mRNA_H-paniculata_contig39910.10339.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 112 bits (280), Expect = 1.140e-25 Identity = 58/166 (34.94%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLGAVGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
WQ A E E L+ G W + + + +V + ++ +K E GKV + K RLVA G QI + SP + ++L+ I+DW++R +DI+ AYL +++ F+E P + + G V RL +YG Q GR W+ K+ LTT GF ++ ADPCV+
Sbjct: 870 WQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVY 1035
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A1Y1M2G6_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1M2G6_PHOPY) HSP 1 Score: 109 bits (273), Expect = 9.960e-25 Identity = 54/169 (31.95%), Postives = 99/169 (58.58%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLGA---VGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W A + E ++LI W V+ P++ ++ +M I+KRK + G++ + K RLVA GN Q K ++K+ SP + ++L+++ ++W++ H+D+ AYL A +D+ +++EIP + E L V L K++YG Q G W+ ++ L G ++S+ DPC++
Sbjct: 859 WHEAIQEEYENLISNDTWNIVERPRDAKILRSMWIFKRKYDDCGRIMKYKARLVALGNHQTKYVDYEKSFSPVIMRKTMRILLAISVRKNWEINHIDVNCAYLNARLDEETYMEIPDGFDENLNKKKYVCELKKSLYGLHQSGYLWNQEINEFLKKMGMQRSRMDPCLY 1027
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A507DAW5_9FUNG (DNA-directed DNA polymerase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507DAW5_9FUNG) HSP 1 Score: 106 bits (265), Expect = 1.140e-23 Identity = 57/166 (34.34%), Postives = 92/166 (55.42%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLGAVGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W +AE+AEL L + ++ +P + ++ + +YK K+ DG V+R K RLVA G Q + + SP +A+ +L+L + W R +DI AYL ++ +++ P + + G V +L K +YG Q GR W +K+ T L ++G+ QS ADPCVF
Sbjct: 473 WIKAEQAELTALQESQTYSYAFAPDSANIIGSKWVYKIKLNADGSVKRFKARLVAQGYTQRFGFDYAETHSPVMRSATFRWLLALTALNRWSTRMLDISSAYLYGDLEDPVYMKQPPGHDDGSGRVYKLKKGLYGLKQAGRIWYIKLVTHLKSRGYVQSNADPCVF 638
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A6A3A122_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A122_HIBSY) HSP 1 Score: 104 bits (259), Expect = 7.560e-23 Identity = 59/170 (34.71%), Postives = 88/170 (51.76%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLG----AVGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W+ A ++E L+ W+ VK P ++ V ++K K DG V R K RL+A G Q+ F SP ++ +VL+LA DW+LRHVD+ A+L +D F+E P + +V V +L +A+YG Q R W K+ +L GF S+ADP +F
Sbjct: 916 WKEAVQSEYDALLKNNTWSLVKLPAGRIPVGCKWLFKLKRNPDGSVNRYKARLIAKGYSQVTSYDFTDMFSPVLKFSTFNVVLALAVSNDWELRHVDVNNAFLNGDLDDVVFMEQPPGFEQVADDGTPLVCKLQRALYGLRQAPRNWHAKLRANLVQIGFVASRADPSLF 1085
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A4Y1RWQ7_PRUDU (Integrase catalytic domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RWQ7_PRUDU) HSP 1 Score: 102 bits (253), Expect = 4.720e-22 Identity = 59/168 (35.12%), Postives = 90/168 (53.57%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLGA--VGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W++A + E++ L +G W+ +P NK +V + +YK K DG V R K RLVA G Q F + SP + +VLSLA + W LR +D++ A+L +++ F+ P Y + V +L K++YG Q R W+ K T L GF+ SQ+DP +F
Sbjct: 441 WRQAMQEEIEALQSQGTWSLEPNPGNKNIVGSKWLYKIKKNSDGSVARYKARLVAQGFSQQPGLDFGETFSPVVRHTTVRLVLSLAAMNQWSLRQLDVKNAFLHGDLEEEVFMRQPQGYEDPAHPEYVCKLKKSLYGLKQAPRAWNAKFTGYLPALGFKISQSDPSLF 608
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A4Y1RLH4_PRUDU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RLH4_PRUDU) HSP 1 Score: 99.4 bits (246), Expect = 4.090e-21 Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLGA--VGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W +A E E+ L +G W V P N +V + IYK K DG V R K RLVA G Q + + SP + ++LSLA I W LR +D++ A+L +D+ +++ P + + V +L K++YG Q R W+ K T L + GF+ S +DP +F
Sbjct: 557 WIKAMEEEISALTMQGTWCLVPRPANTNIVGSKWIYKIKRNSDGTVSRYKARLVAQGFSQEAGFDYDETFSPVVRHTTVRLILSLASINGWSLRQLDVKNAFLHGDLDEEVYMKQPQGFEDSSHPEYVCKLQKSLYGLKQAPRAWNAKFTGYLPSLGFKMSHSDPSLF 724
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 97.8 bits (242), Expect = 1.440e-20 Identity = 53/168 (31.55%), Postives = 88/168 (52.38%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKY--REVLGAVGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W+ A + E LI+ W V+ P +K +V + ++K K G DGK++RCK RLVA G Q + +P S VL++ D +L +D++ A+L +++ F++ P + R+ +L K+IYG Q R W+ K+ L GF ++ ADPC++
Sbjct: 791 WKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGFINRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIY 958
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A6A3BR49_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BR49_HIBSY) HSP 1 Score: 97.4 bits (241), Expect = 1.920e-20 Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLG----AVGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W+ A AE + L G WT VK P+ + VV ++K K G + R K RLVA G Q+ F + SP + +VLSLA DW LR VD+ A++ + + F++ P + +V V RL+KA+YG Q R W K+ L GF++S AD +F
Sbjct: 573 WKAAVLAEFEALRKNGTWTLVKLPEGRSVVGYKWLFKLKKNPYGSINRYKARLVAKGYSQMPGYDFGETFSPVVRFTTLNIVLSLAVTNDWQLRQVDVNNAFMYGDLHEEVFMQQPPSFEQVAADGSPLVCRLEKAMYGLRQAPRNWHDKLKNYLLKIGFKESSADTSLF 742
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A151T234_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T234_CAJCA) HSP 1 Score: 96.3 bits (238), Expect = 4.680e-20 Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREVLGAVGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W +A + EL L WT P +K+ + +YK K DG +ER K RLV+ G Q++D F SP + M+L+LA I +W L+ +D+ A+L + + ++ +P G V L +++YG Q R W K+++ L G+ SQAD +F
Sbjct: 597 WVKAMKDELAALKMNNTWTLTNLPPDKVPIGCRWVYKVKHNADGTIERYKARLVSKGYNQLEDLDFLDTFSPVAKITTFRMLLALASINNWYLKQLDVNNAFLHGELHEEVYMHVPPGLTAQPGQVCLLKRSLYGLKQASRQWYAKLSSFLLLHGYHHSQADHSLF 762
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Match: A0A6A3AWP1_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AWP1_HIBSY) HSP 1 Score: 95.9 bits (237), Expect = 6.850e-20 Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 1
Query: 1 WQRAEEAELQDLIDKGVWTQVKSPKNKLVVSAMVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVLSLAEIQDWDLRHVDIE*AYLQAPIDQGSFVEIPVKYREV----LGAVGRLDKAIYGFLQPGRYWSMKVTTDLTTKGFEQSQADPCVF 498
W A E + L + G WT V+ PK+++VV +++ K DG V R K RLVA G Q+ F+ SP ++ VL++A W++RH+DI A+L + + F++ P + + V +L KA+YG Q R W K+ +L GF S+AD +F
Sbjct: 1031 WAAAVHEEYKALTNNGTWTLVRLPKDRMVVGCKWLFRVKRNPDGSVNRYKARLVAKGFSQVPGQDFKDTFSPVVRFSTFNTVLAVAVSNGWEIRHIDINNAFLNGDLSEEVFMQQPPGFEQEDECNRPLVCKLKKALYGLRQAPRNWHAKLKENLMQMGFVVSRADSSLF 1200 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39910.10339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39910.10339.1 >prot_H-paniculata_contig39910.10339.1 ID=prot_H-paniculata_contig39910.10339.1|Name=mRNA_H-paniculata_contig39910.10339.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp MVIYKRKIGEDGKVERCKCRLVAHGNRQIKDTHFQKASSPAPAAASTIMVback to top mRNA from alignment at H-paniculata_contig39910:5..502- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39910.10339.1 ID=mRNA_H-paniculata_contig39910.10339.1|Name=mRNA_H-paniculata_contig39910.10339.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=498bp|location=Sequence derived from alignment at H-paniculata_contig39910:5..502- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39910:5..502- >mRNA_H-paniculata_contig39910.10339.1 ID=mRNA_H-paniculata_contig39910.10339.1|Name=mRNA_H-paniculata_contig39910.10339.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig39910:5..502- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |