mRNA_H-paniculata_contig40168.10405.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 165 bits (417), Expect = 2.010e-42 Identity = 107/298 (35.91%), Postives = 163/298 (54.70%), Query Frame = 1
Query: 7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-------------------------PATMGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
+ +K++F+ K +G + YKARLVAQ FSQ+ G F +T APVA+++++R + +LAA HD+++ MDV A+LN +EEE+F+K PP + ++ +V LR ++YGLKQS R W + L +GL+RS D C+ + A + K + +RF M DLG + +LGIEVRRDR T+++SQ +YI +G + E A S GA+LS + + YR +GSLMY + GTRP+IA+AV + M++P R +
Sbjct: 1004 VGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYI-DGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEA 1299
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI) HSP 1 Score: 162 bits (411), Expect = 1.270e-41 Identity = 104/293 (35.49%), Postives = 163/293 (55.63%), Query Frame = 1
Query: 16 KWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPAT-----------------------MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
+++F+ K DGS+ ++KARLVAQ ++Q+ G F ET APVA++S++RT+ +LAA +D+ELE M+V +A+LN ++EE++++ PP +P + V L+ +LYGLKQ+ R W TL + + +G R +D + + M K + RF M DLG++ +LGIEV+RDR TI ISQ +YI + + E+A+ S G VL+ + + ++ YR VGSLMY GTRP+IA+AV + M++P R +
Sbjct: 1011 RFVFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKRAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNL-ETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEA 1301
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 162 bits (410), Expect = 1.740e-41 Identity = 112/294 (38.10%), Postives = 158/294 (53.74%), Query Frame = 1
Query: 7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFF--ETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGEKKTVC------------------------QRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCR 810
+ +K +F+ K +G+V+ +KARLVAQ FSQV G + ET APV+R+ ++RT+ SLAA HD+EL MDV +A+LN +EE ++++LPP F+P + V RL+ +LYGLKQ+ R W TL + +G R D + + GE + QRF M DLG L +LGIEVRRDR TI ISQ SYI + + E+A S G+ L + + + YR VGSLMY + GTRP+I +AV + M++P R
Sbjct: 1072 VGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE-GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQP-GSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGR 1362
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 160 bits (405), Expect = 7.970e-41 Identity = 109/285 (38.25%), Postives = 151/285 (52.98%), Query Frame = 1
Query: 4 AIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF------------------------PATMGE-KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNST---EYRGMVGSLMYTSTGTRPNIAYAV 774
A+ KW+F+RK ++G V +YKARLVAQ +SQ+ G F ET APV R+ ++R + +LA +++E+ MDV A+LN ++EE++++ P F S I RLR +LYGLKQS R WN L L +G R D C++ P M E K+ + F + DLG +++GIE+ RDR G I ISQ YI E LK E+A N++G L A T E + Y MVGSLMY + GTRP+I+YAV
Sbjct: 950 AVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRIC---RLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYI-ESILKRYQLENA------NAVGMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAV 1224
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.050e-40 Identity = 101/294 (34.35%), Postives = 149/294 (50.68%), Query Frame = 1
Query: 1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPAT------------------------MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQN-SLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPC 807
KAI +KW+FK K +G + RYKARLVA+ F Q G F ET APVA+ +++R + S+AA++ L MDV A LN +EEE+++K P F ++ V +L+ +LYGLKQS R WN T+D+F+ IG + TD C++ K+ + +RF M DLG L LG+EV RD G +++ Q+ ++ K + + Q+ L + G + G YR VG++MY GTRP++A AV + DPC
Sbjct: 36 KAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQG--VPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPC 326
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A0V1GP69_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Trichinella TaxID=6333 RepID=A0A0V1GP69_9BILA) HSP 1 Score: 155 bits (392), Expect = 3.790e-40 Identity = 104/294 (35.37%), Postives = 158/294 (53.74%), Query Frame = 1
Query: 1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-----------------------PATMGE-KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIRE--GKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDP 804
KAI++KW+FK K KEDG++ + KARLVA+ +SQ++G + +T AP S+LR + SLAA+++ E++ MDV A LN ++ EE++++LP + RLR S+YGLKQ+ R W LDD L GLNR + C++F ++ E K +C+RF+MKDLG LGI + +D GT++I Q YI E + ++S + T + N VLS + + +S YR VG L+Y S RP+I +AV + ++P
Sbjct: 157 KAIKSKWVFKTKYKEDGTIEKRKARLVARGYSQLQGIDYEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPTGVGDENNK---YCRLRKSIYGLKQASRAWYGMLDDTLRSFGLNRVKNEPCIYFLWKNKIFLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQEQYIEEMLHRFRMSDCKGVKTPLDPNQ---VLSKAMMPRSDEEIKQMHSVPYREAVGCLVYLSQSCRPDICHAVGIVSRFSDNP 444
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 158 bits (399), Expect = 5.040e-40 Identity = 104/298 (34.90%), Postives = 161/298 (54.03%), Query Frame = 1
Query: 7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-------------------------PATMGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
+ +K++F+ K +G + YKARLVAQ F+QV G F ET APVA+++++R + +LAA +D+EL MDV A+LN +EEE++++ PP + ++ V RL+ LYGLKQS R ++ + L +GL RS D C+ + A K+ + RF M DLG + +LGIEVRRDR T+++SQ +YI + + ++ ++ + G VLS + + YR +GSLMY + GTRP+IAYAV + M++P R +
Sbjct: 966 VGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDP-GTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEA 1261
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 157 bits (397), Expect = 9.270e-40 Identity = 105/295 (35.59%), Postives = 152/295 (51.53%), Query Frame = 1
Query: 7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLH--------------------FPAT----MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDF 819
I KW+F +K EDG+++RYKARLVAQ +SQ+ G + ET APV R+ ++R +AA D E+ MDV A+LN +EEE++++ P + S V RLR +LYGLKQS R WN D L IG ++ D C++ F T M K + F +KDLG +++GIE++RDR GTI++SQ YI EG L ++A S +L G Y+ ++GSL+Y + GTRP+I++AV +P E +
Sbjct: 923 IGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYI-EGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGG---YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHW 1210
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR) HSP 1 Score: 157 bits (397), Expect = 9.300e-40 Identity = 103/294 (35.03%), Postives = 149/294 (50.68%), Query Frame = 1
Query: 7 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATM--------------------GEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRS-GNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 825
+ KW+FK K +G++ R+KARLVA+ FSQ G +FET APVA+++T RT+F+LAA +E+ GMDV A+L + EE+++ P F V RL SLYGLKQ+ R WN + FL+ +G RS D CL+ + K + F MKDLG L LG+ + R G+I+I Q+ YIR+ + S S+ I GT+ G + N +Y+ MVGSLMY +RP++AYA+ + +P F+
Sbjct: 942 VTCKWVFKAKHDANGNIVRFKARLVARGFSQAYGVDYFETYAPVAKLTTYRTIFALAALEQWEIHGMDVITAYLLGKLNEEIYMMQPEGFVRMGMKRNMVCRLLRSLYGLKQAARVWNQKIHAFLIKLGFVRSNADPCLYIKKFLYITIWVDDLLIVGKNGRDIANVKGQLAGEFEMKDLGKLEYFLGMRIMRSLN-GSISIDQNGYIRQILERFGMEASKPVSTP----------IATGTRLVIGETESNIKQYQAMVGSLMYAMLCSRPDLAYAIQQLSQFNSNPTNAHFQA 1224
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A6S7IKL3_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IKL3_PARCT) HSP 1 Score: 156 bits (395), Expect = 1.350e-39 Identity = 107/297 (36.03%), Postives = 157/297 (52.86%), Query Frame = 1
Query: 1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGE------------------------KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDF 819
KA+ +KW+F+ K DG+V +KARLVAQ FSQ G+ + ET +PVAR ++RTV +LAA+H +L MDV A LN ++EE+++K P F ++ V RLR S+YGLK+S R WN+ LD L +G ++T D C++ GE K+ + ++F+MKD+G L LG++V + I I Q +Y + L+ ES+ +S + G L +Q + Y+ VG L+Y ST TRP+IAYAV A DP E +
Sbjct: 554 KAVGSKWVFRIKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIEKGKE-HLVCRLRRSIYGLKKSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEIFIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIQKPDSKEIWIGQEAYTK-SVLERFGMESSKPASTPVNPGTKLKKEADDSQRV-----DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHW 843 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40168.10405.1 >prot_H-paniculata_contig40168.10405.1 ID=prot_H-paniculata_contig40168.10405.1|Name=mRNA_H-paniculata_contig40168.10405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSback to top mRNA from alignment at H-paniculata_contig40168:43..997+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40168.10405.1 ID=mRNA_H-paniculata_contig40168.10405.1|Name=mRNA_H-paniculata_contig40168.10405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=955bp|location=Sequence derived from alignment at H-paniculata_contig40168:43..997+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40168:43..997+ >mRNA_H-paniculata_contig40168.10405.1 ID=mRNA_H-paniculata_contig40168.10405.1|Name=mRNA_H-paniculata_contig40168.10405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1656bp|location=Sequence derived from alignment at H-paniculata_contig40168:43..997+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |