Gvermi13700.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi13700.t1 vs. uniprot
Match: A0A1Z5KE40_FISSO (Splicing factor 3B subunit 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE40_FISSO) HSP 1 Score: 199 bits (507), Expect = 1.100e-56 Identity = 97/148 (65.54%), Postives = 113/148 (76.35%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAHRAGHLSDALRQALGMETTGGGSFSGRTTPP 268
LI AVPGTVPV RHWGRKRKYLQGKRGFEKPPFQLPDF+ TGI ++RD+VA+ +A SAKQ+NRAR APK+GA+DVDYRTLHDAFFK QTKP ++T FGD YYEGKE + + K G LS LR+ALGM + T+PP
Sbjct: 187 LIELKAVPGTVPVSRHWGRKRKYLQGKRGFEKPPFQLPDFIVRTGITDIRDSVAADEAKMSAKQKNRARVAPKMGAIDVDYRTLHDAFFKYQTKPKSLTKFGDTYYEGKELEVNIKIKPGGPLSTKLREALGMTS--------ETSPP 326
BLAST of Gvermi13700.t1 vs. uniprot
Match: A0A7S1DEI7_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DEI7_CYCTE) HSP 1 Score: 190 bits (482), Expect = 5.630e-56 Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAHRAGHLSDALRQALGM 253
LI + GTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDF+ TGI +RD +A +++ QSAKQ+NR+R APK+GA+DVDYRTL++AFFK QTKP MT GDLYYEGKE + +K LS LR+ALGM
Sbjct: 32 LIYLKGISGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFIVKTGITAIRDTLADNESSQSAKQKNRSRVAPKMGAMDVDYRTLYEAFFKHQTKPSTMTRMGDLYYEGKELETRNKIQPGAPLSPQLREALGM 164
BLAST of Gvermi13700.t1 vs. uniprot
Match: B7GAP7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAP7_PHATC) HSP 1 Score: 196 bits (499), Expect = 7.320e-56 Identity = 97/171 (56.73%), Postives = 113/171 (66.08%), Query Frame = 0
Query: 114 SKRKIRDLICPS-------------------------------AVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAHRAGHLSDALRQALGM 253
SKRK+R+L+ PS A GTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDF+ TGI E+RD V +++D SAKQ+NR+R APK+GA+DVDY+TLHDAFFK QTKP +T FGD YYEGKE + +K G LS LR ALGM
Sbjct: 113 SKRKLRELLRPSVAELKRRVLRPDLVEAHDVTAADPDFLIELKAAAGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFIIKTGITEIRDTVMEAESDMSAKQKNRSRVAPKMGAIDVDYKTLHDAFFKHQTKPANLTKFGDTYYEGKELEVQAKVQPGGPLSQKLRDALGM 283
BLAST of Gvermi13700.t1 vs. uniprot
Match: A0A7S3P7K2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7K2_9STRA) HSP 1 Score: 183 bits (465), Expect = 7.610e-51 Identity = 90/148 (60.81%), Postives = 110/148 (74.32%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAHRAGHLSDALRQALGMETTGGGSFSGRTTPP 268
LI +VPGTVPVPR+WGRKRKYLQGKRGFEKPPF+LPDF+ TGI E+RD+ A+ Q + +Q+NRAR + K GAVDVDYRTL+DAFFK QTKP +T FGD+YYEGKE + + + R G LS LR+ALGM + T+PP
Sbjct: 155 LIELKSVPGTVPVPRNWGRKRKYLQGKRGFEKPPFKLPDFILKTGIAEVRDSAAADQEKMTIRQKNRARVSGKTGAVDVDYRTLYDAFFKHQTKPTNLTQFGDMYYEGKELEVDT-SRRPGELSAKLREALGMAS--------ETSPP 293
BLAST of Gvermi13700.t1 vs. uniprot
Match: A0A7S2LBG3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBG3_9STRA) HSP 1 Score: 176 bits (447), Expect = 6.810e-49 Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQ-ASSKAHRAGHLSDALRQALGM 253
LI +PGTVPVPRHWGRKRKYLQGKRG EKPPF LPDF+ TGI ++RDA A A S KQ+NRAR + K VDVDYRTL++AFF+ QTKP ++T FGDLYYEG+E + A S R G +S+ LR+ALGM
Sbjct: 90 LIYLKGIPGTVPVPRHWGRKRKYLQGKRGVEKPPFALPDFIVKTGICDVRDATAEDDAKMSVKQKNRARVSGKGAGVDVDYRTLYEAFFQHQTKPESLTDFGDLYYEGREYETARSSNFRPGFMSERLREALGM 223
BLAST of Gvermi13700.t1 vs. uniprot
Match: K0SIL6_THAOC (PSP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SIL6_THAOC) HSP 1 Score: 178 bits (452), Expect = 2.590e-48 Identity = 84/134 (62.69%), Postives = 100/134 (74.63%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQAS-SKAHRAGHLSDALRQALGM 253
L+ +P TVPVPRHWGRKRKYLQGKRG EKPPF LPDF+ TGI ++RDA +A QS KQ+NR R + + VDVDYRTL++AFF QTKP MT FGDLYYEGKE + + S R GH+SDAL++ALGM
Sbjct: 179 LVYLKGIPNTVPVPRHWGRKRKYLQGKRGIEKPPFGLPDFIVKTGICDVRDATKEDEAKQSVKQKNRMRVSGRGAGVDVDYRTLYEAFFHHQTKPAGMTGFGDLYYEGKEFETTKSTRFRVGHMSDALKEALGM 312
BLAST of Gvermi13700.t1 vs. uniprot
Match: A0A448Z0H3_9STRA (PSP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0H3_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.530e-46 Identity = 83/148 (56.08%), Postives = 103/148 (69.59%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAHRAGHLSDALRQALGMETTGGGSFSGRTTPP 268
LI ++P T PVP HWGRKRKYLQGKRG +K P+QLPDF+ TGI ++RD +A QS KQ+NR R PK+GA+DVDY+ L++AFFK QTKP +T++GDLYYEGKE + S+ G S ALR ALGM G + SG PP
Sbjct: 213 LIALKSIPHTTPVPFHWGRKRKYLQGKRGLDKVPYQLPDFIIKTGIADVRDTAMEDEAAQSIKQKNRGRVNPKMGAMDVDYKVLYEAFFKYQTKPTGLTSWGDLYYEGKETENSTDIKPGGPFSKALRIALGM----GDNPSGNIPPP 356
BLAST of Gvermi13700.t1 vs. uniprot
Match: B8CCL9_THAPS (PSP domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCL9_THAPS) HSP 1 Score: 169 bits (429), Expect = 2.820e-45 Identity = 81/134 (60.45%), Postives = 99/134 (73.88%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAH-RAGHLSDALRQALGM 253
LI V GTVPVPRHWGRKRKYLQGKRG EKPPF LPDF+ TGI ++R A A + S KQ+NR R + + G VDVDYRTL++AFF+ QTKP +T FGDLYYEGKE + + + R G++S+ LR+ALGM
Sbjct: 198 LIYLKGVEGTVPVPRHWGRKRKYLQGKRGVEKPPFALPDFIVKTGICDVRSATAEDENKMSIKQKNRLRVSGRGGGVDVDYRTLYEAFFQHQTKPEKLTQFGDLYYEGKEYETTKSTNFRPGYMSERLREALGM 331
BLAST of Gvermi13700.t1 vs. uniprot
Match: A0A1E7EW45_9STRA (DUF382-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW45_9STRA) HSP 1 Score: 161 bits (407), Expect = 5.280e-45 Identity = 80/148 (54.05%), Postives = 101/148 (68.24%), Query Frame = 0
Query: 121 LICPSAVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAHRAGHLSDALRQALGMETTGGGSFSGRTTPP 268
LI A+P T PVP HWGRKRKYLQGKRG EK F+LPDF+ TGI +RD + Q+AKQ NR R PK+G++DVDY+ L++AFFK QTKP +T++GDLYYEGKE + ++ G LS +L+ ALGM GGS + PP
Sbjct: 40 LIALKAIPHTTPVPFHWGRKRKYLQGKRGLEKTLFKLPDFIIKTGIANIRDTAMEEEEKQNAKQTNRGRVNPKMGSMDVDYKILYEAFFKYQTKPKNLTSWGDLYYEGKELETNTDIKPGGTLSKSLQIALGM----GGS---KNAPP 180
BLAST of Gvermi13700.t1 vs. uniprot
Match: A0A7S4AFR5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AFR5_9STRA) HSP 1 Score: 169 bits (428), Expect = 6.020e-45 Identity = 87/186 (46.77%), Postives = 111/186 (59.68%), Query Frame = 0
Query: 114 SKRKIRDLICPS-------------------------------AVPGTVPVPRHWGRKRKYLQGKRGFEKPPFQLPDFLAATGIGELRDAVASSQADQSAKQRNRARTAPKLGAVDVDYRTLHDAFFKQQTKPVAMTTFGDLYYEGKECQASSKAHRAGHLSDALRQALGMETTGGGSFSGRTTPP 268
SKRK+R+L+ PS ++ T PVP HWGRKRKYLQGKRG +K P+QLPDF+ TGI ++RD +A+QS KQ+NR RT PK+GA+DVDY+ L++AFFK QTKP +T++GDLYYEGKE + S+ G S ALR ALGM + S PP
Sbjct: 171 SKRKLRELVRPSVADLKRRVERPDLVEAHDVTAADPDFLIELKSISHTTPVPFHWGRKRKYLQGKRGLDKVPYQLPDFIIKTGIADVRDTAMEDEANQSIKQKNRGRTNPKMGAMDVDYKVLYEAFFKYQTKPTDLTSWGDLYYEGKELENSTDIKPGGPFSKALRIALGMGDNSDNNNSVNNIPP 356 The following BLAST results are available for this feature:
BLAST of Gvermi13700.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi13700.t1 ID=Gvermi13700.t1|Name=Gvermi13700.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=270bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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