mRNA_H-paniculata_contig20030.5149.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A2H9ZU53_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZU53_9ASPA) HSP 1 Score: 209 bits (532), Expect = 1.520e-59 Identity = 128/379 (33.77%), Postives = 208/379 (54.88%), Query Frame = 1
Query: 10 NVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSNDCTTPKNNEKRQLHERIGH--VRDLPTVARQQGI----RLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDE 1125
NVF+VP+ + ++LSV ++V+ G F D T KD I+ D +Q + +++ + ++ K NE H R GH + L + ++ + +++ +C C GK S++ R R T PLELV++++ GP+ +S G R+ I+F++DY+RM VY L+ KS+AL A K F+ V R++ IK LR ++ GE+ F+ FC E GI +E +A TP+Q+GVA R R+I EMAR + + ++WAE+ +AVY LN++P ++ LYE W G ++ HL++FGC AYV S R K++D++ +F+GY +YR+Y P +K + +SR+V F+E
Sbjct: 49 NVFFVPKLAHNLLSVGQLVASGYSILF---------DNATCKI-----KDKESCQIIAD---IQMTSNNMF-PLRISSIGNHALIVKKMNESTLWHFRYGHLHINGLKLLNQKNMVIGLPKINDLENICEECLYGKQSRKSFLIGRTCRATHPLELVYSDLCGPMRIESLSGSRYFILFIDDYTRMNWVYFLKNKSEALEAFKIFKAFVERQSGYFIKVLRTDRGGEFLSHEFKAFCEENGIHRELTAPYTPEQNGVAERKNRTIVEMARSLLKAKGIPNQFWAESVATAVYLLNISPTKAILNRTLYEVWKGRKSRISHLKIFGCIAYVYVNSHDRHKLEDKSEKCIFIGYCPQSKAYRLYNPCSKKLIISRSVIFEE 409
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 217 bits (553), Expect = 3.360e-59 Identity = 109/285 (38.25%), Postives = 163/285 (57.19%), Query Frame = 1
Query: 295 HERIGHVRDLPTVARQQGIRLSGKL-------GVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVDK-SFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDE 1125
H+R+GH T+ R L L +C C+ GK K K R TE L+LVHT++ GP+ S G ++ ++F++DY+RM V+ L+ KS +F+ V E LQ+KRLR + EYT F++FC ++GI+ + + TPQQ+GV+ R R++ EMAR + + + +WAEA ++VY LNL P ++ G +E WHG TP ++HL+VFGC Y + +R K+D ++ G+FLGY YRIY P K + +SRNV+FDE
Sbjct: 397 HKRLGHF-SYSTLKRMSSNDLVKNLPAIQDNANLCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI) HSP 1 Score: 208 bits (530), Expect = 1.560e-57 Identity = 120/384 (31.25%), Postives = 202/384 (52.60%), Query Frame = 1
Query: 1 IVCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSNDCTTPKNNEKRQLHERIGHVRD--LPTVARQQGIRLSGKL----GVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPV-DKSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDEED 1131
++ NV Y PE + ++ SV +++ G F + + + + +V ++E S+ T N + H R GH+ L + +++ +R ++ VC C GK SK+ + R TEPLELVH ++ GP+ ++ GG ++ ++FV+DYSRM VY L+ KS+A +F+ V ++ +K LR ++ GE+T F Q+C + GI +E +A TP+Q+GVA R R+I EMAR + + + +WAEA +AVY +NL+P ++ YE W G+ P ++HL++FGC YV+ + +R K+++++ +F+GY +YR+Y P V +SRN F+EED
Sbjct: 211 LISNVLYTPELAHNLFSVGQLLLSGFTILFDESHCIITEKATGHVLAKVNMAENHMFPLVFSKLE------------------SHAMVTMTKNASQLWHLRYGHLHTAGLRLLNQKEMVRGLPRIDVDGAVCEGCMYGKQSKRSFPVGQSWRATEPLELVHADLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKAYRVYNPATGKVIVSRNTVFNEED 576
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464) HSP 1 Score: 210 bits (535), Expect = 4.780e-57 Identity = 126/386 (32.64%), Postives = 200/386 (51.81%), Query Frame = 1
Query: 4 VCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSNDCT----TPKNNEKRQLHERIGHVR--DLPTVARQQGIR----LSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDEE 1128
+ NV+YVP ++ILS+ +++ +G + + KD+ L + D K + K L ND N H R GH+ L ++++ +R +S +C C GK ++ K R +PLEL+HT+I GP+ S G + ++F++D+SR VY L+ KS+A K+F+ V +E+ L IK +R ++ GE+T + F+ FC + GI++ + +PQQ+GVA R R+I +MAR + + N+ + +WAEA AVY LN +P RS G E W G P + HLRVFG AY + R K+DD++ A +F+GYD + Y++Y P ++ +SR+V FDEE
Sbjct: 39 ISNVYYVPNMKNNILSLGQLLEKGYDIHM---------------------KDHSLS--IRDNKNNLITKVPMSKNRMFLLNIQNDVAKCLKACYKNVSWLWHLRFGHLNFGGLELLSKKDMVRGLPFISHPNQLCEGCLLGKQFRKSFPKKSSSRAQKPLELIHTDICGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEAFEVFKKFKAAVEKESGLHIKAMRSDRGGEFTSREFQNFCEKHGIRRPLTVPRSPQQNGVAERKNRTILDMARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDEE 401
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS) HSP 1 Score: 210 bits (535), Expect = 8.850e-57 Identity = 128/387 (33.07%), Postives = 210/387 (54.26%), Query Frame = 1
Query: 1 IVCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDE--VEVQAAKRTIGKQVKVLRLFSNDCTTPKNNEKRQL-HERIGHV-----RDLPTVARQQGI-RLS--GKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPV-DKSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDE 1125
++ +V+YVP +++S+ ++ +G+ + D H ++ L+R+++ V AA VK R C + L H+R+GH+ + L G+ +LS G G+C C +GK +++ + K R + L+LVHT+I GP+ S G R+ I F++DYSR + L KS+AL A K+F+ RE L + LR ++ GEY F+ +C E GIK++ +AA TPQQ+G+A R RSI MAR M+ +++ RR+W EA + AV+ LN +P + E+W P ++H+RVFGC AY + ++R K+D+++ VF+G ++ +YR+Y P+ K + +SR+VRFDE
Sbjct: 354 LISSVYYVPGLKSNLMSIGQLQQKGLR---------IVIDEDVCEIWHKEQRRLLMRSVMSKNRLFVVLAA-------VKEARDTEEGCFQVTEEKMEDLWHKRLGHLSHSGMQSLVEKKMVNGLPQLSHNGDGGLCDICMRGKQNRENIPKKSSWRASRALQLVHTDICGPIAPTSASGKRYIINFIDDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDE 724
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A151TGQ2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TGQ2_CAJCA) HSP 1 Score: 206 bits (525), Expect = 1.280e-55 Identity = 128/385 (33.25%), Postives = 210/385 (54.55%), Query Frame = 1
Query: 4 VCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSNDCTTPKNNEKRQL---HERIGHV--RDLPTVARQQGIR----LSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDEE 1128
+ NV+YVP +ILS+ +++ +G YD I + + S +D R I +V + ++ VL + S+ K K Q H R GH+ + L ++++ +R ++ VC C GK + K + R +PLEL+HT++ GP+ +S G + ++F++D+SR VY L+ KS+ K+F+ V +E+ L IK LR ++ GE+T K F+++C + GI+++ + +PQQ+GVA R R+I EMAR + + + + +WAEA AVY N +P RS +G E W G P + HLRVFG A+V ++R K+DD++ +F+GYD + Y++Y P ++ +SRNV FDEE
Sbjct: 323 ISNVYYVPSMKSNILSLGQLLEKG-------------YD-IQLKNNNLSIRDNTSRFIA----KVPMTRN----RMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEE 685
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A151RPT4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RPT4_CAJCA) HSP 1 Score: 206 bits (525), Expect = 1.890e-55 Identity = 128/385 (33.25%), Postives = 210/385 (54.55%), Query Frame = 1
Query: 4 VCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSNDCTTPKNNEKRQL---HERIGHV--RDLPTVARQQGIR----LSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDEE 1128
+ NV+YVP +ILS+ +++ +G YD I + + S +D R I +V + ++ VL + S+ K K Q H R GH+ + L ++++ +R ++ VC C GK + K + R +PLEL+HT++ GP+ +S G + ++F++D+SR VY L+ KS+ K+F+ V +E+ L IK LR ++ GE+T K F+++C + GI+++ + +PQQ+GVA R R+I EMAR + + + + +WAEA AVY N +P RS +G E W G P + HLRVFG A+V ++R K+DD++ +F+GYD + Y++Y P ++ +SRNV FDEE
Sbjct: 389 ISNVYYVPSMKSNILSLGQLLEKG-------------YD-IQLKNNNLSIRDNTSRFIA----KVPMTRN----RMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEE 751
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: UPI000A29CC5E (uncharacterized protein LOC110224828 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29CC5E) HSP 1 Score: 204 bits (520), Expect = 4.550e-55 Identity = 127/387 (32.82%), Postives = 204/387 (52.71%), Query Frame = 1
Query: 4 VCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSND---CTTPKNNEKRQL-HERIGHVR--DLPTVARQQGIR----LSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDEED 1131
+ NV+Y+P +ILS+ +++ +G YD I + + S +D I K ++ K + ND C E+ L H R GH+ L +++++ +R ++ VC C GK K K R +PLEL+HT++ GP+ KS G + ++F++D+SR VY L+ KS+ K+F+ V +E+ L IK +R ++ GE+T K F ++C + GI+++ + +PQQ+GVA R R+I EMAR + + + + WAEA AVY LN +P +S +G E W G P + HLRVFG A+ ++R K+DD++ +F+GYD + Y++Y P K +SRNV FDEE+
Sbjct: 390 ISNVYYIPSMKTNILSLGQLLEKG-------------YD-IRLKDNNLSIRDQESNLIT---------KVSMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLKLLSKKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSTRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKESGLTIKSMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNVVFDEEE 753
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: UPI001B3556EB (LOW QUALITY PROTEIN: uncharacterized protein LOC100794549 n=1 Tax=Glycine max TaxID=3847 RepID=UPI001B3556EB) HSP 1 Score: 205 bits (521), Expect = 6.740e-55 Identity = 124/387 (32.04%), Postives = 200/387 (51.68%), Query Frame = 1
Query: 4 VCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSND---CTTPKNNEKRQL-HERIGHVR--DLPTVARQQGIRLSGKLG----VCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDEED 1131
+ NV+YVP ++ILS+ +++ +G + H LR + + AK + K L ND C + L H R GH+ L +A+++ +R+ + +C C GK ++ K R T+PLEL+HT++ GP+ SFG ++ ++F++DYSR VY L+ KS+ K+F+ V +E+ L IK +R ++ GE+T F ++C + GI++ + +PQQ+GVA R R+I M R + + M + +WAEA AVY N +P RS + E W G P + HL+VFG AY ++R K+DD++ VF+GYD Y++Y P ++ + +SR+V FDEED
Sbjct: 870 ISNVYYVPNMKNNILSLGQLLEKGYDI-------------------HLKEHSLFLRDCRHNLI----AKVPMSKNRMFLLNIQNDVAKCLKACYTDSSWLWHLRFGHLNFDGLERLAKKEMVRVLPSINHPDQLCEGCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTWVYFLKEKSEVFENFKKFKALVEKESGLSIKAMRSDRGGEFTSNKFNKYCEDHGIRRPLTMPRSPQQNGVAERKNRTILNMVRSMLKSKKMPKEFWAEAVACAVYLTNRSPTRSVHEKTPQEAWSGRKPGISHLKVFGSIAYTHVPDEKRTKLDDKSEKYVFVGYDSRSKGYKLYNPNSRKIVISRDVEFDEED 1233
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: C0JJI2_SOYBN (Copia-type polyprotein n=3 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C0JJI2_SOYBN) HSP 1 Score: 203 bits (517), Expect = 1.590e-54 Identity = 124/386 (32.12%), Postives = 201/386 (52.07%), Query Frame = 1
Query: 1 IVCNVFYVPEASDSILSVKRMVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKRTIGKQVKVLRLFSNDCTTPKNNEKRQL---HERIGHVR--DLPTVARQQGIRLSGKLG----VCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVDK-SFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ*GEYTGKPFRQFCSEIGIKQEFSAA*TPQQDGVAGRTWRSIFEMARVNMITVNMGRRYWAEAARSAVYCLNLAPMRSHNGGILYEKWHGETPKLDHLRVFGCTAYVMFQSQQRCKIDDEA*AGVFLGYDEDRPSYRIYKPKNKSVQLSRNVRFDEE 1128
++ +V+YVP+ +ILS+ ++V +G E + WL + K ++ R ++ L + +N+ K + K + H R GH+ L ++ ++ ++ ++ +C AC GK +++ K R EPL+LV+T++ GP++ S G ++ ++F++DYSR VY L+ KS+A A K F+ V +E+ IK LR ++ GE+T K F +FC + GI++ + +PQQ+GVA R R+I M R + NM + +WAEA AVY N +P ++ E W G P++DHLRVFG AY Q R K+DD + VF+GYD Y++Y P N +SR+V F EE
Sbjct: 81 LITDVYYVPKLKSNILSLGQLVEKGYEIHMKDCCLWLRDKNSNL-----IAKVFMSRN-----------------RMFTLNIKTNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGEEKMVKGMPQINHPNQLCEACLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVYFLKQKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNEFCEKYGIRRPLTVPRSPQQNGVAERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFKLDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSRDVEFYEE 444 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20030.5149.1 >prot_H-paniculata_contig20030.5149.1 ID=prot_H-paniculata_contig20030.5149.1|Name=mRNA_H-paniculata_contig20030.5149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp MVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAKback to top mRNA from alignment at H-paniculata_contig20030:1833..2969- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20030.5149.1 ID=mRNA_H-paniculata_contig20030.5149.1|Name=mRNA_H-paniculata_contig20030.5149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1137bp|location=Sequence derived from alignment at H-paniculata_contig20030:1833..2969- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20030:1833..2969- >mRNA_H-paniculata_contig20030.5149.1 ID=mRNA_H-paniculata_contig20030.5149.1|Name=mRNA_H-paniculata_contig20030.5149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig20030:1833..2969- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |