mRNA_H-paniculata_contig33938.9063.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A6B7EVT1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVT1_9PHAE) HSP 1 Score: 1186 bits (3067), Expect = 0.000e+0 Identity = 590/618 (95.47%), Postives = 601/618 (97.25%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 1854
MKNLKQKFDYVKINLASPERI EWAEKVLPNGE VGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWEC+CGLHK+KKKDVFFCEVCGVE+TESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLA PINELEA+IYNGKEPDQDEDV KYE+ FLSSFYDTEGEGFHYGKK QGAEILYHRL+ +DLK EIEKNRN MFFETAKK VEAAIKKIRIFENFLTTNTRPEWMVLY LPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVC SFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTT NRKNLRGSNNYFANFNEVISAY+QKQLQLHSA+WVRCPND+NLD+PLKFI KI LSKTT LVIYNNLQRKETI GELLVQYLRTTPGRIIFNQCVNDILNKSEVK
Sbjct: 1 MKNLKQKFDYVKINLASPERIQEWAEKVLPNGERVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECSCGLHKFKKKDVFFCEVCGVEVTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPINELEAVIYNGKEPDQDEDVAKYEEVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKNLDLKVEIEKNRNIMFFETAKKKVEAAIKKIRIFENFLTTNTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTRNRKNLRGSNNYFANFNEVISAYKQKQLQLHSAIWVRCPNDINLDNPLKFIKKINLSKTTQLVIYNNLQRKETIDGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 618
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: D1J788_ECTSI (DNA-directed RNA polymerase subunit beta' n=8 Tax=Ectocarpales TaxID=2877 RepID=D1J788_ECTSI) HSP 1 Score: 1134 bits (2934), Expect = 0.000e+0 Identity = 560/618 (90.61%), Postives = 586/618 (94.82%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 1854
MKNLKQKFDYVKINLASPERI EWAEK LPNGEIVGEVT+PETINYRTHKPEKGGLFCEKIFGPVKNWEC CGLHKYK+K+VFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLA PI++LEA+IYNGK+PDQDED+ KYEQ FLSSFYDTEGEGFHYGKK QGAEILYHRL+KIDLK EIE NRN MFF KK VE AIKKIRIFENFLTT TRPEWMVL+ +PVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVV+ TEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP LKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIY NEPFIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGR+IQLHPLVC SFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS SSGEPTIQPSQDMVLGFYYLTT NR NL GSNNYF++FNEVISAY+QKQ+Q+HS++WVRCPN++NLDSPLKFI KI LS L IYNNLQRKET+GGELLVQ+LRTTPGRIIFNQCVNDILNKSEVK
Sbjct: 1 MKNLKQKFDYVKINLASPERIKEWAEKTLPNGEIVGEVTQPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGLHKYKEKNVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPISKLEAVIYNGKKPDQDEDLAKYEQVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKKIDLKTEIEINRNVMFFSEVKKKVEVAIKKIRIFENFLTTGTRPEWMVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVISAYQQKQVQIHSSIWVRCPNEINLDSPLKFIKKINLSNNNTLTIYNNLQRKETMGGELLVQFLRTTPGRIIFNQCVNDILNKSEVK 618
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A0R6MFT6_UNDPI (DNA-directed RNA polymerase subunit beta' n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6MFT6_UNDPI) HSP 1 Score: 1043 bits (2698), Expect = 0.000e+0 Identity = 514/614 (83.71%), Postives = 555/614 (90.39%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILNK 1842
MKN+KQ+F+YVKINLASPERI EWAEK+LPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKN EC CG +K+K+ D CE+CGVELTESRVRRHRMGYI LLSPVVHIWYLKGSPS LS +L I +LE ++YNGKEP+QD+DV KY+ FF YDTEGEGF YGKK QGAEILY RL++IDLK EI NRN MF K VE AIK+IRIFENFLTTNTRPEWMVL+ LPVLPPGIRP+VKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPFIIY+LLSQGLSHSIK+AKKIIY N+ FIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVCP+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT NR L+GSNNYF+NFNEVI+AYEQKQLQLHS++WVRCP D+ LD+ LKF+ I L L IYNNLQRKET G+LLVQY+RTTPGRIIFNQC+N+ILNK
Sbjct: 1 MKNMKQQFEYVKINLASPERIKEWAEKILPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNCECTCGRYKHKEPDTLICEICGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSFLSTILDSSITKLEGVVYNGKEPEQDQDVSKYDDFF----YDTEGEGFVYGKKRQGAEILYDRLKRIDLKVEIASNRNIMFCSNVTKAVEDAIKRIRIFENFLTTNTRPEWMVLHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFIIYKLLSQGLSHSIKKAKKIIYSNQSFIWYLTEEILRKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMGLKGSNNYFSNFNEVITAYEQKQLQLHSSIWVRCPKDITLDTELKFLKTIVLDNLQTLHIYNNLQRKETKDGQLLVQYIRTTPGRIIFNQCINNILNK 610
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A8F0F9J3_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9J3_9PHAE) HSP 1 Score: 1011 bits (2615), Expect = 0.000e+0 Identity = 501/614 (81.60%), Postives = 544/614 (88.60%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILNK 1842
MKN+KQ+F+YVKINLASP+ I EWAEK LPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWEC CG +K + + CE CGVELTESRVRRHRMGYI LLSPVVHIWYLKGSPSLLSA+L I LE++IYNGKEP QD+D+ KY FF YD EGF + KK QGAEILY L+KI+LK EIE NRN M A K +E AIK++RIFENFLTTNTRPEW +L+ LPVLPPGIRP+VKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAP+VVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF+IY+LLSQ LSHSIKRAKKIIY N PFIW+LTEEIL+KHPIILNRAPTLHRLGVQAFDP+L+RGRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT NR L+G+NNYF++FNEVISAYEQKQLQ+HS++WVRCP D+ LD LKF+ I LS L IYNNLQRKET GELLVQY+RTTPGRIIFN+CVNDILNK
Sbjct: 1 MKNMKQQFEYVKINLASPDCIKEWAEKTLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGRYKQRDLSIVVCETCGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSLLSAILYSSITRLESVIYNGKEPGQDQDISKYTDFF----YDAMDEGFVFSKKSQGAEILYDSLKKINLKEEIEDNRNIMLCSKAVKKIEDAIKRVRIFENFLTTNTRPEWTILHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLIYKLLSQELSHSIKRAKKIIYSNRPFIWHLTEEILRKHPIILNRAPTLHRLGVQAFDPILVRGRAIQLHPLVCAAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMQLKGANNYFSDFNEVISAYEQKQLQVHSSIWVRCPTDITLDIQLKFLKTIVLSNNENLHIYNNLQRKETKTGELLVQYIRTTPGRIIFNECVNDILNK 610
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: D1GJH3_FUCVE (DNA-directed RNA polymerase subunit beta' n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH3_FUCVE) HSP 1 Score: 993 bits (2566), Expect = 0.000e+0 Identity = 483/615 (78.54%), Postives = 548/615 (89.11%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRC--PNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILN 1839
MKN+K++F+Y++INLASP+RI EW+EK+LP GEI+GEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACG +K+K +++ CE+CGVELTESRVRRHRMGYIKLL+PVVHIWYLKGSPS LS +L I+++EAI+Y+GKEP+++ ++ KYE FF Y+ +G GF YGKK QG EILY +L++IDLK EIE NRN MF K VEAAIK+IRIFENFLTTNTRPEWM+L LPVLPPGIRP+V+LDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPS+VI TEKRMIQE+VDTLIDNGKRGSK++D N+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L LNQCGLPYEMAIELFLPFIIYRLLSQGL HSIK+AKKIIY N+ FIWYLT+EIL KHPIILNRAPTLHRLGVQAFDP+L+ GRAIQLHPLVCP+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT NR L+G+NNYF+NF+EV+SAY+QKQLQ+HS +WVRC N + LD+ LKF I L + +YNNLQRKET G+LLVQY+RTTPGRIIFNQC+NDILN
Sbjct: 1 MKNVKEQFEYLRINLASPKRIKEWSEKILPTGEIIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHKDEEIAICEICGVELTESRVRRHRMGYIKLLTPVVHIWYLKGSPSFLSIVLDSSISQIEAIVYSGKEPEKEHNILKYEDFF----YENQGPGFVYGKKPQGTEILYDKLKRIDLKVEIEINRNIMFCSNVTKVVEAAIKRIRIFENFLTTNTRPEWMILNFLPVLPPGIRPMVQLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIMTEKRMIQESVDTLIDNGKRGSKVVDTNRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPELHLNQCGLPYEMAIELFLPFIIYRLLSQGLCHSIKKAKKIIYSNQSFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPILVNGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRIGLKGTNNYFSNFHEVLSAYQQKQLQIHSTIWVRCFNSNQIFLDNELKFCKTIALGNDINIHVYNNLQRKETSQGKLLVQYIRTTPGRIIFNQCLNDILN 611
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A141BSD2_9PHAE (DNA-directed RNA polymerase subunit beta' n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD2_9PHAE) HSP 1 Score: 985 bits (2547), Expect = 0.000e+0 Identity = 478/613 (77.98%), Postives = 550/613 (89.72%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILN 1839
MK ++++F+Y++INLASP+RI EW++K LP GE++GEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACG +K++ ++ CE CGVELTESRVRRHRMGYIKLL+PVVHIWYLKG+PS L+++L PI+ +E IIY+GKEP+QD++V KYE FF + + GF +GKK QGAEILY +L+ IDLK EIE NRN MF T K VEAAIK+IRIFENFL+TNTRPEWM+L LPVLPPGIRP+VKL+NGRFATSDLNELYRKIIIRNKRLKRLLSVHAPS+VI TEKRMIQE+VDTLIDNGKRGSK++DAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L+LNQCGLPYEMAIELFLPFIIY+LLSQGL HSIK+AKKII+ N+PFIWYLT+EIL KHPIILNRAPTLHRLGVQAFDPVL++GRAIQLHPLVCP+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSP++GEP IQPSQDM+LGFYYLTTHNR L+G+NNYF++F+EV+SAY+ KQL++HS +WVRC N++ LDS LKFI I + L IYNNLQRKET G+ LVQY+RTTPGRIIFNQC+NDILN
Sbjct: 1 MKTIEEQFEYIRINLASPQRIKEWSQKTLPTGEVIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHRDDEISICETCGVELTESRVRRHRMGYIKLLTPVVHIWYLKGAPSFLASILDSPISRIETIIYSGKEPEQDQEVLKYEDFFP----ENQLPGFVFGKKPQGAEILYDKLKNIDLKIEIETNRNIMFCSTVTKVVEAAIKRIRIFENFLSTNTRPEWMILQFLPVLPPGIRPMVKLENGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIITEKRMIQESVDTLIDNGKRGSKVVDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPKLQLNQCGLPYEMAIELFLPFIIYKLLSQGLCHSIKKAKKIIHSNQPFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPVLVKGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPATGEPNIQPSQDMILGFYYLTTHNRLGLKGANNYFSSFHEVLSAYQHKQLKVHSPIWVRCSNELLLDSKLKFIKTIN-NNNNKLHIYNNLQRKETSEGKFLVQYIRTTPGRIIFNQCLNDILN 608
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A8F0JZT2_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT2_9PHAE) HSP 1 Score: 981 bits (2535), Expect = 0.000e+0 Identity = 484/614 (78.83%), Postives = 542/614 (88.27%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILNK 1842
MK +KQ+F+YVKINLASPERI EW EK LPNG+IVGEV EPETINYRTHKPEK GLFCEKIFGPVKNWEC CG +K+K++D CEVCGVE+TESRVRRHRMGYIKLL+PV+HIWYLKGSPS LSA+LA + +E ++Y G++P+ YE FF + EGF YGKK +G EILY RL+KI+LK EIE NRN MF A K VE AIK+IRI+ENFLTTNTRPEWM+L LPVLPPG+RP+VKLD+GRFATSDLNELYRKII+RNKRL RLLSVHAP++VI+TEKRMIQEAVDTLIDNGKRGSK+LDAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF+I++LL QGL++SIKRAKKIIY N FIWYLTEE LKKHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVCP+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQP+QDMVLGFYYLT +NR L+G+NNYF+NFNEV+ AYEQKQLQLHS+VWVR PN++ LD+PL ++ ITL L IYNNLQRKET+ G+LLVQYLRTTPGRIIFNQCVNDILNK
Sbjct: 1 MKKVKQEFEYVKINLASPERIKEWGEKTLPNGKIVGEVIEPETINYRTHKPEKDGLFCEKIFGPVKNWECTCGRYKHKEEDTLICEVCGVEVTESRVRRHRMGYIKLLAPVLHIWYLKGSPSYLSAILASSVTNIEGLVY-GRDPE----FFDYEDFFFND------EGFVYGKKLEGTEILYDRLKKINLKTEIESNRNIMFCSNATKVVEDAIKRIRIYENFLTTNTRPEWMILNFLPVLPPGLRPMVKLDSGRFATSDLNELYRKIILRNKRLGRLLSVHAPNIVITTEKRMIQEAVDTLIDNGKRGSKVLDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLQLNQCGLPYEMAIELFLPFLIHKLLFQGLANSIKRAKKIIYSNRSFIWYLTEETLKKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPTQDMVLGFYYLTANNRMQLKGANNYFSNFNEVVIAYEQKQLQLHSSVWVRLPNNITLDTPLTYLKTITLKSNENLHIYNNLQRKETMDGKLLVQYLRTTPGRIIFNQCVNDILNK 603
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A8F0JYE1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE1_9PHAE) HSP 1 Score: 890 bits (2299), Expect = 0.000e+0 Identity = 445/611 (72.83%), Postives = 509/611 (83.31%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDI 1833
M KQ F VKINLASPERI W+EK LP+GEI+GEV E ETINYRTHKPEKGGLFCEKIFGPVKNWECACG +K K K+ CEVC VE+ +SRVRRHRMGYI LL+PVVH+WYLKGSPS LSA+L P+ +E ++Y GK D +YEQF + E F K+ +GAEI+Y +L+KIDLK EIE NR MF K+ E AIK+IR+FENFLTTNT+PEWMVL LPVLPPGIRP++++ NGRFATSDLNELYRKIIIRN RL RL+SVHAP+++I TEKRMIQE+VD LIDNGKRG K+LD++KRPLKSLADIIEGKQGRFR NLLGKR DYSGRSVIIVGPQL LNQCGLPYEMAIELFLPFII++LL QGL +SIK+AKKII+ N+ FIW+L +EIL +HPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVCP+FNADFDGDQMAVHIPLSFESQLETRLCLLA NNFLSP++GE I PSQDMVLGFYYLTT NR L+G+NNYF+NFNEVISAY+QKQL +HS++WVRC ++++L + LKF I L L IYNNLQRKET G+ LVQYLRTTPGRI+FNQCVNDI
Sbjct: 1 MNKNKQDFVSVKINLASPERIKAWSEKELPSGEIIGEVLESETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKQKTKNDLICEVCSVEVIDSRVRRHRMGYISLLTPVVHVWYLKGSPSFLSAILESPVKTIEQVVY-GKTFGLD--FSRYEQFLFTE------EDFATEKRLEGAEIIYDQLQKIDLKTEIEMNREIMFCSNNVKSTEDAIKRIRLFENFLTTNTKPEWMVLNCLPVLPPGIRPMIQMANGRFATSDLNELYRKIIIRNNRLGRLISVHAPNMIIKTEKRMIQESVDALIDNGKRGEKVLDSHKRPLKSLADIIEGKQGRFRLNLLGKRTDYSGRSVIIVGPQLALNQCGLPYEMAIELFLPFIIHKLLFQGLVYSIKKAKKIIFSNDSFIWFLLKEILIQHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLATNNFLSPATGEANIHPSQDMVLGFYYLTTQNRMKLKGANNYFSNFNEVISAYQQKQLHVHSSIWVRCSDNIDLYTQLKFFKTIELQNGNRLHIYNNLQRKETKNGDFLVQYLRTTPGRILFNQCVNDI 602
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A8E6D698_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D698_9PHAE) HSP 1 Score: 846 bits (2186), Expect = 1.070e-303 Identity = 419/621 (67.47%), Postives = 505/621 (81.32%), Query Frame = 1
Query: 1 MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYN---------GKEPDQDEDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDIL 1836
+K +K++F+YVKINLASPE+I W EK LP GE+VGEVTE ETINYRT+KPEKGGLFCEKIFGP+KNWEC CG + D CE CGVE+TES+VRRHRMGYI+LL PV HIWYLKGSPS LS +L + LE +IY +E ++DE++ + FF G + +G LY+RL+KI+L+ EIEK+R M + K E AIK+IRI ENFL+TNT+PEWM+LY LPV+PPG+RPI+KL+NGRFA+SDLNELYR+IIIRNKRL RL+SVHAPSVV++TE RMIQE++DTLIDNGKRG+ ++D++KRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF++++L+ QGL++SI +AKKIIY N+ FIW L +EIL +HP+ILNRAPTLHRLGVQAFD +L+ GRAIQLHPLVCP+FNADFDGDQMAVHIPLSFESQ+ETRLCLLAPNNFLSP++G+P IQP+QDMVLGFYYLT N NL+GSN+YF +F EVI AY QKQL +HS++WVRCP ++ LD L +TL K + + IY +LQRKET G LLVQYLRTTPGR+IFNQ VN++L
Sbjct: 3 IKKMKRQFEYVKINLASPEQIRGWGEKYLPTGEVVGEVTESETINYRTYKPEKGGLFCEKIFGPIKNWECGCGQYTQSFDDGIICENCGVEVTESKVRRHRMGYIRLLVPVAHIWYLKGSPSFLSIVLKQSVKTLEEMIYGKDLKEEGFLDEENEEDEEIINKKHFFS-------------GNQLEGINSLYNRLKKINLRDEIEKSREIMLCAKSAKPFEDAIKRIRILENFLSTNTKPEWMLLYFLPVIPPGLRPIIKLENGRFASSDLNELYRRIIIRNKRLGRLMSVHAPSVVLNTETRMIQESIDTLIDNGKRGATVVDSHKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLMHKLIYQGLANSINKAKKIIYNNKSFIWGLLKEILGRHPVILNRAPTLHRLGVQAFDAILVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQIETRLCLLAPNNFLSPATGDPVIQPTQDMVLGFYYLTAQNHTNLKGSNHYFGSFEEVILAYSQKQLHIHSSIWVRCPVNIELDIKLDLPKIVTL-KDSRIKIYKDLQRKETHKGHLLVQYLRTTPGRVIFNQEVNNLL 609
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Match: A0A2I4Q2A7_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A7_9PHAE) HSP 1 Score: 831 bits (2146), Expect = 1.030e-297 Identity = 416/612 (67.97%), Postives = 492/612 (80.39%), Query Frame = 1
Query: 10 LKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGLHKYKKKDV-FFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLALPINELEAIIYNGKEPDQD-EDVEKYEQFFLSSFYDTEGEGFHYGKKHQGAEILYHRLEKIDLKAEIEKNRNRMFFETAKKTVEAAIKKIRIFENFLTTNTRPEWMVLYNLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCPSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTHNRKNLRGSNNYFANFNEVISAYEQKQLQLHSAVWVRCPNDVNLDSPLKFINKITLSKTTYLVIYNNLQRKETIGGELLVQYLRTTPGRIIFNQCVNDILN 1839
++Q++ ++INLAS ERI +W+E LPNGEIVGE+TE +TINYRTHKPE+ GLFC+KIFGP+K+WEC CGL+K + CEVCGV +TESRVRRHRMGYI LL PVVHIWYL+G P+ LS +L P+ +LE IY GK +D + E++E+F L EGE + QGAEI+Y +L+++DLK EI+ NR M + K VE AIK++RIFENFL T T+PEWM+ LPVLPPG+RPIV+LDNGR ATSDLNE YRKI+IR +RL RLLSV APS++I TEKRMIQE+VD LIDNGKRG K+LD +KRPLKSLA++IEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL LNQCGLPYEMA+ELFLPF+I+++ L+ SIK AKKIIY N+ FIWYL +EIL KHPIILNRAPTLHRLGVQAFDPVL+ GRAIQLHPLVCP+FNADFDGDQMAVHIPLS ESQLETRLCLLA NNFLSP++GEP I PSQDMVLGFYYLTT NR L+G+NNYF+ FNEVISAY+QK+L LHS++WVRCP V L+ L + L L IY N Q+KET G+ L QYLRTTPGRIIFN+ +N+ILN
Sbjct: 1 MRQEYQCIQINLASSERIKKWSEITLPNGEIVGEITESDTINYRTHKPERNGLFCQKIFGPIKDWECICGLYKNEVTQAGLICEVCGVAITESRVRRHRMGYINLLHPVVHIWYLRGIPNFLSIILKAPLKKLEETIY-GKNLSRDLTNYEEFEEFIL------EGELLSAQNQLQGAEIIYKKLKRLDLKEEIKNNRLIMVSSKSTKAVEDAIKRVRIFENFLATKTKPEWMIFNVLPVLPPGLRPIVQLDNGRLATSDLNEFYRKILIRTQRLGRLLSVQAPSMIIFTEKRMIQESVDALIDNGKRGPKVLDIHKRPLKSLAEMIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLHLNQCGLPYEMAVELFLPFLIHKIFFLKLAGSIKTAKKIIYSNKSFIWYLLKEILNKHPIILNRAPTLHRLGVQAFDPVLVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSLESQLETRLCLLATNNFLSPATGEPNILPSQDMVLGFYYLTTQNRIKLKGNNNYFSTFNEVISAYQQKKLHLHSSIWVRCPKTVKLEMELVLLKIHILPNKDKLYIYQNFQKKETFDGKFLTQYLRTTPGRIIFNRRINEILN 605 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33938.9063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33938.9063.1 >prot_H-paniculata_contig33938.9063.1 ID=prot_H-paniculata_contig33938.9063.1|Name=mRNA_H-paniculata_contig33938.9063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=619bp MKNLKQKFDYVKINLASPERILEWAEKVLPNGEIVGEVTEPETINYRTHKback to top mRNA from alignment at H-paniculata_contig33938:409..2265+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33938.9063.1 ID=mRNA_H-paniculata_contig33938.9063.1|Name=mRNA_H-paniculata_contig33938.9063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1857bp|location=Sequence derived from alignment at H-paniculata_contig33938:409..2265+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33938:409..2265+ >mRNA_H-paniculata_contig33938.9063.1 ID=mRNA_H-paniculata_contig33938.9063.1|Name=mRNA_H-paniculata_contig33938.9063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3714bp|location=Sequence derived from alignment at H-paniculata_contig33938:409..2265+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |