mRNA_H-paniculata_contig1178.1137.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438CLT8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CLT8_VITVI) HSP 1 Score: 197 bits (500), Expect = 8.690e-53 Identity = 134/346 (38.73%), Postives = 193/346 (55.78%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLS--DISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 G+KA+ KW +K K + DGS RYKA LV +GF Q E D+ + + V +MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C YF D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + RD++N K S+ + + VLS DI+ V SR S ++ I ++ RYL + D + F G S L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 577 GKKALHNKWVYKIKNEHDGSK-RYKARLVVKGFQQKESIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKVN--GTLKLSQSEYVKKVLSRPDIAHAVGVVSRFMSRPGKQHWEAIKWIL---------RYLKGSLDTCLCFTGASLK--LQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 905
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A075B0S6_ROZAC (Reverse transcriptase, RNA-dependent DNA polymerase domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0S6_ROZAC) HSP 1 Score: 189 bits (481), Expect = 3.930e-52 Identity = 130/385 (33.77%), Postives = 191/385 (49.61%), Query Frame = 1 Query: 4 RKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGL--LVAVYVDDLVIAGRREKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGY----------KPSKPKSLGDVLSDISAGV----QESSRGGSGNSTEYRSMIGPL----------------ILQYMQA-----------HFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 RK ++ +W F+ K DGSVARYKA LVA+G+ QV G+DF +T A VA+ +LRT+ S+ A D+E+E MDV A+L P + + P V +L +LYGL+QS R W L FL+ IG+ + D CLY TGL +++YVDD++IA ++ + K + RF+ +LG + LG++V+R+R+ RR K +K ++ V + + V + ++ N YRS+IG L IL Q H +YL+ G+ GG S L G+ D +WA D+ R+ST+ Y L I+WCS+ Q V SS EAEYV+ A +E I Sbjct: 155 RKIVKCRWVFRIKRHSDGSVARYKARLVAKGYSQVPGQDFSETYAPVAKYKSLRTMLSIAASRDYEIEQMDVVTAFL-IPSLKEEVYMEIPSGVAHDNKSGMVCKLNKALYGLRQSPRVWYEELHTFLISIGLTPTIADPCLY--------TGLNCYLSIYVDDIIIAAPKDIASDIKKKISSRFQSTDLGPIQHCLGLKVQRNRIERRLYLSQSRLAEHLLKETKMENSRFVKTPLDPNVILKRENATIKAQINDIPYRSIIGTLHHLAMCTRPDLANAVGILSRFQEGPSTVHLTALKHVLQYLNATKHYGLKLGGSSLT--LSGYADADWAGDLDSRRSTSGYCFFLGDACINWCSKLQASVALSSCEAEYVSLSLATQEAI 528
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU) HSP 1 Score: 195 bits (496), Expect = 5.070e-52 Identity = 141/388 (36.34%), Postives = 204/388 (52.58%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGR-REKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRL----------------------NRRSGYKPSKPKSLGDVLSD--ISAGVQESSRG-------GS--------GNSTEYRSMIGPLILQYMQA--HFFRYLSTAPDVGITF---GGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 GRK + KW FK K DGS+ +YKA LVA+GF QVEG D+ T A V++ +++RTV +L A +D +++ MDV +A+LN + P F D V RLR SLYGLKQ+SR W + +G +RS D + F + ++G L++A+YVDD++IAG R +D FK ++RF M +LGS +LG+E+ RDR N R P +P + LS+ I +S+ G GS G +++ + GP Q+ +A FRYL + D+ +++ SNG G+ D +WA DV R+ST+ L+ GA+SW S+KQQ + SSTEAEYVA A KE + Sbjct: 1029 GRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPG---FDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSI-FVKVENGVI-LIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKPYQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGP---QHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEAL 1408
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A177T2I3_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T2I3_9BASI) HSP 1 Score: 193 bits (490), Expect = 3.120e-51 Identity = 138/387 (35.66%), Postives = 195/387 (50.39%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNR---------------RSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLIL-------------------------QYMQA--HFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMIS 1032 G + KW FK K DGSV++YKA VA+G+ QVEG D+ +T A ARM+T+R + ++ A D EL D D AYLN P + P SR V RL +LYGLKQ+ R WN L + L +G +S TD+ L+ D + + + VYVDDL+IA + + E K QRF+ K+LG LLGIE+RRDR + R G KP L + S IS + + +T YR+++G L+ ++M A H R + D +TF G S+G + +VD +WA D RKST+ + + + A++W S+KQ V S+TEAEY+AAG AG+E I+ Sbjct: 874 GANILTGKWVFKIKRNPDGSVSKYKARFVARGYAQVEGVDYDETHAPTARMATVRAICAIAACDDLELSQFDYDTAYLNGPLHAKVYMH--PPEGTESRPGK-VWRLIKALYGLKQAGREWNLVLVELLTDLGFKQSKTDASLFVRTDP---SFVAIIVYVDDLIIAAAKGTDMGELKRQLAQRFKGKDLGEAHHLLGIEIRRDREKKILTMSQGRYAREVLARFGMSNCKPAKL-PMQSKISLMPRREGEPAADKAT-YRAIVGSLMYLVMGTRGDLAFYVSLLGRFASDPSEEHMAAAKHLMRNIKLTADAKLTFDG-SDGLRITAYVDADWAGDRSDRKSTSGFAILMAGAAVTWGSKKQTAVALSTTEAEYIAAGVAGREAIA 1251
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY) HSP 1 Score: 192 bits (487), Expect = 8.630e-51 Identity = 123/359 (34.26%), Postives = 188/359 (52.37%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAG-RREKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNR---------------RSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 GRKAI KW +K K + V RY+A LV +GF Q EG DF + + V R++T+R V ++ A D LE +DV A+L+ I P F V +L SLYGLKQ+ R W D F++ +G +R ++D C+Y+ R DG +++ +YVDD+++AG ++++ + K + F MK+LG ++LG+++ RDR NR R + KP + + + + SS N E M + + F + T PD+ G S+ + G+VD+++A D+ KST+ YV L GA+SW S+ Q +V S+TEAEYVAA +A KE I Sbjct: 836 GRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGE-LEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKP-----IPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSD-FTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAI 1186
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438GDP4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GDP4_VITVI) HSP 1 Score: 191 bits (486), Expect = 9.330e-51 Identity = 136/367 (37.06%), Postives = 192/367 (52.32%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 G+KA+ KW ++ K + DGS RYKA LV +GF Q EG D+ + + V +MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C YF D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + RD+ N R +KP S LG LS + E R + Y S IG L+ + + T PD VG+ S L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 641 GKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 994
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A5CBM1_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5CBM1_VITVI) HSP 1 Score: 190 bits (482), Expect = 3.520e-50 Identity = 134/372 (36.02%), Postives = 191/372 (51.34%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFG---------GKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 G+KA+ KW ++ K + DGS RYKA LV +GF Q EG D+ + + V +MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++I G EK++ K +++F MK+LG+ ++LG+ + RD+ N R +KP S LG LS + E R + Y S IG L+ + + T PD+ G GK + +EG+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 796 GKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIXGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSXPGKQHWEAVEGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1154
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438HYE0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HYE0_VITVI) HSP 1 Score: 189 bits (479), Expect = 8.660e-50 Identity = 135/367 (36.78%), Postives = 191/367 (52.04%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 G+KA+ KW ++ K + DGS RYKA LV +GF Q EG D+ + + V +MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + RD+ N R +KP S LG LS + E R + Y S IG L+ + + T PD VG+ S L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 747 GKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1100
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438JR94_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JR94_VITVI) HSP 1 Score: 180 bits (457), Expect = 2.070e-49 Identity = 123/348 (35.34%), Postives = 183/348 (52.59%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 G+KA+ KW ++ K + DGS RYKA L+ +GF Q EG D+ + + V +MST+R V + + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++I G EK++ K +++F MK+ G+ ++LG+ + RD+ N K S+ + + VLS N E + + PL + + + + T PD VG+ S L+ +VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYV A EAGKEMI Sbjct: 22 GKKALHNKWVYRIKNEHDGSK-RYKARLIVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVVAENLHLEQLDVKIAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDSGAGKQILGMRIIRDKAN--GTLKLSQSEYVKKVLSRF-------------NMNEAKPVSTPLAIGSLM---YAMVCTRPDIAHVVGVVSRFISASLKLQCYVDADFAGDIDSRKSTTGFVFTLGGIAISWASNLQKIVTLSTTEAEYVVATEAGKEMI 347
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A2N9IBB7_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IBB7_FAGSY) HSP 1 Score: 187 bits (476), Expect = 2.110e-49 Identity = 123/366 (33.61%), Postives = 188/366 (51.37%), Query Frame = 1 Query: 1 GRKAIRTKWFFKWKLKEDGSVARYKA*LVAQGFCQVEGEDFFQTSARVARMSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAG-RREKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNR---------------RSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKS-------NGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 1029 GRKAI KW +K K + V RY+A LV +GF Q EG DF + + V R++T+R V ++ A D LE +DV A+L+ I P F V +L SLYGLKQ+ R W D F++ +G +R ++D C+Y+ R DG +++ +YVDD+++AG ++++ + K + F MK+LG ++LG+++ RDR NR R + KP + + + + SS N E M + + F + T PD+ G S + + G+VD+++A D+ KST+ YV L GA+SW S+ Q +V S+TEAEYVAA +A KE I Sbjct: 681 GRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGE-LEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKP-----IPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGVVSRYMVNPGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAI 1039 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1178.1137.1 >prot_H-paniculata_contig1178.1137.1 ID=prot_H-paniculata_contig1178.1137.1|Name=mRNA_H-paniculata_contig1178.1137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bp MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDback to top mRNA from alignment at H-paniculata_contig1178:23178..24425- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1178.1137.1 ID=mRNA_H-paniculata_contig1178.1137.1|Name=mRNA_H-paniculata_contig1178.1137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig1178:23178..24425- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1178:23178..24425- >mRNA_H-paniculata_contig1178.1137.1 ID=mRNA_H-paniculata_contig1178.1137.1|Name=mRNA_H-paniculata_contig1178.1137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1770bp|location=Sequence derived from alignment at H-paniculata_contig1178:23178..24425- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |