prot_H-paniculata_contig1178.1137.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1178.1137.1
Unique Nameprot_H-paniculata_contig1178.1137.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length295
Homology
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438CLT8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CLT8_VITVI)

HSP 1 Score: 159 bits (402), Expect = 3.180e-40
Identity = 112/296 (37.84%), Postives = 162/296 (54.73%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLS--DISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  + A  +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C YF   D+    +++ +YVDD++IAG   EK++  K   +++F MK+LG+  ++LG+ + RD++N     K S+ + +  VLS  DI+  V   SR  S    ++   I  ++         RYL  + D  + F G S    L+G+VD ++A D+  RKSTT +V  L   AISW S  Q++VT S+TEAEYVAA EAGKEMI
Sbjct:  626 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKVN--GTLKLSQSEYVKKVLSRPDIAHAVGVVSRFMSRPGKQHWEAIKWIL---------RYLKGSLDTCLCFTGASLK--LQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 905          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438BPW0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BPW0_VITVI)

HSP 1 Score: 152 bits (385), Expect = 3.170e-38
Identity = 111/307 (36.16%), Postives = 160/307 (52.12%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLSDISAGVQE--SSRGGSGNSTEYRSMI-----------GPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  + A  +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C YF   D+    +++ +YVDD++IAG   EK++  K   +++F MK+LG+  ++LG+ + RD+ N     K S+ + +  VLS  +    +  S+  GS   T+ R++            G L L Y Q      +  A     T  G      L+G+VD ++A D+  RKSTT +V  L   AISW S  Q++VT S+TEAEYVAA EAGKEMI
Sbjct:  311 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKAN--GTLKLSQSEYVKKVLSRFNMNEAKLVSTPLGSHFKTKQRTVTKDRRRKRPYEQGALCLSYWQLDVCYGVYKARHC--TCSGSCASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 610          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A484K9G9_9ASTE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484K9G9_9ASTE)

HSP 1 Score: 147 bits (370), Expect = 4.780e-38
Identity = 106/296 (35.81%), Postives = 159/296 (53.72%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLS--DISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            M+++R +  L A  D ELE +DV  A+L+       I    P  F       FV +L+ SLYGLKQ+ R W +  D F+ G G  R+T D C+YF +  D +  +++ +YVDD++I G+  E +   K + ++ F MK+LG   ++LG+E+ RDR  +      S+ K +  VL   DI+  V        G  + + +  G +  + ++    RYL     + + FGG      LE F D + A D+  RKST+ Y+     GAISW S+ Q+ V  S+TEAEY+AA EAGKEMI
Sbjct:   71 MTSIRMILGLAACLDLELEQLDVKTAFLHGD-LDDEIYMEQPEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSGNGYRRTTADPCVYFRKFSD-DNFIILCLYVDDMLIVGQDVEMIRRLKEDMSKSFEMKDLGPGKQILGMEIVRDR--KAGKLWLSQEKYIERVLERPDIAHAV--------GLVSRFLANPGKIHWEAVK-WILRYLRGTSKLSLCFGGGEPI--LERFTDADMAGDLDNRKSTSGYLFTFAGGAISWQSKLQKCVALSTTEAEYIAAVEAGKEMI 351          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438GDP4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GDP4_VITVI)

HSP 1 Score: 152 bits (385), Expect = 6.200e-38
Identity = 114/317 (35.96%), Postives = 160/317 (50.47%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  + A  +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C YF   D+    +++ +YVDD++IAG   EK++  K   +++F MK+LG+  ++LG+ + RD+ N                R     +KP S  LG    LS   +   E  R    +   Y S IG L+        +  + T PD    VG+     S    L+G+VD ++A D+  RKSTT +V  L   AISW S  Q++VT S+TEAEYVAA EAGKEMI
Sbjct:  690 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 994          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438E4C5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4C5_VITVI)

HSP 1 Score: 146 bits (368), Expect = 1.540e-37
Identity = 111/317 (35.02%), Postives = 158/317 (49.84%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  + A  +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C Y    D+    +++ +YVDD++I G   EK++  K   +++F MK+LG+  ++LG+ + RD+ N                R     +KP S  LG    LS   +   E  R    +   Y S IG L+        +  + T PD    VG+     S    L+G+VD ++A D+  RKSTT +V  L   AISW S  Q++VT S+TEAEYVAA EAGKE+I
Sbjct:   46 MSTIRLVLGMVAVENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDYM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEII 350          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A5CBM1_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5CBM1_VITVI)

HSP 1 Score: 151 bits (381), Expect = 2.180e-37
Identity = 112/322 (34.78%), Postives = 159/322 (49.38%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFG---------GKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  + A  +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C Y    D+    +++ +YVDD++I G   EK++  K   +++F MK+LG+  ++LG+ + RD+ N                R     +KP S  LG    LS   +   E  R    +   Y S IG L+        +  + T PD+    G         GK +   +EG+VD ++A D+  RKSTT +V  L   AISW S  Q++VT S+TEAEYVAA EAGKEMI
Sbjct:  845 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIXGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSXPGKQHWEAVEGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1154          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438HYE0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HYE0_VITVI)

HSP 1 Score: 150 bits (378), Expect = 5.420e-37
Identity = 113/317 (35.65%), Postives = 159/317 (50.16%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  + A  +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C Y    D+    +++ +YVDD++IAG   EK++  K   +++F MK+LG+  ++LG+ + RD+ N                R     +KP S  LG    LS   +   E  R    +   Y S IG L+        +  + T PD    VG+     S    L+G+VD ++A D+  RKSTT +V  L   AISW S  Q++VT S+TEAEYVAA EAGKEMI
Sbjct:  796 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1100          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY)

HSP 1 Score: 149 bits (377), Expect = 8.200e-37
Identity = 99/309 (32.04%), Postives = 158/309 (51.13%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAG-RREKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNR---------------RSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            ++T+R V ++ A  D  LE +DV  A+L+       I    P  F        V +L  SLYGLKQ+ R W    D F++ +G +R ++D C+Y+ R  DG   +++ +YVDD+++AG  ++++ + K    + F MK+LG   ++LG+++ RDR NR               R   +  KP     + + +    + SS     N  E   M        + +  F  + T PD+    G  S+   + G+VD+++A D+   KST+ YV  L  GA+SW S+ Q +V  S+TEAEYVAA +A KE I
Sbjct:  886 LTTVRVVLAMCATFDLYLEQLDVKTAFLHGE-LEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKP-----IPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSD-FTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAI 1186          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438DRK3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DRK3_VITVI)

HSP 1 Score: 148 bits (373), Expect = 2.490e-36
Identity = 112/317 (35.33%), Postives = 160/317 (50.47%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  + A  +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C Y    D+    +++ +YVDD++IAG   EK++  K   +++F MK+LG+  ++LG+ + R++ N                R     +KP S  LG    LS   +   E  R    +   Y S IG L+        +  + T PD    VG+     S    L+G+VD ++A D+  RKSTT +V  L+  AISW S  Q++VT S+TEAEYVAA EAGKEMI
Sbjct:  765 MSTIRLVLGMVAVENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRNKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLSGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1069          
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438JR94_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JR94_VITVI)

HSP 1 Score: 142 bits (357), Expect = 1.690e-35
Identity = 102/298 (34.23%), Postives = 151/298 (50.67%), Query Frame = 0
Query:    1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293
            MST+R V  +    +  LE +DV  A+L+       +    P  F        V +LR SLYGLKQ+ R W    D+F+  IG  R   D C Y    D+    +++ +YVDD++I G   EK++  K   +++F MK+ G+  ++LG+ + RD+ N     K S+ + +  VLS               N  E + +  PL +  +    +  + T PD    VG+     S    L+ +VD ++A D+  RKSTT +V  L   AISW S  Q++VT S+TEAEYV A EAGKEMI
Sbjct:   71 MSTIRLVLGMVVAENLHLEQLDVKIAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDSGAGKQILGMRIIRDKAN--GTLKLSQSEYVKKVLSRF-------------NMNEAKPVSTPLAIGSLM---YAMVCTRPDIAHVVGVVSRFISASLKLQCYVDADFAGDIDSRKSTTGFVFTLGGIAISWASNLQKIVTLSTTEAEYVVATEAGKEMI 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438CLT8_VITVI3.180e-4037.84Retrovirus-related Pol polyprotein from transposon... [more]
A0A438BPW0_VITVI3.170e-3836.16Retrovirus-related Pol polyprotein from transposon... [more]
A0A484K9G9_9ASTE4.780e-3835.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438GDP4_VITVI6.200e-3835.96Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E4C5_VITVI1.540e-3735.02Retrovirus-related Pol polyprotein from transposon... [more]
A5CBM1_VITVI2.180e-3734.78Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A438HYE0_VITVI5.420e-3735.65Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9F319_FAGSY8.200e-3732.04Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A438DRK3_VITVI2.490e-3635.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JR94_VITVI1.690e-3534.23Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..153
e-value: 6.5E-29
score: 101.3
NoneNo IPR availablePANTHERPTHR11439:SF263coord: 55..197
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 55..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1178contigH-paniculata_contig1178:23178..24275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1178.1137.1mRNA_H-paniculata_contig1178.1137.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1178 23178..24425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1178.1137.1 ID=prot_H-paniculata_contig1178.1137.1|Name=mRNA_H-paniculata_contig1178.1137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bp
MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRD
MPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDD
GETGLLVAVYVDDLVIAGRREKVDEFKHNTTQRFRMKELGSLLRLLGIEV
RRDRLNRRSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGP
LILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKS
TTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like