prot_H-paniculata_contig41133.10597.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 7.320e-18 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPF-SRDIPFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVL 86
MDVD YL + +EE++++K PP + + S V RLRKSLYGLKQSGRNW+K +D + G G +TD CLY G GE ++
Sbjct: 342 MDVDTAYLQSDLEEKVYIKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSTDPCLYVKFGSSGEMEMV 428
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7TIT5_9STRA (Reverse transcriptase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIT5_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-17 Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPFSRDIP-FVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGE 82
MDVD YL + +EE+++VK PP + + V RLRKSLYGLKQSGRNW+K +D + G G + D CLY G GE
Sbjct: 1 MDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEVLVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYTKFGSSGE 83
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.640e-17 Identity = 43/90 (47.78%), Postives = 56/90 (62.22%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFS---PFSRDIPFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLV 87
MDVD YL + +EE+++VK PP + P ++ V RLRKSLYGLKQSGRNW+K +D + G G + D CLY G GE V+V
Sbjct: 84 MDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEMLVIV 171
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.000e-17 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPF-SRDIPFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLV 87
MDV+ YL + +EE+++VK PP + + S V RLRKSLYGLKQSGRNW+K +D + G G + D CLY G GE V+V
Sbjct: 84 MDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIV 171
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7TJI6_9STRA (Retrotransposon ty1-copia subclass n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJI6_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.760e-16 Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPP---EFSPFSRDIPFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLV 87
MDVD YL + +EE+++VK PP ++ P ++ + RL KSLYGLKQSGRNW+K +D++ G + D CLY G GE V+V
Sbjct: 126 MDVDTAYLQSDLEEKIYVKQPPGYEQYGPNGEEL--LCRLHKSLYGLKQSGRNWHKKIDEWFRGYCFHSSSADPCLYVKFGSSGEILVIV 213
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.240e-16 Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPFSRDI-PFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLV 87
MDVD YL + +EE++++K PP + + + V RLRKSLYGLKQSGRNW+K +D + G GL D CLY GE V+V
Sbjct: 304 MDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEILVIV 391
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7TH08_9STRA (RNA-dependent DNA polymerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH08_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.590e-16 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPFSRDI-PFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLV 87
MDVD YL + +EE++ +K PP + + + V RLRKSLYGLKQSGRNW+K +D + G + D CLY G GE ++V
Sbjct: 169 MDVDTAYLQSDLEEKVHIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYAFHPSSADPCLYVKFGSSGEMLIIV 256
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: A0A1M2VAF4_TRAPU (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VAF4_TRAPU) HSP 1 Score: 77.0 bits (188), Expect = 5.190e-16 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPFSRDIPFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLV 87
MDV A YLN ++EEL++ LPP+ + + RL++SLYGLKQ+GR WNKTLD L G+G +R +++CLY + G+ LV
Sbjct: 1 MDVSAAYLNGELDEELYL-LPPD--GVAIEPGHCWRLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLNSETCLYVFRDNKGQLCFLV 84
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.790e-16 Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPF-SRDIPFVRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLV 87
MDV+ YL + +EE+++VK P + + S V RLRKSLYGLKQSGRNW+K +D + G G + D CLY G GE V+V
Sbjct: 524 MDVETAYLQSDLEEKVYVKQPIGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIV 611
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Match: A0A7D9L0S1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L0S1_PARCT) HSP 1 Score: 78.6 bits (192), Expect = 6.250e-16 Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 0
Query: 1 MDVDATYLNAPVEEELFVKLPPEFSPFSRDIPF-VRRLRKSLYGLKQSGRNWNKTLDDFLVGIGLDRFTTDSCLYFSHGDGGETNVLVAV 89
MDV YLNAP++ EL+V+ P F+ +D + V +LRKSLYGLKQSGRNWN L LV G + +DSC+Y T V++ V
Sbjct: 91 MDVKTAYLNAPIDCELYVEQPEGFTMTGKDGEYLVYKLRKSLYGLKQSGRNWNSVLHSHLVSEGFIQSQSDSCVYTKISGKSMTIVIIWV 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41133.10597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig41133.10597.1 ID=prot_H-paniculata_contig41133.10597.1|Name=mRNA_H-paniculata_contig41133.10597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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