prot_H-paniculata_contig21217.5563.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: W7T9C2_9STRA (Copia-like retrotransposable element (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9C2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.370e-11 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C C++ K +K+ T ++ E LELVHTD+ GP++ +S G R+AI F DDY+R R YT+R+KSE+L
Sbjct: 5 CGTCERAKQTKKSFGTKSRERAKEPLELVHTDVLGPIEVESLGGARYAIGFTDDYTRWRVVYTMRRKSESL 75
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 67.0 bits (162), Expect = 2.660e-11 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C AC KGK ++ K R + LLE+VHTDIAGP D S G R+ + F+DD+SR+ Y L++KSEAL
Sbjct: 365 CEACIKGKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEAL 435
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: A0A0A9W6P7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W6P7_LYGHE) HSP 1 Score: 66.6 bits (161), Expect = 3.630e-11 Identity = 29/71 (40.85%), Postives = 47/71 (66.20%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVDKSFRG-CRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C AC KGK+ ++P + + +T ++L+L+H+D+ GP+ G CR+ I F+DD+SR+ Y +R KSE L
Sbjct: 297 CDACIKGKNIRKPFPKFSKQETKDILDLIHSDVCGPLPVESNGKCRYFITFIDDFSRKAVVYFMRSKSEVL 367
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: W7SYS1_9STRA (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7SYS1_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 6.540e-11 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C C++ K +K T ++ E LELVHTD+ GPV+ +S G R+AI F DDY+R R Y ++ KSE+L
Sbjct: 19 CGTCERAKHTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESL 89
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: A0A7D9DC69_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DC69_PARCT) HSP 1 Score: 65.1 bits (157), Expect = 1.250e-10 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C AC +GKS + P K E Q+ + L+LVH+D+AGP+ +SF G R+ + F+DDYSR Y + KSE L
Sbjct: 433 CEACAEGKSHRAPFKPVGEVQSKKRLQLVHSDVAGPMKTESFGGARYFVTFIDDYSRCVTVYPITHKSEVL 503
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.360e-10 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C C++ K +K+ T ++ E LELVHTD+ GPV+ +S G R+AI F DDY+R R Y ++ KSE+L
Sbjct: 103 CGTCERAKQTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESL 173
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: K8YS61_NANGC (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YS61_NANGC) HSP 1 Score: 63.2 bits (152), Expect = 2.470e-10 Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C+ C++ K +K+ T ++ E LELVHTD+ GPV+ +S G R+AI F DDY+R R Y ++ KS++L
Sbjct: 37 CATCERAKHTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSDSL 107
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: W7TGQ6_9STRA (Retrotransposon unclassified n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGQ6_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.720e-10 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C C++ K +K T ++ E LELVHTD+ GPV+ +S G R+AI F DDY+R R Y ++ KSE+L
Sbjct: 57 CGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESL 127
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: W7TIQ5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIQ5_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.180e-10 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C C++ K +K T ++ E LELVHTD+ GPV+ +S G R+AI F DDY+R R Y ++ KSE+L
Sbjct: 57 CGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESL 127
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Match: W7T9I7_9STRA (Copia-like retrotransposable element n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9I7_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.180e-10 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 1 CSACDKGKSSKEPVKTYREDQTTELLELVHTDIAGPVD-KSFRGCRFAIIFVDDYSRRRKAYTLRQKSEAL 70
C+ C++ K +K T ++ E LELVHTD+ GPV+ +S G R+AI F DDY+R R Y ++ KSE+L
Sbjct: 107 CATCERAKHTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESL 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21217.5563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig21217.5563.1 ID=prot_H-paniculata_contig21217.5563.1|Name=mRNA_H-paniculata_contig21217.5563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bpback to top |