Ggra10539.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10539.t1
Unique Name	Ggra10539.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	354

Homology

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BLAST of Ggra10539.t1 vs. uniprot
Match: A0A2V3IN94 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN94_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 1.220e-40
Identity = 117/279 (41.94%), Postives = 158/279 (56.63%), Query Frame = 0

Query:   34 VSFGPSGIPKTSSITRSPLAFHSEDGDFG-LLDIFVDSKDFELHETVRSLRFTAAATSISNLFPPTPRS-TITLPPSSISEFNQLECGSGVKVVEELDDHLGRNLKQAGKS--TATPMEVQQASEEDAAPAADIAKPLSPEAIAKARCQLDAFMSEPVTPPSAEPRDISETESRRPFSFSPRSRKIFEKLSIRRERKLPSRQAEGDTLETDDDEAASSG------PQPLSKMISGLERLFSRISSTSKPAEQNGHIPSAPKPSSASPAASNPTAQRRMK 302
            VSF P G+PK+SSIT SP A   EDGDFG LLD+ VDS  FE+ ++ RS+RFT A++ +S+LFP +PRS ++ LP S  S     E    VKV +E   +  ++      S  + TPM+          PA+  AK LSPE +   +  L+AF  EPVTPP     +  E E  RPF   P+S K+FEK SIRRE+    R     T+E D+ E  + G      P PL ++ SGL+RLFSR+S+ S+  E+N      P+ SSA+P    PT  R+ K
Sbjct:   27 VSFSPRGVPKSSSITCSPSALRDEDGDFGFLLDMTVDSGPFEMDDSTRSIRFTLASSQVSHLFPQSPRSQSLQLPTSLKSVDGSEENDLSVKVSQERVSNYWQSETHESTSDQSGTPMD----GVTGLLPASIEAKTLSPETLTVVKRDLEAFSIEPVTPPGTRGNNSDEREHWRPFPTPPKSLKLFEKFSIRREK----RDRSPSTMEYDEQELVNGGAQSPDSPTPLRRLTSGLDRLFSRVSNISRTDERNNG--DGPR-SSAAPEV--PTPPRKTK 292

The following BLAST results are available for this feature:

BLAST of Ggra10539.t1 vs. uniprot

BLAST of Ggra10539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IN94	1.220e-40	41.94	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..235

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000904_pilon	contig	tig00000904_pilon:55445..56720 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10539.t1	Ggra10539.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000904_pilon 55445..56720 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10539.t1 ID=Ggra10539.t1|Name=Ggra10539.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=354bp
MVTGTITESRHTPDRTTYISSSCDRPVPSIQPSVSFGPSGIPKTSSITRS
PLAFHSEDGDFGLLDIFVDSKDFELHETVRSLRFTAAATSISNLFPPTPR
STITLPPSSISEFNQLECGSGVKVVEELDDHLGRNLKQAGKSTATPMEVQ
QASEEDAAPAADIAKPLSPEAIAKARCQLDAFMSEPVTPPSAEPRDISET
ESRRPFSFSPRSRKIFEKLSIRRERKLPSRQAEGDTLETDDDEAASSGPQ
PLSKMISGLERLFSRISSTSKPAEQNGHIPSAPKPSSASPAASNPTAQRR
MKSILTSYCTLQSHTFQSPNTASQIALIFPELSLKVHQLFLITLSNTATP
SVR*