prot_H-paniculata_contig40168.10405.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40168.10405.1
Unique Nameprot_H-paniculata_contig40168.10405.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length276
Homology
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A6A4ZM73_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZM73_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.850e-44
Identity = 111/302 (36.75%), Postives = 158/302 (52.32%), Query Frame = 0
Query:    1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDI---PFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGE------------------------KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 275
            KAI +KW+FK K K DGS+ ++KARLVA+ FSQ  G  + ET APVA+ +++R + SLAA++  +L+ MDV  A LN  ++EE+++K+P      + D    P V RL+ SLYGLKQ+ R WN T DDF++  G N+S  D C++   T  +                        K  +  RF+M DLGSL   LGI+V R    G++ I Q  +++   +K          + Q   G  LS   +   E       S  YR  VG LMY    TRP+IA AV  A+  +E P R+ +  
Sbjct:  344 KAIGSKWVFKVKEKADGSIDKFKARLVAKGFSQQYGVDYEETFAPVAKFASIRILLSLAAQYSLDLQQMDVKTAFLNGTLDEEIYMKIPEGLDVNNGDSKSGPLVLRLKKSLYGLKQAPRLWNKTFDDFMLSNGFNKSEADHCIYSKRTDDDLMFISLYVDDLIMASNCPRLMKATKNALHGRFKMSDLGSLQYCLGIQVERSTS-GSVFIHQQKFLQSVLVKFRMEHCKPVKTPQEP-GQRLSKTMSPVTEEEHLDMESVPYRSAVGCLMYLMVATRPDIATAVGAASQFLERPGRQHWNA 643          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: UPI001C91A683 (hypothetical protein n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C91A683)

HSP 1 Score: 158 bits (399), Expect = 1.400e-42
Identity = 107/298 (35.91%), Postives = 154/298 (51.68%), Query Frame = 0
Query:    1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGE-------------------------KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDF 273
            KAI  KW+FK+K   +G + +YKARLVA+ ++Q+EG  + E  +PVA+++++RTV S AA +D E+E MDV  A L+  +EEE+++K P  F    ++   V +L  SLYGLKQS R W    D +   IG  RS  D C++     GE                         K  + ++F MKDLG+ + +LG+ +RRDR    + + Q  YI EG LK              S+G  LS+  +   E       S  Y   VGSLMY    TRP+IA AV   +  M +P +E +
Sbjct:    3 KAIGCKWVFKKKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVLSAAAAYDLEIEQMDVKTAFLHGDLEEEIYMKQPEGFVARGKE-NLVCKLEKSLYGLKQSPRMWYQKFDSYAQQIGFTRSHADHCVYVKRE-GEMFVILTLYVDDMLLIGNSTKMIRTVKDLLAKQFEMKDLGAANFILGMHIRRDRARRRLWLGQERYI-EGILKKFNMTDCKPVGTPMSVGVKLSAEQSPQNEEEKEQMASIPYASAVGSLMYAMVCTRPDIAQAVGVLSRYMSNPGKEHW 297          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 165 bits (417), Expect = 2.010e-42
Identity = 107/298 (35.91%), Postives = 163/298 (54.70%), Query Frame = 0
Query:    3 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-------------------------PATMGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 275
            + +K++F+ K   +G +  YKARLVAQ FSQ+ G  F +T APVA+++++R + +LAA HD+++  MDV  A+LN  +EEE+F+K PP  +   ++  +V  LR ++YGLKQS R W   +   L  +GL+RS  D C+ +                          A +  K  + +RF M DLG +  +LGIEVRRDR   T+++SQ +YI +G +     E A   S     GA+LS     +         +  YR  +GSLMY + GTRP+IA+AV   +  M++P R  +  
Sbjct: 1004 VGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYI-DGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEA 1299          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 162 bits (411), Expect = 1.270e-41
Identity = 104/293 (35.49%), Postives = 163/293 (55.63%), Query Frame = 0
Query:    6 KWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPAT-----------------------MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 275
            +++F+ K   DGS+ ++KARLVAQ ++Q+ G  F ET APVA++S++RT+ +LAA +D+ELE M+V +A+LN  ++EE++++ PP  +P   +   V  L+ +LYGLKQ+ R W  TL + +  +G  R  +D  + +                          M  K  +  RF M DLG++  +LGIEV+RDR   TI ISQ +YI     + +  E+A+  S     G VL+   + +        ++  YR  VGSLMY   GTRP+IA+AV   +  M++P R  +  
Sbjct: 1011 RFVFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKRAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNL-ETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEA 1301          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 162 bits (410), Expect = 1.740e-41
Identity = 112/294 (38.10%), Postives = 158/294 (53.74%), Query Frame = 0
Query:    3 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFF--ETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGEKKTVC------------------------QRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCR 270
            + +K +F+ K   +G+V+ +KARLVAQ FSQV G  +   ET APV+R+ ++RT+ SLAA HD+EL  MDV +A+LN  +EE ++++LPP F+P  +    V RL+ +LYGLKQ+ R W  TL   +  +G  R   D  + +    GE   +                         QRF M DLG L  +LGIEVRRDR   TI ISQ SYI     + +  E+A  S      G+ L +  + +            YR  VGSLMY + GTRP+I +AV   +  M++P R
Sbjct: 1072 VGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE-GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQP-GSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGR 1362          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 160 bits (405), Expect = 7.970e-41
Identity = 109/285 (38.25%), Postives = 151/285 (52.98%), Query Frame = 0
Query:    2 AIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF------------------------PATMGE-KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNST---EYRGMVGSLMYTSTGTRPNIAYAV 258
            A+  KW+F+RK  ++G V +YKARLVAQ +SQ+ G  F ET APV R+ ++R + +LA  +++E+  MDV  A+LN  ++EE++++ P  F   S  I    RLR +LYGLKQS R WN  L   L  +G  R   D C++                         P  M E K+ +   F + DLG   +++GIE+ RDR  G I ISQ  YI E  LK    E+A      N++G  L    A T E      +      Y  MVGSLMY + GTRP+I+YAV
Sbjct:  950 AVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRIC---RLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYI-ESILKRYQLENA------NAVGMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAV 1224          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.050e-40
Identity = 101/294 (34.35%), Postives = 149/294 (50.68%), Query Frame = 0
Query:    1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPAT------------------------MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQN-SLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPC 269
            KAI +KW+FK K   +G + RYKARLVA+ F Q  G  F ET APVA+ +++R + S+AA++   L  MDV  A LN  +EEE+++K P  F   ++    V +L+ +LYGLKQS R WN T+D+F+  IG  +  TD C++                               K+ + +RF M DLG L   LG+EV RD   G +++ Q+ ++     K    +     + Q+  L    +    G +      G    YR  VG++MY   GTRP++A AV   +    DPC
Sbjct:   36 KAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQG--VPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPC 326          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A0V1GP69_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Trichinella TaxID=6333 RepID=A0A0V1GP69_9BILA)

HSP 1 Score: 155 bits (392), Expect = 3.790e-40
Identity = 104/294 (35.37%), Postives = 158/294 (53.74%), Query Frame = 0
Query:    1 KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-----------------------PATMGE-KKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIRE--GKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDP 268
            KAI++KW+FK K KEDG++ + KARLVA+ +SQ++G  + +T AP    S+LR + SLAA+++ E++ MDV  A LN ++ EE++++LP      +       RLR S+YGLKQ+ R W   LDD L   GLNR   + C++F                        ++  E K  +C+RF+MKDLG     LGI + +D   GT++I Q  YI E   + ++S  +   T  + N    VLS       +   +  +S  YR  VG L+Y S   RP+I +AV   +   ++P
Sbjct:  157 KAIKSKWVFKTKYKEDGTIEKRKARLVARGYSQLQGIDYEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPTGVGDENNK---YCRLRKSIYGLKQASRAWYGMLDDTLRSFGLNRVKNEPCIYFLWKNKIFLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQEQYIEEMLHRFRMSDCKGVKTPLDPNQ---VLSKAMMPRSDEEIKQMHSVPYREAVGCLVYLSQSCRPDICHAVGIVSRFSDNP 444          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 158 bits (399), Expect = 5.040e-40
Identity = 104/298 (34.90%), Postives = 161/298 (54.03%), Query Frame = 0
Query:    3 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHF-------------------------PATMGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDFRT 275
            + +K++F+ K   +G +  YKARLVAQ F+QV G  F ET APVA+++++R + +LAA +D+EL  MDV  A+LN  +EEE++++ PP  +   ++   V RL+  LYGLKQS R ++  +   L  +GL RS  D C+ +                          A    K+ +  RF M DLG +  +LGIEVRRDR   T+++SQ +YI     + +  ++   ++  +  G VLS     +         +  YR  +GSLMY + GTRP+IAYAV   +  M++P R  +  
Sbjct:  966 VGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDP-GTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEA 1261          
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 157 bits (397), Expect = 9.270e-40
Identity = 105/295 (35.59%), Postives = 152/295 (51.53%), Query Frame = 0
Query:    3 IRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIPFVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLH--------------------FPAT----MGEKKTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAPESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGTRPNIAYAVHHAALRMEDPCREDF 273
            I  KW+F +K  EDG+++RYKARLVAQ +SQ+ G  + ET APV R+ ++R    +AA  D E+  MDV  A+LN  +EEE++++ P  +   S     V RLR +LYGLKQS R WN   D  L  IG ++   D C++                    F  T    M  K  +   F +KDLG   +++GIE++RDR  GTI++SQ  YI EG L     ++A   S       +L              G    Y+ ++GSL+Y + GTRP+I++AV        +P  E +
Sbjct:  923 IGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYI-EGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGG---YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHW 1210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40168.10405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4ZM73_9STRA3.850e-4436.75Integrase catalytic domain-containing protein (Fra... [more]
UPI001C91A6831.400e-4235.91hypothetical protein n=1 Tax=Modestobacter lapidis... [more]
A0A401GQU1_9APHY2.010e-4235.91Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A060S825_PYCCI1.270e-4135.49CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A2G8RWY5_9APHY1.740e-4138.10Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A401GYH9_9APHY7.970e-4138.25Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A5D6YB57_9STRA3.050e-4034.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0V1GP69_9BILA3.790e-4035.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GN13_9APHY5.040e-4034.90Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A284QR88_ARMOS9.270e-4035.59Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..145
e-value: 1.1E-34
score: 120.1
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..138
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40168contigH-paniculata_contig40168:43..997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40168.10405.1mRNA_H-paniculata_contig40168.10405.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40168 43..997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40168.10405.1 ID=prot_H-paniculata_contig40168.10405.1|Name=mRNA_H-paniculata_contig40168.10405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp
KAIRTKWIFKRKLKEDGSVARYKARLVAQDFSQVEGEAFFETSAPVARMS
TLRTVFSLAAEHDFELEGMDVDAAHLNVAVEEELFLKLPPEFSPFSRDIP
FVRRLRSSLYGLKQSVRNWNNTLDDFLVGIGLNRSTTDSCLHFPATMGEK
KTVCQRFRMKDLGSLSRVLGIEVRRDRPIGTITISQSSYIREGKLKISAP
ESADTSSEQNSLGAVLSSIGAGTQESSGRSGNSTEYRGMVGSLMYTSTGT
RPNIAYAVHHAALRMEDPCREDFRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like