mRNA_H-paniculata_contig40168.10405.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig40168.10405.1
Unique NamemRNA_H-paniculata_contig40168.10405.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 165 bits (417), Expect = 2.010e-42
Identity = 107/298 (35.91%), Postives = 163/298 (54.70%), Query Frame = 1
Query:    7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-------------------------PATMGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
            + +K++F+ K   +G +  YKARLVAQ FSQ+ G  F +T APVA+++++R + +LAA HD+++  MDV  A+LN  +EEE+F+K PP  +   ++  +V  LR ++YGLKQS R W   +   L  +GL+RS  D C+ +                          A +  K  + +RF M DLG +  +LGIEVRRDR   T+++SQ +YI +G +     E A   S     GA+LS     +         +  YR  +GSLMY + GTRP+IA+AV   +  M++P R  +  
Sbjct: 1004 VGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYI-DGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEA 1299          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 162 bits (411), Expect = 1.270e-41
Identity = 104/293 (35.49%), Postives = 163/293 (55.63%), Query Frame = 1
Query:   16 KWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPAT-----------------------MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
            +++F+ K   DGS+ ++KARLVAQ ++Q+ G  F ET APVA++S++RT+ +LAA +D+ELE M+V +A+LN  ++EE++++ PP  +P   +   V  L+ +LYGLKQ+ R W  TL + +  +G  R  +D  + +                          M  K  +  RF M DLG++  +LGIEV+RDR   TI ISQ +YI     + +  E+A+  S     G VL+   + +        ++  YR  VGSLMY   GTRP+IA+AV   +  M++P R  +  
Sbjct: 1011 RFVFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKRAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNL-ETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEA 1301          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 162 bits (410), Expect = 1.740e-41
Identity = 112/294 (38.10%), Postives = 158/294 (53.74%), Query Frame = 1
Query:    7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFF--ETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGEKKTVC------------------------QRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCR 810
            + +K +F+ K   +G+V+ +KARLVAQ FSQV G  +   ET APV+R+ ++RT+ SLAA HD+EL  MDV +A+LN  +EE ++++LPP F+P  +    V RL+ +LYGLKQ+ R W  TL   +  +G  R   D  + +    GE   +                         QRF M DLG L  +LGIEVRRDR   TI ISQ SYI     + +  E+A  S      G+ L +  + +            YR  VGSLMY + GTRP+I +AV   +  M++P R
Sbjct: 1072 VGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE-GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQP-GSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGR 1362          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 160 bits (405), Expect = 7.970e-41
Identity = 109/285 (38.25%), Postives = 151/285 (52.98%), Query Frame = 1
Query:    4 AIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF------------------------PATMGE-KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNST---EYRGMVGSLMYTSTGTRPNIAYAV 774
            A+  KW+F+RK  ++G V +YKARLVAQ +SQ+ G  F ET APV R+ ++R + +LA  +++E+  MDV  A+LN  ++EE++++ P  F   S  I    RLR +LYGLKQS R WN  L   L  +G  R   D C++                         P  M E K+ +   F + DLG   +++GIE+ RDR  G I ISQ  YI E  LK    E+A      N++G  L    A T E      +      Y  MVGSLMY + GTRP+I+YAV
Sbjct:  950 AVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRIC---RLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYI-ESILKRYQLENA------NAVGMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAV 1224          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.050e-40
Identity = 101/294 (34.35%), Postives = 149/294 (50.68%), Query Frame = 1
Query:    1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPAT------------------------MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQN-SLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPC 807
            KAI +KW+FK K   +G + RYKARLVA+ F Q  G  F ET APVA+ +++R + S+AA++   L  MDV  A LN  +EEE+++K P  F   ++    V +L+ +LYGLKQS R WN T+D+F+  IG  +  TD C++                               K+ + +RF M DLG L   LG+EV RD   G +++ Q+ ++     K    +     + Q+  L    +    G +      G    YR  VG++MY   GTRP++A AV   +    DPC
Sbjct:   36 KAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQG--VPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPC 326          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A0V1GP69_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Trichinella TaxID=6333 RepID=A0A0V1GP69_9BILA)

HSP 1 Score: 155 bits (392), Expect = 3.790e-40
Identity = 104/294 (35.37%), Postives = 158/294 (53.74%), Query Frame = 1
Query:    1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-----------------------PATMGE-KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIRE--GKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDP 804
            KAI++KW+FK K KEDG++ + KARLVA+ +SQ++G  + +T AP    S+LR + SLAA+++ E++ MDV  A LN ++ EE++++LP      +       RLR S+YGLKQ+ R W   LDD L   GLNR   + C++F                        ++  E K  +C+RF+MKDLG     LGI + +D   GT++I Q  YI E   + ++S  +   T  + N    VLS       +   +  +S  YR  VG L+Y S   RP+I +AV   +   ++P
Sbjct:  157 KAIKSKWVFKTKYKEDGTIEKRKARLVARGYSQLQGIDYEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPTGVGDENNK---YCRLRKSIYGLKQASRAWYGMLDDTLRSFGLNRVKNEPCIYFLWKNKIFLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQEQYIEEMLHRFRMSDCKGVKTPLDPNQ---VLSKAMMPRSDEEIKQMHSVPYREAVGCLVYLSQSCRPDICHAVGIVSRFSDNP 444          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 158 bits (399), Expect = 5.040e-40
Identity = 104/298 (34.90%), Postives = 161/298 (54.03%), Query Frame = 1
Query:    7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-------------------------PATMGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
            + +K++F+ K   +G +  YKARLVAQ F+QV G  F ET APVA+++++R + +LAA +D+EL  MDV  A+LN  +EEE++++ PP  +   ++   V RL+  LYGLKQS R ++  +   L  +GL RS  D C+ +                          A    K+ +  RF M DLG +  +LGIEVRRDR   T+++SQ +YI     + +  ++   ++  +  G VLS     +         +  YR  +GSLMY + GTRP+IAYAV   +  M++P R  +  
Sbjct:  966 VGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDP-GTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEA 1261          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 157 bits (397), Expect = 9.270e-40
Identity = 105/295 (35.59%), Postives = 152/295 (51.53%), Query Frame = 1
Query:    7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLH--------------------FPAT----MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDF 819
            I  KW+F +K  EDG+++RYKARLVAQ +SQ+ G  + ET APV R+ ++R    +AA  D E+  MDV  A+LN  +EEE++++ P  +   S     V RLR +LYGLKQS R WN   D  L  IG ++   D C++                    F  T    M  K  +   F +KDLG   +++GIE++RDR  GTI++SQ  YI EG L     ++A   S       +L              G    Y+ ++GSL+Y + GTRP+I++AV        +P  E +
Sbjct:  923 IGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYI-EGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGG---YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHW 1210          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR)

HSP 1 Score: 157 bits (397), Expect = 9.300e-40
Identity = 103/294 (35.03%), Postives = 149/294 (50.68%), Query Frame = 1
Query:    7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATM--------------------GEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRS-GNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
            +  KW+FK K   +G++ R+KARLVA+ FSQ  G  +FET APVA+++T RT+F+LAA   +E+ GMDV  A+L   + EE+++  P  F         V RL  SLYGLKQ+ R WN  +  FL+ +G  RS  D CL+    +                      K  +   F MKDLG L   LG+ + R    G+I+I Q+ YIR+   +     S   S+           I  GT+   G +  N  +Y+ MVGSLMY    +RP++AYA+   +    +P    F+ 
Sbjct:  942 VTCKWVFKAKHDANGNIVRFKARLVARGFSQAYGVDYFETYAPVAKLTTYRTIFALAALEQWEIHGMDVITAYLLGKLNEEIYMMQPEGFVRMGMKRNMVCRLLRSLYGLKQAARVWNQKIHAFLIKLGFVRSNADPCLYIKKFLYITIWVDDLLIVGKNGRDIANVKGQLAGEFEMKDLGKLEYFLGMRIMRSLN-GSISIDQNGYIRQILERFGMEASKPVSTP----------IATGTRLVIGETESNIKQYQAMVGSLMYAMLCSRPDLAYAIQQLSQFNSNPTNAHFQA 1224          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A6S7IKL3_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IKL3_PARCT)

HSP 1 Score: 156 bits (395), Expect = 1.350e-39
Identity = 107/297 (36.03%), Postives = 157/297 (52.86%), Query Frame = 1
Query:    1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGE------------------------KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDF 819
            KA+ +KW+F+ K   DG+V  +KARLVAQ FSQ  G+ + ET +PVAR  ++RTV +LAA+H  +L  MDV  A LN  ++EE+++K P  F    ++   V RLR S+YGLK+S R WN+ LD  L  +G  ++T D C++     GE                        K+ + ++F+MKD+G L   LG++V +      I I Q +Y +   L+    ES+  +S   + G  L      +Q       +   Y+  VG L+Y ST TRP+IAYAV   A    DP  E +
Sbjct:  554 KAVGSKWVFRIKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIEKGKE-HLVCRLRRSIYGLKKSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEIFIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIQKPDSKEIWIGQEAYTK-SVLERFGMESSKPASTPVNPGTKLKKEADDSQRV-----DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHW 843          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GQU1_9APHY2.010e-4235.91Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A060S825_PYCCI1.270e-4135.49CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A2G8RWY5_9APHY1.740e-4138.10Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A401GYH9_9APHY7.970e-4138.25Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A5D6YB57_9STRA3.050e-4034.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0V1GP69_9BILA3.790e-4035.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GN13_9APHY5.040e-4034.90Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A284QR88_ARMOS9.270e-4035.59Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A535F6U2_9CHLR9.300e-4035.03DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A6S7IKL3_PARCT1.350e-3936.03Retrovirus-related Pol poly from transposon TNT 1-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40168contigH-paniculata_contig40168:43..997 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score157.5
Seed ortholog evalue8.8e-36
Seed eggNOG ortholog6334.EFV58419
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons3
Model size828
Cds size828
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40168.10405.1prot_H-paniculata_contig40168.10405.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig40168 43..997 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930230.1682627-CDS-H-paniculata_contig40168:42..5031622930230.1682627-CDS-H-paniculata_contig40168:42..503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40168 43..503 +
1691481201.1499207-CDS-H-paniculata_contig40168:42..5031691481201.1499207-CDS-H-paniculata_contig40168:42..503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40168 43..503 +
1622930230.1898093-CDS-H-paniculata_contig40168:577..6921622930230.1898093-CDS-H-paniculata_contig40168:577..692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40168 578..692 +
1691481201.1607928-CDS-H-paniculata_contig40168:577..6921691481201.1607928-CDS-H-paniculata_contig40168:577..692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40168 578..692 +
1622930230.2058775-CDS-H-paniculata_contig40168:745..9971622930230.2058775-CDS-H-paniculata_contig40168:745..997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40168 746..997 +
1691481201.173252-CDS-H-paniculata_contig40168:745..9971691481201.173252-CDS-H-paniculata_contig40168:745..997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig40168 746..997 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig40168.10405.1

>prot_H-paniculata_contig40168.10405.1 ID=prot_H-paniculata_contig40168.10405.1|Name=mRNA_H-paniculata_contig40168.10405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp
KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMS
TLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIP
FVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGEK
KTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAP
ESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGT
RPNIAYAVHHAALRMEDPCREDFRT*
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mRNA from alignment at H-paniculata_contig40168:43..997+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig40168.10405.1 ID=mRNA_H-paniculata_contig40168.10405.1|Name=mRNA_H-paniculata_contig40168.10405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=955bp|location=Sequence derived from alignment at H-paniculata_contig40168:43..997+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGCGATTCGTACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGG CAGCGTGGCACGCTACAAAGCGCGACTGGTCGCTCAAGATTTTTCACAGG TGGAGGGTGAAGCTTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCG ACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGA AGGTATGGACGTAGATGCGGCGCATCTGAACGTCGCGGTAGAAGAAGAGC TGTTTCTTAAGTTACCCCCCGAGTTTTCCCCTTTCTCCCGAGACATACCG TTTGTGCGCCGCCTGCGTTCAAGCCTGTACGGCCTCAAGCAGAGCGTCCG AAACTGGAATAACACTCTTGACGATTTTCTTGTTGGGATAGGACTCAACC GTTCCACTACCGACTCATGCTTGCACTTTCCCGCGACGATGGGGGAGAAA AAAACCGTCTGGTGGCCGTCTATGTTGACGACCTAGTCATTGCTGGCCGT CGTGAGAAAGTAGAGAAGTTCAAGCATAACATAAGTCAGCGTTTTAGGAT GAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTG ACCGCCCTATTGGTACCATAACCATCTCGCAGAGTAGCTACATCCGCGAG GTACTAAAAATATACGGTTTGACGAGCGTCGAGGGGTATCCACCCCTGTA GAGGGAAAACTGAAGATTTCGGCACCCGAGTCGGCCGACACGTCCTCCGA ACAAAACTCGCTTGGAGCTGTACTGTCGAGCATAGGCGCAGGAACACAAG AAAGCAGCGGGAGAAGTGGCAATTCAACTGAATATAGAGGCATGGTAGGA TCACTCATGTACACCTCGACAGGAACTAGACCTAATATAGCATACGCGGT ACACCACGCAGCACTTCGTATGGAGGACCCATGTCGGGAAGACTTCAGGA CATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig40168:43..997+

>mRNA_H-paniculata_contig40168.10405.1 ID=mRNA_H-paniculata_contig40168.10405.1|Name=mRNA_H-paniculata_contig40168.10405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1656bp|location=Sequence derived from alignment at H-paniculata_contig40168:43..997+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGCGATTCGTACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGG
CAGCGTGGCACGCTACAAAGCGCGACTGGTCGCTCAAGATTTTTCACAGG
TGGAGGGTGAAGCTTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCG
ACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGA
AGGTATGGACGTAGATGCGGCGCATCTGAACGTCGCGGTAGAAGAAGAGC
TGTTTCTTAAGTTACCCCCCGAGTTTTCCCCTTTCTCCCGAGACATACCG
TTTGTGCGCCGCCTGCGTTCAAGCCTGTACGGCCTCAAGCAGAGCGTCCG
AAACTGGAATAACACTCTTGACGATTTTCTTGTTGGGATAGGACTCAACC
GTTCCACTACCGACTCATGCTTGCACTTTCCCGCGACGATGGGGGAGAAA
AAAACCGTCTGAAGGCGATTCGTACGAAATGGATTTTCAAGCGGAAACTG
AAGGAGGACGGCAGCGTGGCACGCTACAAAGCGCGACTGGTCGCTCAAGA
TTTTTCACAGGTGGAGGGTGAAGCTTTCTTTGAAACCAGTGCCCCCGTAG
CTCGCATGTCGACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACATGAT
TTCGAATTAGAAGGTATGGACGTAGATGCGGCGCATCTGAACGTCGCGGT
AGAAGAAGAGCTGTTTCTTAAGTTACCCCCCGAGTTTTCCCCTTTCTCCC
GAGACATACCGTTTGTGCGCCGCCTGCGTTCAAGCCTGTACGGCCTCAAG
CAGAGCGTCCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTGGGAT
AGGACTCAACCGTTCCACTACCGACTCATGCTTGCACTTTCCCGCGACGA
TGGGGGAGAAAAAAACCGTCTGTCAGCGTTTTAGGATGAAAGACTTGGGC
TCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGACCGCCCTATTGG
TACCATAACCATCTCGCAGAGTAGCTACATCCGCGAGTCAGCGTTTTAGG
ATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACG
TGACCGCCCTATTGGTACCATAACCATCTCGCAGAGTAGCTACATCCGCG
AGGGAAAACTGAAGATTTCGGCACCCGAGTCGGCCGACACGTCCTCCGAA
CAAAACTCGCTTGGAGCTGTACTGTCGAGCATAGGCGCAGGAACACAAGA
AAGCAGCGGGAGAAGTGGCAATTCAACTGAATATAGAGGCATGGTAGGAT
CACTCATGTACACCTCGACAGGAACTAGACCTAATATAGCATACGCGGTA
CACCACGCAGCACTTCGTATGGAGGACCCATGTCGGGAAGACTTCAGGAC
ATGAGGAAAACTGAAGATTTCGGCACCCGAGTCGGCCGACACGTCCTCCG
AACAAAACTCGCTTGGAGCTGTACTGTCGAGCATAGGCGCAGGAACACAA
GAAAGCAGCGGGAGAAGTGGCAATTCAACTGAATATAGAGGCATGGTAGG
ATCACTCATGTACACCTCGACAGGAACTAGACCTAATATAGCATACGCGG
TACACCACGCAGCACTTCGTATGGAGGACCCATGTCGGGAAGACTTCAGG
ACATGA
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