Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10539.t1.stop1 | Ggra10539.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000904_pilon 55445..55447 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10539.t1.start1 | Ggra10539.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000904_pilon 56718..56720 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10539.t1 ID=Ggra10539.t1|Name=Ggra10539.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=354bp
MVTGTITESRHTPDRTTYISSSCDRPVPSIQPSVSFGPSGIPKTSSITRS
PLAFHSEDGDFGLLDIFVDSKDFELHETVRSLRFTAAATSISNLFPPTPR
STITLPPSSISEFNQLECGSGVKVVEELDDHLGRNLKQAGKSTATPMEVQ
QASEEDAAPAADIAKPLSPEAIAKARCQLDAFMSEPVTPPSAEPRDISET
ESRRPFSFSPRSRKIFEKLSIRRERKLPSRQAEGDTLETDDDEAASSGPQ
PLSKMISGLERLFSRISSTSKPAEQNGHIPSAPKPSSASPAASNPTAQRR
MKSILTSYCTLQSHTFQSPNTASQIALIFPELSLKVHQLFLITLSNTATP
SVR* back to topspliced messenger RNA >Ggra10539.t1 ID=Ggra10539.t1|Name=Ggra10539.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1062bp|location=Sequence derived from alignment at tig00000904_pilon:55445..56720- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGTAACCGGCACAATCACTGAAAGTCGACATACTCCCGACAGAACAAC
ATATATCTCATCTTCTTGTGACCGTCCCGTTCCCAGCATACAACCATCCG
TGTCATTTGGTCCAAGCGGTATCCCGAAGACGTCGTCAATTACACGTTCT
CCTTTGGCTTTTCATTCGGAAGATGGTGACTTCGGTTTGCTTGACATATT
CGTCGACAGCAAGGACTTTGAATTGCACGAAACGGTGAGAAGTCTTAGGT
TCACCGCTGCTGCCACAAGTATTAGCAATCTATTTCCGCCAACGCCAAGG
TCCACCATCACATTACCACCAAGCTCCATTAGCGAGTTTAATCAATTGGA
ATGTGGCAGTGGCGTGAAAGTCGTAGAGGAACTGGACGACCATCTTGGCC
GCAATCTCAAACAGGCAGGGAAGTCGACTGCCACGCCAATGGAGGTGCAG
CAAGCAAGCGAAGAAGATGCAGCTCCAGCTGCAGACATTGCAAAGCCTCT
CAGTCCAGAGGCAATAGCGAAAGCTCGATGCCAGCTTGACGCCTTTATGA
GTGAGCCCGTCACCCCACCTTCTGCAGAACCAAGGGATATCTCTGAGACC
GAAAGTCGTAGACCATTTTCATTCTCGCCACGTTCCCGAAAGATATTTGA
GAAACTATCTATTCGGCGAGAGAGAAAGCTTCCGTCGAGACAAGCGGAGG
GGGATACCCTGGAAACCGATGATGATGAGGCTGCATCTTCTGGACCTCAG
CCCTTGTCCAAAATGATCTCTGGGCTTGAACGTTTGTTCTCGAGGATTTC
CAGTACATCCAAACCTGCAGAGCAGAATGGTCATATCCCCTCGGCGCCCA
AGCCTTCATCGGCATCGCCAGCGGCCTCGAACCCCACTGCACAGAGGAGA
ATGAAGTCGATATTGACCTCCTACTGTACGCTGCAATCACATACATTCCA
GTCCCCAAACACGGCTTCCCAAATAGCTCTGATATTCCCAGAGCTTTCGC
TCAAAGTACATCAGCTTTTCTTGATAACTTTGTCTAACACGGCAACTCCT
TCAGTAAGATAG back to topprotein sequence of Ggra10539.t1 >Ggra10539.t1 ID=Ggra10539.t1|Name=Ggra10539.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=354bp
MVTGTITESRHTPDRTTYISSSCDRPVPSIQPSVSFGPSGIPKTSSITRS
PLAFHSEDGDFGLLDIFVDSKDFELHETVRSLRFTAAATSISNLFPPTPR
STITLPPSSISEFNQLECGSGVKVVEELDDHLGRNLKQAGKSTATPMEVQ
QASEEDAAPAADIAKPLSPEAIAKARCQLDAFMSEPVTPPSAEPRDISET
ESRRPFSFSPRSRKIFEKLSIRRERKLPSRQAEGDTLETDDDEAASSGPQ
PLSKMISGLERLFSRISSTSKPAEQNGHIPSAPKPSSASPAASNPTAQRR
MKSILTSYCTLQSHTFQSPNTASQIALIFPELSLKVHQLFLITLSNTATP
SVR* back to topmRNA from alignment at tig00000904_pilon:55445..56720- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10539.t1 ID=Ggra10539.t1|Name=Ggra10539.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1276bp|location=Sequence derived from alignment at tig00000904_pilon:55445..56720- (Gracilaria gracilis GNS1m male)
ATGGTAACCGGCACAATCACTGAAAGTCGACATACTCCCGACAGAACAAC
ATATATCTCATCTTCTTGTGACCGTCCCGTTCCCAGCATACAACCATCCG
TGTCATTTGGTCCAAGCGGTATCCCGAAGACGTCGTCAATTACACGTTCT
CCTTTGGCTTTTCATTCGGAAGATGGTGACTTCGGTTTGCTTGACATATT
CGTCGACAGCAAGGACTTTGAATTGCACGAAACGGTGAGAAGTCTTAGGT
TCACCGCTGCTGCCACAAGTATTAGCAATCTATTTCCGCCAACGCCAAGG
TCCACCATCACATTACCACCAAGCTCCATTAGCGAGTTTAATCAATTGGA
ATGTGGCAGTGGCGTGAAAGTCGTAGAGGAACTGGACGACCATCTTGGCC
GCAATCTCAAACAGGCAGGGAAGTCGACTGCCACGCCAATGGAGGTGCAG
CAAGCAAGCGAAGAAGATGCAGCTCCAGCTGCAGACATTGCAAAGCCTCT
CAGTCCAGAGGCAATAGCGAAAGCTCGATGCCAGCTTGACGCCTTTATGA
GTGAGCCCGTCACCCCACCTTCTGCAGAACCAAGGGATATCTCTGAGACC
GAAAGTCGTAGACCATTTTCATTCTCGCCACGTTCCCGAAAGATATTTGA
GAAACTATCTATTCGGCGAGAGAGAAAGCTTCCGTCGAGACAAGCGGAGG
GGGATACCCTGGAAACCGATGATGATGAGGCTGCATCTTCTGGACCTCAG
CCCTTGTCCAAAATGATCTCTGGGCTTGAACGTTTGTTCTCGAGGATTTC
CAGTACATCCAAACCTGCAGAGCAGAATGGTCATATCCCCTCGGCGCCCA
AGCCTTCATCGGCATCGCCAGCGGCCTCGAACCCCACTGCACAGAGGAGA
ATGAAGTCGATGTTCGCAAAGTGGAGAGGTGAAGTTAGGAAGTTTTTGGA
CAGATTCGTAGATTGACCTCCTACTGTACGGTAAGTGCCGATGGCCAAGT
TTGGGTTTGGCTTACTATGATGATCATCATGATGATCATCATCGCGCGTG
TCGTTTATGACTGCTCATGCAGAAAGAAGATGCCAATGTATTCCTCAGGT
CTAACCCATTCCCAAGTTCGGCGCTCTTCCTAAACAAAACTTAGCTGCAA
TCACATACATTCCAGTCCCCAAACACGGCTTCCCAAATAGCTCTGATATT
CCCAGAGCTTTCGCTCAAAGTACATCAGCTTTTCTTGATAACTTTGTCTA
ACACGGCAACTCCTTCAGTAAGATAG back to topCoding sequence (CDS) from alignment at tig00000904_pilon:55445..56720- >Ggra10539.t1 ID=Ggra10539.t1|Name=Ggra10539.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1062bp|location=Sequence derived from alignment at tig00000904_pilon:55445..56720- (Gracilaria gracilis GNS1m male)
ATGGTAACCGGCACAATCACTGAAAGTCGACATACTCCCGACAGAACAAC
ATATATCTCATCTTCTTGTGACCGTCCCGTTCCCAGCATACAACCATCCG
TGTCATTTGGTCCAAGCGGTATCCCGAAGACGTCGTCAATTACACGTTCT
CCTTTGGCTTTTCATTCGGAAGATGGTGACTTCGGTTTGCTTGACATATT
CGTCGACAGCAAGGACTTTGAATTGCACGAAACGGTGAGAAGTCTTAGGT
TCACCGCTGCTGCCACAAGTATTAGCAATCTATTTCCGCCAACGCCAAGG
TCCACCATCACATTACCACCAAGCTCCATTAGCGAGTTTAATCAATTGGA
ATGTGGCAGTGGCGTGAAAGTCGTAGAGGAACTGGACGACCATCTTGGCC
GCAATCTCAAACAGGCAGGGAAGTCGACTGCCACGCCAATGGAGGTGCAG
CAAGCAAGCGAAGAAGATGCAGCTCCAGCTGCAGACATTGCAAAGCCTCT
CAGTCCAGAGGCAATAGCGAAAGCTCGATGCCAGCTTGACGCCTTTATGA
GTGAGCCCGTCACCCCACCTTCTGCAGAACCAAGGGATATCTCTGAGACC
GAAAGTCGTAGACCATTTTCATTCTCGCCACGTTCCCGAAAGATATTTGA
GAAACTATCTATTCGGCGAGAGAGAAAGCTTCCGTCGAGACAAGCGGAGG
GGGATACCCTGGAAACCGATGATGATGAGGCTGCATCTTCTGGACCTCAG
CCCTTGTCCAAAATGATCTCTGGGCTTGAACGTTTGTTCTCGAGGATTTC
CAGTACATCCAAACCTGCAGAGCAGAATGGTCATATCCCCTCGGCGCCCA
AGCCTTCATCGGCATCGCCAGCGGCCTCGAACCCCACTGCACAGAGGAGA
ATGAAGTCGATATTGACCTCCTACTGTACGCTGCAATCACATACATTCCA
GTCCCCAAACACGGCTTCCCAAATAGCTCTGATATTCCCAGAGCTTTCGC
TCAAAGTACATCAGCTTTTCTTGATAACTTTGTCTAACACGGCAACTCCT
TCAGTAAGATAG back to top
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