYLKRTKDLGLVF
ERGRDLNLSVYVDADYADKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTL
STSEAEYVAMAQGAKAALFTRAVLEFLQPQLSGRIITMFEDNQGAKAMAE
NPTSAGRSKHIDVRYHFIRQLIAREILRVEYKKGEDQPADILTKPLERGS
FERHRRFLMNLPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like