prot_H-paniculata_contig20030.5149.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20030.5149.1
Unique Nameprot_H-paniculata_contig20030.5149.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: UPI00098E8473 (uncharacterized protein LOC109839251 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E8473)

HSP 1 Score: 83.6 bits (205), Expect = 3.060e-15
Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 0
Query:   79 HERIGH-----VRDLPTVARQQGIRLSGKL-GVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPN 199
            H+R+GH     V+ L +     G+    ++ GVCS+C KGK  +         R T+PLEL+HT++ GP+  +S  G ++ I F++D+SRM  VY LRLKS+A    ++F+  V R+  L+IK++R N
Sbjct:  306 HKRLGHLNFQSVKTLQSREMVYGLPTIEEIEGVCSSCMKGKQHRGEFPMEGAWRATKPLELIHTDLCGPMKTESLAGNKYFITFIDDFSRMPWVYFLRLKSEAFTVFQKFKAMVERQTDLEIKKIRSN 433          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: UPI001CC80C07 (uncharacterized protein LOC122665624 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC80C07)

HSP 1 Score: 82.4 bits (202), Expect = 8.460e-15
Identity = 50/147 (34.01%), Postives = 87/147 (59.18%), Query Frame = 0
Query:   64 SND--CTTPKNNEKRQLHERIGHV--RDLPTVARQQGIRLSGKLG-----VCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPV-DKSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ 200
            SND  C   + NE    H+R+GH+  ++L  + +  G+R   K+      VC  C+KGK ++  + K +E   ++PL+L+HT++ GP+  ++ GG ++ ++ +++YSRM  V+ L+ K +AL  LK F++ V  E    IK +R NQ
Sbjct:  543 SNDDSCMISQENETTLWHKRLGHINFKNLIKLRKNNGVRDLPKIKNLTNHVCGPCQKGKQTRA-IYKSKEHYASKPLDLIHTDLCGPMRTQAIGGEKYFMLLIDEYSRMTWVFFLKDKIEALHCLKMFKKMVENETGKTIKYIRSNQ 688          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: K8YS61_NANGC (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YS61_NANGC)

HSP 1 Score: 79.3 bits (194), Expect = 1.180e-14
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   79 HERIGHVR--------DLPTVARQQGIRLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDV 185
            H+R GH+         ++      +GI+   K GVC+ CE+ K +K+        R  EPLELVHT++ GPV+ +S GG R+AI F +DY+R R VY ++ KS +L  LK++ +D+
Sbjct:    5 HQRFGHINYEYLRQMGEIDDTGVPKGIK---KPGVCATCERAKHTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSDSLDCLKRYIQDM 117          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A151S1T9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S1T9_CAJCA)

HSP 1 Score: 79.0 bits (193), Expect = 3.890e-14
Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 0
Query:   62 LFSNDCTTPKNNEKRQLHERIGHVRD--LPTVARQ---QGIRLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLR 197
            L + D     + E    H R+ H+ +  L  +A++   QG++ S +L  CS C  GK ++   KK+   R +E L+LVH+++ GP+  KSF G  + +IF++D SR   VYTL+ K + L   KQF   V R++  ++KR+R
Sbjct:  115 LVAKDSVNAMDMEASLWHRRLSHISEKGLNCLAQKDVLQGLK-SAELEKCSHCMAGKQTRVSFKKHPPSRKSELLQLVHSDVCGPLKVKSFSGALYFVIFIDDCSRKLWVYTLQRKDQVLERFKQFHALVERQSGKKLKRIR 255          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.700e-14
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   79 HERIGHVR--------DLPTVARQQGIRLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDV 185
            H+R GH+         ++      +GI+   K GVC  CE+ K +K+        R  EPLELVHT++ GPV+ +S GG R+AI F +DY+R R VY ++ KS++L  LK++ +D+
Sbjct:   71 HQRFGHINYEYLKQMGEIDDTGVPKGIK---KPGVCGTCERAKQTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDM 183          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: W7TGQ6_9STRA (Retrotransposon unclassified n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGQ6_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.360e-14
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   79 HERIGHVR--------DLPTVARQQGIRLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDV 185
            H+R GH+         ++      +GI+   K GVC  CE+ K +K+        R  EPLELVHT++ GPV+ +S GG R+AI F +DY+R R VY ++ KS++L  LK++ +D+
Sbjct:   25 HQRFGHMNYEYLRQMGEIDGTGVPKGIK---KPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDM 137          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: W7T9I7_9STRA (Copia-like retrotransposable element n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9I7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.020e-14
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   79 HERIGHVR--------DLPTVARQQGIRLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDV 185
            H+R GH+         ++      +GI+   K G+C+ CE+ K +K+        R  EPLELVHT++ GPV+ +S GG R+AI F +DY+R R VY ++ KS++L  LK++ +D+
Sbjct:   75 HQRFGHINYEYLRQMGEIDDTGVPKGIK---KPGICATCERAKHTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDM 187          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A5N6M7D6_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M7D6_9ASTR)

HSP 1 Score: 79.7 bits (195), Expect = 7.420e-14
Identity = 45/138 (32.61%), Postives = 79/138 (57.25%), Query Frame = 0
Query:   67 CTTPKNNEKRQLHERIGHV--RDLPTVARQQGIR----LSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVDK-SFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLR 197
            C     +E +  H R+ HV  + + T+ +++ +R    +SGK  +C  C  GK +++ + K    R+TE LEL+HT++ GP+   S  G R+ ++F++D +R   VY L+ K ++  A K+F+  V  E+  +IK LR
Sbjct:  433 CMQVTEDETQVWHRRLAHVNYKAIKTMQQKEMVRGLPEVSGKAMICETCNVGKQNRENIPKKSWWRSTEKLELIHTDLCGPITPASQSGKRYVLVFIDDLTRKTWVYLLQFKHESFDAFKRFKVAVENESGCKIKALR 570          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: W7TIQ5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIQ5_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.280e-13
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   79 HERIGHVR--------DLPTVARQQGIRLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVD-KSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDV 185
            H+R GH+         ++      +GI+   K GVC  CE+ K +K+        R  EPLELVHT++ GPV+ +S GG R+AI F +DY+R R VY ++ KS++L  LK++ +D+
Sbjct:   25 HQRFGHMNYEYLRQMGEIDGTGVPKGIK---KPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDM 137          
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Match: A0A5C3FVP2_PSEA2 (Uncharacterized protein n=2 Tax=Pseudozyma antarctica TaxID=84753 RepID=A0A5C3FVP2_PSEA2)

HSP 1 Score: 79.0 bits (193), Expect = 1.440e-13
Identity = 45/125 (36.00%), Postives = 76/125 (60.80%), Query Frame = 0
Query:   79 HERIGH-----VRDLPTVARQQGIRLSGKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPV-DKSFGGCRFAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLR 197
            H+R+GH     +RD+   A + GI+L  +   C  CE GK++K R  K+   R+ +PLELV++++ GP+ D +  G R+A+ F++DYS+    Y +  KS+ L  L+ F+  + ++   Q+KRLR
Sbjct:  457 HDRLGHPGLERLRDVAKYAERLGIKLPTRDTKCETCEVGKSTK-RAFKHAHARSQKPLELVYSDVVGPMPDTTSQGYRYAVTFIDDYSKYSTAYLMSHKSEVLDHLQDFKTTMEKQVGHQMKRLR 580          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20030.5149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00098E84733.060e-1538.28uncharacterized protein LOC109839251 n=1 Tax=Aspar... [more]
UPI001CC80C078.460e-1534.01uncharacterized protein LOC122665624 n=1 Tax=Telop... [more]
K8YS61_NANGC1.180e-1438.79Retrovirus-related pol polyprotein from transposon... [more]
A0A151S1T9_CAJCA3.890e-1435.21Retrovirus-related Pol polyprotein from transposon... [more]
W7T174_9STRA5.700e-1438.79Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
W7TGQ6_9STRA6.360e-1438.79Retrotransposon unclassified n=1 Tax=Nannochlorops... [more]
W7T9I7_9STRA7.020e-1437.93Copia-like retrotransposable element n=1 Tax=Nanno... [more]
A0A5N6M7D6_9ASTR7.420e-1432.61Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
W7TIQ5_9STRA1.280e-1338.79Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
A0A5C3FVP2_PSEA21.440e-1336.00Uncharacterized protein n=2 Tax=Pseudozyma antarct... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 126..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20030contigH-paniculata_contig20030:2307..2909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20030.5149.1mRNA_H-paniculata_contig20030.5149.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20030 1833..2969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20030.5149.1 ID=prot_H-paniculata_contig20030.5149.1|Name=mRNA_H-paniculata_contig20030.5149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MVSQGMEAYFGSERRWLYYDGITIPFEHASRKDYLLRTIVGDEVEVQAAK
RTIGKQVKVLRLFSNDCTTPKNNEKRQLHERIGHVRDLPTVARQQGIRLS
GKLGVCSACEKGKASKQRVKKYREGRTTEPLELVHTEIAGPVDKSFGGCR
FAIIFVNDYSRMRQVYTLRLKSKALWALKQFERDVARENALQIKRLRPNQ
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf