prot_H-paniculata_contig1178.1137.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438CLT8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CLT8_VITVI) HSP 1 Score: 159 bits (402), Expect = 3.180e-40 Identity = 112/296 (37.84%), Postives = 162/296 (54.73%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLS--DISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C YF D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + RD++N K S+ + + VLS DI+ V SR S ++ I ++ RYL + D + F G S L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 626 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKVN--GTLKLSQSEYVKKVLSRPDIAHAVGVVSRFMSRPGKQHWEAIKWIL---------RYLKGSLDTCLCFTGASLK--LQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 905
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438BPW0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BPW0_VITVI) HSP 1 Score: 152 bits (385), Expect = 3.170e-38 Identity = 111/307 (36.16%), Postives = 160/307 (52.12%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLSDISAGVQE--SSRGGSGNSTEYRSMI-----------GPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C YF D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + RD+ N K S+ + + VLS + + S+ GS T+ R++ G L L Y Q + A T G L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 311 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKAN--GTLKLSQSEYVKKVLSRFNMNEAKLVSTPLGSHFKTKQRTVTKDRRRKRPYEQGALCLSYWQLDVCYGVYKARHC--TCSGSCASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 610
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A484K9G9_9ASTE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484K9G9_9ASTE) HSP 1 Score: 147 bits (370), Expect = 4.780e-38 Identity = 106/296 (35.81%), Postives = 159/296 (53.72%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLS--DISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 M+++R + L A D ELE +DV A+L+ I P F FV +L+ SLYGLKQ+ R W + D F+ G G R+T D C+YF + D + +++ +YVDD++I G+ E + K + ++ F MK+LG ++LG+E+ RDR + S+ K + VL DI+ V G + + + G + + ++ RYL + + FGG LE F D + A D+ RKST+ Y+ GAISW S+ Q+ V S+TEAEY+AA EAGKEMI Sbjct: 71 MTSIRMILGLAACLDLELEQLDVKTAFLHGD-LDDEIYMEQPEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSGNGYRRTTADPCVYFRKFSD-DNFIILCLYVDDMLIVGQDVEMIRRLKEDMSKSFEMKDLGPGKQILGMEIVRDR--KAGKLWLSQEKYIERVLERPDIAHAV--------GLVSRFLANPGKIHWEAVK-WILRYLRGTSKLSLCFGGGEPI--LERFTDADMAGDLDNRKSTSGYLFTFAGGAISWQSKLQKCVALSTTEAEYIAAVEAGKEMI 351
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438GDP4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GDP4_VITVI) HSP 1 Score: 152 bits (385), Expect = 6.200e-38 Identity = 114/317 (35.96%), Postives = 160/317 (50.47%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C YF D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + RD+ N R +KP S LG LS + E R + Y S IG L+ + + T PD VG+ S L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 690 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 994
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438E4C5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4C5_VITVI) HSP 1 Score: 146 bits (368), Expect = 1.540e-37 Identity = 111/317 (35.02%), Postives = 158/317 (49.84%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++I G EK++ K +++F MK+LG+ ++LG+ + RD+ N R +KP S LG LS + E R + Y S IG L+ + + T PD VG+ S L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKE+I Sbjct: 46 MSTIRLVLGMVAVENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDYM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEII 350
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A5CBM1_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5CBM1_VITVI) HSP 1 Score: 151 bits (381), Expect = 2.180e-37 Identity = 112/322 (34.78%), Postives = 159/322 (49.38%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFG---------GKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++I G EK++ K +++F MK+LG+ ++LG+ + RD+ N R +KP S LG LS + E R + Y S IG L+ + + T PD+ G GK + +EG+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 845 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIXGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSXPGKQHWEAVEGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1154
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438HYE0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HYE0_VITVI) HSP 1 Score: 150 bits (378), Expect = 5.420e-37 Identity = 113/317 (35.65%), Postives = 159/317 (50.16%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + RD+ N R +KP S LG LS + E R + Y S IG L+ + + T PD VG+ S L+G+VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 796 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1100
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY) HSP 1 Score: 149 bits (377), Expect = 8.200e-37 Identity = 99/309 (32.04%), Postives = 158/309 (51.13%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAG-RREKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNR---------------RSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPDVGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 ++T+R V ++ A D LE +DV A+L+ I P F V +L SLYGLKQ+ R W D F++ +G +R ++D C+Y+ R DG +++ +YVDD+++AG ++++ + K + F MK+LG ++LG+++ RDR NR R + KP + + + + SS N E M + + F + T PD+ G S+ + G+VD+++A D+ KST+ YV L GA+SW S+ Q +V S+TEAEYVAA +A KE I Sbjct: 886 LTTVRVVLAMCATFDLYLEQLDVKTAFLHGE-LEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKP-----IPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSD-FTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAI 1186
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438DRK3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DRK3_VITVI) HSP 1 Score: 148 bits (373), Expect = 2.490e-36 Identity = 112/317 (35.33%), Postives = 160/317 (50.47%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLN---------------RRSGYKPSKPKS--LGD--VLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + A + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++IAG EK++ K +++F MK+LG+ ++LG+ + R++ N R +KP S LG LS + E R + Y S IG L+ + + T PD VG+ S L+G+VD ++A D+ RKSTT +V L+ AISW S Q++VT S+TEAEYVAA EAGKEMI Sbjct: 765 MSTIRLVLGMVAVENLHLEQLDVKTAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRNKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHM-SKVPYASAIGSLM--------YAMVCTRPDIAHAVGVVSRFMSASLKLQGYVDADFAGDIDSRKSTTGFVFTLSGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMI 1069
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Match: A0A438JR94_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JR94_VITVI) HSP 1 Score: 142 bits (357), Expect = 1.690e-35 Identity = 102/298 (34.23%), Postives = 151/298 (50.67%), Query Frame = 0 Query: 1 MSTLRTVFSLTAEHDFELEGMDVDAAYLNAPGRRRAICSATPRVFPFSRDMPFVRRLRNSLYGLKQSSRNWNNALDDFLVGIGIDRSTTDSCLYFSRDDDGETGLLVAVYVDDLVIAGRR-EKVDEFKHNTTQRFRMKELGSLLRLLGIEVRRDRLNRRSGYKPSKPKSLGDVLSDISAGVQESSRGGSGNSTEYRSMIGPLILQYMQAHFFRYLSTAPD----VGITFGGKSNGHGLEGFVDTNWAEDVGGRKSTTVYVLKLNSGAISWCSRKQQLVTWSSTEAEYVAAGEAGKEMI 293 MST+R V + + LE +DV A+L+ + P F V +LR SLYGLKQ+ R W D+F+ IG R D C Y D+ +++ +YVDD++I G EK++ K +++F MK+ G+ ++LG+ + RD+ N K S+ + + VLS N E + + PL + + + + T PD VG+ S L+ +VD ++A D+ RKSTT +V L AISW S Q++VT S+TEAEYV A EAGKEMI Sbjct: 71 MSTIRLVLGMVVAENLHLEQLDVKIAFLHGD-LEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSY--IILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDSGAGKQILGMRIIRDKAN--GTLKLSQSEYVKKVLSRF-------------NMNEAKPVSTPLAIGSLM---YAMVCTRPDIAHVVGVVSRFISASLKLQCYVDADFAGDIDSRKSTTGFVFTLGGIAISWASNLQKIVTLSTTEAEYVVATEAGKEMI 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1178.1137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1178.1137.1 ID=prot_H-paniculata_contig1178.1137.1|Name=mRNA_H-paniculata_contig1178.1137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bpback to top |