prot_H-paniculata_contig22964.6153.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: D7FV80_ECTSI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV80_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.020e-31 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0
Query: 1 MDGVGTRFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFIT 58
M+G GTRFEMELELMNCLASPEYLHYLAQGGYLDD AF+RFLEYLQYFKRPEYAKFIT
Sbjct: 1 MEGSGTRFEMELELMNCLASPEYLHYLAQGGYLDDRAFIRFLEYLQYFKRPEYAKFIT 58
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.630e-30 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
Query: 1 MDGVGTRFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFIT 58
M+G GTRFEMELELMNCLASPEYLHYLAQ GYLDD AF+RFLEYLQYFKRPEYAKFIT
Sbjct: 1 MEGSGTRFEMELELMNCLASPEYLHYLAQSGYLDDRAFVRFLEYLQYFKRPEYAKFIT 58
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A7S3XZ41_HETAK (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ41_HETAK) HSP 1 Score: 87.8 bits (216), Expect = 1.720e-20 Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0
Query: 1 MDGVGTRFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFI 57
+DG +RFE+ELE + CL+SPEYLHYLAQ Y +DPAF+ FL YLQY++RPEYAKFI
Sbjct: 40 LDGGHSRFEVELEFVQCLSSPEYLHYLAQNKYFEDPAFINFLHYLQYWRRPEYAKFI 96
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: D8SC37_SELML (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SC37_SELML) HSP 1 Score: 78.2 bits (191), Expect = 1.320e-17 Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 1 MDGVGTRFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFI 57
+DG RF +ELE + CLA+P Y+HYLAQ Y DD AF+ +L+YLQY++RPEYAKFI
Sbjct: 9 VDGGRQRFLLELEFVQCLANPTYIHYLAQNRYFDDEAFVNYLKYLQYWRRPEYAKFI 65
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A176VRV6_MARPO (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VRV6_MARPO) HSP 1 Score: 80.1 bits (196), Expect = 1.750e-17 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 2 DGVGTRFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFIT 58
DG RFE+ELE + CLA+P Y+HYLAQ Y DD AF+ +L+YLQY++RPEYAKFI
Sbjct: 17 DGGRQRFELELEFVQCLANPTYIHYLAQNRYFDDEAFVGYLKYLQYWQRPEYAKFIV 73
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A835Z5G5_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G5_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.860e-17 Identity = 34/51 (66.67%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 7 RFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFI 57
RFE+ELE + CLASPEYLH+LAQ Y DDPAF+ FL+YL Y++RP+YAK++
Sbjct: 25 RFEVELEFVQCLASPEYLHFLAQQRYFDDPAFMAFLQYLTYWRRPQYAKYL 75
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A6G1LXD9_ORBOL (Mediator of RNA polymerase II transcription subunit 31 n=6 Tax=Orbiliaceae TaxID=47021 RepID=A0A6G1LXD9_ORBOL) HSP 1 Score: 77.0 bits (188), Expect = 6.240e-17 Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 0
Query: 6 TRFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFIT 58
TRFE+ELE + CLA+P YL+YLAQG YL D AFL++LEYL Y+++PEY KF++
Sbjct: 11 TRFEVELEFVQCLANPFYLNYLAQGKYLQDDAFLQYLEYLDYWRQPEYVKFLS 63
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A6U6IBL1_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IBL1_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.220e-16 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0
Query: 7 RFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFIT 58
RFE+ELE + CLASP YLH+LA G L D +FL FLEYL+Y+ RPEYA+FIT
Sbjct: 33 RFELELEFVQCLASPAYLHHLATSGLLSDSSFLSFLEYLRYWSRPEYARFIT 84
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A4V1IX78_9FUNG (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IX78_9FUNG) HSP 1 Score: 73.6 bits (179), Expect = 2.010e-15 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
Query: 7 RFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFIT 58
RFE+ELE + LA+P YLHYLAQ Y DDP F+ +LEYL Y+++PEYAKF+
Sbjct: 25 RFELELEFVQSLANPFYLHYLAQQDYFDDPCFVAYLEYLAYWRKPEYAKFVV 76
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Match: A0A061DDR2_BABBI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Babesia bigemina TaxID=5866 RepID=A0A061DDR2_BABBI) HSP 1 Score: 73.6 bits (179), Expect = 2.280e-15 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 7 RFEMELELMNCLASPEYLHYLAQGGYLDDPAFLRFLEYLQYFKRPEYAKFI 57
RFE ELE + CLA+P YLHYLA+ GY +D F ++ YLQYF+RPEY KFI
Sbjct: 29 RFEAELEFVQCLANPHYLHYLAKAGYFEDQRFRAYIVYLQYFRRPEYVKFI 79 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22964.6153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig22964.6153.1 ID=prot_H-paniculata_contig22964.6153.1|Name=mRNA_H-paniculata_contig22964.6153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bpback to top |